RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 GGA3Q9NZ52 723 aa20.72■□□□□ 0.91
SDR39U1-217ENST00000556249 COL4A1P02462 1669 aa20.71■□□□□ 0.91
SDR39U1-217ENST00000556249 PRPF38BQ5VTL8 546 aaKnown RBP20.71■□□□□ 0.91
SDR39U1-217ENST00000556249 CDCA5Q96FF9 252 aa20.71■□□□□ 0.91
SDR39U1-217ENST00000556249 AKAP11Q9UKA4 1901 aa20.7■□□□□ 0.91
SDR39U1-217ENST00000556249 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
SDR39U1-217ENST00000556249 SULF1Q8IWU6 871 aa20.7■□□□□ 0.9
SDR39U1-217ENST00000556249 SCAF8Q9UPN6 1271 aaKnown RBP20.7■□□□□ 0.9
SDR39U1-217ENST00000556249 HPS5Q9UPZ3 1129 aa20.7■□□□□ 0.9
SDR39U1-217ENST00000556249 RPS12P25398 132 aaKnown RBP20.69■□□□□ 0.9
SDR39U1-217ENST00000556249 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
SDR39U1-217ENST00000556249 TMC4Q7Z404 712 aa20.69■□□□□ 0.9
SDR39U1-217ENST00000556249 RASAL3Q86YV0 1011 aa20.69■□□□□ 0.9
SDR39U1-217ENST00000556249 FAM89AQ96GI7 184 aa20.69■□□□□ 0.9
SDR39U1-217ENST00000556249 LRRC37AA6NMS7 1700 aa20.69■□□□□ 0.9
SDR39U1-217ENST00000556249 MOB2Q70IA6 237 aa20.68■□□□□ 0.9
SDR39U1-217ENST00000556249 MAPK8IP3Q9UPT6 1336 aa20.68■□□□□ 0.9
SDR39U1-217ENST00000556249 ATP5J2-PTCD1G3V325 749 aa20.67■□□□□ 0.9
SDR39U1-217ENST00000556249 ANGEL2Q5VTE6 544 aaKnown RBP20.67■□□□□ 0.9
SDR39U1-217ENST00000556249 TBC1D16Q8TBP0 767 aa20.67■□□□□ 0.9
SDR39U1-217ENST00000556249 TBC1D8O95759 1140 aa20.66■□□□□ 0.9
SDR39U1-217ENST00000556249 SCARF1Q14162 830 aa20.66■□□□□ 0.9
SDR39U1-217ENST00000556249 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
SDR39U1-217ENST00000556249 VIL1P09327 827 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-217ENST00000556249 RIPK4P57078 832 aa20.65■□□□□ 0.9
SDR39U1-217ENST00000556249 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-217ENST00000556249 EYA3Q99504 573 aa20.65■□□□□ 0.9
SDR39U1-217ENST00000556249 HDAC9Q9UKV0 1011 aa20.65■□□□□ 0.9
SDR39U1-217ENST00000556249 SCN9AQ15858 1988 aa20.65■□□□□ 0.9
SDR39U1-217ENST00000556249 ZNF296Q8WUU4 475 aaPredicted RBP20.64■□□□□ 0.89
SDR39U1-217ENST00000556249 CHPF2Q9P2E5 772 aa20.64■□□□□ 0.89
SDR39U1-217ENST00000556249 WDR43Q15061 677 aaKnown RBP eCLIP20.63■□□□□ 0.89
SDR39U1-217ENST00000556249 PRAMEF18Q5VWM3 479 aa20.63■□□□□ 0.89
SDR39U1-217ENST00000556249 ZC3H12CQ9C0D7 883 aaKnown RBP20.63■□□□□ 0.89
SDR39U1-217ENST00000556249 G3V3G9 751 aa20.62■□□□□ 0.89
SDR39U1-217ENST00000556249 UBE2Q2LH0YL09 131 aa20.62■□□□□ 0.89
SDR39U1-217ENST00000556249 RPS8P62241 208 aaKnown RBP20.62■□□□□ 0.89
SDR39U1-217ENST00000556249 DCAF8Q5TAQ9 597 aa20.62■□□□□ 0.89
SDR39U1-217ENST00000556249 ISCA1Q9BUE6 129 aa20.62■□□□□ 0.89
SDR39U1-217ENST00000556249 MKRN3Q13064 507 aaKnown RBP20.61■□□□□ 0.89
SDR39U1-217ENST00000556249 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
SDR39U1-217ENST00000556249 SEC31BQ9NQW1 1179 aa20.61■□□□□ 0.89
SDR39U1-217ENST00000556249 UFL1O94874 794 aa20.6■□□□□ 0.89
SDR39U1-217ENST00000556249 ZNF280AP59817 542 aaPredicted RBP20.6■□□□□ 0.89
SDR39U1-217ENST00000556249 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
SDR39U1-217ENST00000556249 REM2Q8IYK8 340 aaPredicted RBP20.6■□□□□ 0.89
SDR39U1-217ENST00000556249 PLBD2Q8NHP8 589 aa20.6■□□□□ 0.89
SDR39U1-217ENST00000556249 PNNQ9H307 717 aaKnown RBP20.6■□□□□ 0.89
SDR39U1-217ENST00000556249 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
SDR39U1-217ENST00000556249 RSBN1LQ6PCB5 846 aaPredicted RBP20.59■□□□□ 0.89
SDR39U1-217ENST00000556249 ANKIB1Q9P2G1 1089 aa20.59■□□□□ 0.89
SDR39U1-217ENST00000556249 LAS1LQ9Y4W2 734 aaKnown RBP20.59■□□□□ 0.89
SDR39U1-217ENST00000556249 PKN2Q16513 984 aaKnown RBP20.58■□□□□ 0.89
SDR39U1-217ENST00000556249 MYOZ2Q9NPC6 264 aa20.58■□□□□ 0.89
SDR39U1-217ENST00000556249 FKBP1BP68106 108 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 TTLL12Q14166 644 aaPredicted RBP20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 NEUROD2Q15784 382 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 AGBL3Q8NEM8 1001 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 R3HDMLQ9H3Y0 253 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 BABAM1Q9NWV8 329 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 PODXL2Q9NZ53 605 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 GGA1Q9UJY5 639 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 PAPPA2Q9BXP8 1791 aa20.57■□□□□ 0.88
SDR39U1-217ENST00000556249 GPR25O00155 361 aa20.56■□□□□ 0.88
SDR39U1-217ENST00000556249 USP17L8P0C7I0 530 aa20.56■□□□□ 0.88
SDR39U1-217ENST00000556249 TMPOP42166 694 aaKnown RBP20.56■□□□□ 0.88
SDR39U1-217ENST00000556249 HDGFL1Q5TGJ6 251 aa20.56■□□□□ 0.88
SDR39U1-217ENST00000556249 JARID2Q92833 1246 aaPredicted RBP20.56■□□□□ 0.88
SDR39U1-217ENST00000556249 WTIPA6NIX2 430 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-217ENST00000556249 NBPF9Q3BBW0 867 aa20.55■□□□□ 0.88
SDR39U1-217ENST00000556249 GMLQ99445 158 aa20.55■□□□□ 0.88
SDR39U1-217ENST00000556249 MXD3Q9BW11 206 aa20.55■□□□□ 0.88
SDR39U1-217ENST00000556249 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
SDR39U1-217ENST00000556249 FBXO46Q6PJ61 603 aaPredicted RBP20.54■□□□□ 0.88
SDR39U1-217ENST00000556249 CHL1O00533 1208 aa20.53■□□□□ 0.88
SDR39U1-217ENST00000556249 TM4SF4P48230 202 aa20.53■□□□□ 0.88
SDR39U1-217ENST00000556249 PRKG1Q13976 671 aa20.53■□□□□ 0.88
SDR39U1-217ENST00000556249 CCDC146Q8IYE0 955 aa20.52■□□□□ 0.88
SDR39U1-217ENST00000556249 DBF4Q9UBU7 674 aaPredicted RBP20.52■□□□□ 0.88
SDR39U1-217ENST00000556249 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
SDR39U1-217ENST00000556249 USP17L3A6NCW0 530 aa20.51■□□□□ 0.87
SDR39U1-217ENST00000556249 USP17L4A6NCW7 530 aa20.51■□□□□ 0.87
SDR39U1-217ENST00000556249 LMOD3Q0VAK6 560 aa20.51■□□□□ 0.87
SDR39U1-217ENST00000556249 USP17L1Q7RTZ2 530 aa20.51■□□□□ 0.87
SDR39U1-217ENST00000556249 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.51■□□□□ 0.87
SDR39U1-217ENST00000556249 FKTNO75072 461 aa20.5■□□□□ 0.87
SDR39U1-217ENST00000556249 ZBTB38Q8NAP3 1195 aaPredicted RBP20.5■□□□□ 0.87
SDR39U1-217ENST00000556249 PTPN12Q05209 780 aaKnown RBP20.49■□□□□ 0.87
SDR39U1-217ENST00000556249 TRIM28Q13263 835 aaKnown RBP20.49■□□□□ 0.87
SDR39U1-217ENST00000556249 RIC3Q7Z5B4 369 aa20.49■□□□□ 0.87
SDR39U1-217ENST00000556249 FBXW7Q969H0 707 aa20.49■□□□□ 0.87
SDR39U1-217ENST00000556249 FZD1Q9UP38 647 aa20.49■□□□□ 0.87
SDR39U1-217ENST00000556249 ZNF609O15014 1411 aa20.49■□□□□ 0.87
SDR39U1-217ENST00000556249 POTEFA5A3E0 1075 aa20.48■□□□□ 0.87
SDR39U1-217ENST00000556249 SASH1O94885 1247 aa20.48■□□□□ 0.87
SDR39U1-217ENST00000556249 HABP4Q5JVS0 413 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-217ENST00000556249 MYD88Q99836 296 aa20.48■□□□□ 0.87
SDR39U1-217ENST00000556249 PHAXQ9H814 394 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-217ENST00000556249 HYPKQ9NX55 129 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms