RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 NUP98P52948 1817 aa6.59□□□□□ -1.35
LINC00871-201ENST00000555246 CACNA1SQ13698 1873 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 CDHR2Q9BYE9 1310 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 RASSF10A6NK89 507 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 SEC24BO95487 1268 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 HSPA1AP0DMV8 641 aaKnown RBP6.58□□□□□ -1.36
LINC00871-201ENST00000555246 HSPA1BP0DMV9 641 aaKnown RBP6.58□□□□□ -1.36
LINC00871-201ENST00000555246 PLCG2P16885 1265 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 CNGB1Q14028 1251 aaPredicted RBP6.58□□□□□ -1.36
LINC00871-201ENST00000555246 OLFM4Q6UX06 510 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 THUMPD2Q9BTF0 503 aaKnown RBP6.58□□□□□ -1.36
LINC00871-201ENST00000555246 RTFDC1Q9BY42 306 aaPredicted RBP6.58□□□□□ -1.36
LINC00871-201ENST00000555246 ZNF277Q9NRM2 450 aaPredicted RBP6.58□□□□□ -1.36
LINC00871-201ENST00000555246 TSPYL4Q9UJ04 414 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 LRRC37AA6NMS7 1700 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 LTBP1Q14766 1721 aa6.58□□□□□ -1.36
LINC00871-201ENST00000555246 ANKRD36CQ5JPF3 1778 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 CHL1O00533 1208 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 TBC1D12O60347 775 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 EVI5O60447 810 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 GTF2E1P29083 439 aaPredicted RBP6.57□□□□□ -1.36
LINC00871-201ENST00000555246 EPHX2P34913 555 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 TMPOP42166 694 aaKnown RBP6.57□□□□□ -1.36
LINC00871-201ENST00000555246 SCNN1DP51172 638 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 SUSD4Q5VX71 490 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 POTEGQ6S5H5 508 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 PPP1R42Q7Z4L9 355 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 NUTM1Q86Y26 1132 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 SYNE4Q8N205 404 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 JDP2Q8WYK2 163 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 RPGRQ92834 1020 aaKnown RBP6.57□□□□□ -1.36
LINC00871-201ENST00000555246 ATP6V0A2Q9Y487 856 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 DUOX1Q9NRD9 1551 aa6.57□□□□□ -1.36
LINC00871-201ENST00000555246 MYBBP1AQ9BQG0 1328 aaKnown RBP6.56□□□□□ -1.36
LINC00871-201ENST00000555246 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 PPEF1O14829 653 aaPredicted RBP6.56□□□□□ -1.36
LINC00871-201ENST00000555246 GPTP24298 496 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 RIPK4P57078 832 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 PTGDRQ13258 359 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 PROSER3Q2NL68 480 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 HSP90AB3PQ58FF7 597 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 C3orf67Q6ZVT6 689 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 USP50Q70EL3 339 aaPredicted RBP6.56□□□□□ -1.36
LINC00871-201ENST00000555246 TMC4Q7Z404 712 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 RBM17Q96I25 401 aaKnown RBP6.56□□□□□ -1.36
LINC00871-201ENST00000555246 ZBTB3Q9H5J0 574 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 PRDM10Q9NQV6 1147 aa6.56□□□□□ -1.36
LINC00871-201ENST00000555246 DDX21Q9NR30 783 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC00871-201ENST00000555246 RRP7AQ9Y3A4 280 aaKnown RBP6.56□□□□□ -1.36
LINC00871-201ENST00000555246 ABCC4O15439 1325 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 BBOX1O75936 387 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 MYL6BP14649 208 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 KIAA2012Q0VF49 1180 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 NLRP10Q86W26 655 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 TNS4Q8IZW8 715 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 CNTROBQ8N137 903 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 SUPT20HQ8NEM7 779 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 NLRP3Q96P20 1036 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 UTP14AQ9BVJ6 771 aaKnown RBP6.55□□□□□ -1.36
LINC00871-201ENST00000555246 ZNF609O15014 1411 aa6.55□□□□□ -1.36
LINC00871-201ENST00000555246 LAMB2P55268 1798 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 SH3TC1Q8TE82 1336 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 FAM177BA6PVY3 158 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 VEGFBP49765 207 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 EIF6P56537 245 aaKnown RBP6.54□□□□□ -1.36
LINC00871-201ENST00000555246 TRIM28Q13263 835 aaKnown RBP6.54□□□□□ -1.36
LINC00871-201ENST00000555246 TCIRG1Q13488 830 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 TTLL12Q14166 644 aaPredicted RBP6.54□□□□□ -1.36
LINC00871-201ENST00000555246 SP8Q8IXZ3 490 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 NIM1KQ8IY84 436 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 LARGE2Q8N3Y3 721 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 PTCD2Q8WV60 388 aaKnown RBP6.54□□□□□ -1.36
LINC00871-201ENST00000555246 RUNDC1Q96C34 613 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 HHIPL1Q96JK4 782 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 WBP1LQ9NX94 342 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 GPRC5DQ9NZD1 345 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 PGAP2Q9UHJ9 254 aa6.54□□□□□ -1.36
LINC00871-201ENST00000555246 DDX60Q8IY21 1712 aaKnown RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 FOXN1O15353 648 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 PPIP5K2O43314 1243 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 ZNF853P0CG23 659 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 MS4A1P11836 297 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 CTCFP49711 727 aaPredicted RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 CXCL9Q07325 125 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 GRAPQ13588 217 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 SF3B3Q15393 1217 aaKnown RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 EAPPQ56P03 285 aaPredicted RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 MAP1SQ66K74 1059 aaPredicted RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 COPS6Q7L5N1 327 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 NGEFQ8N5V2 710 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 PLBD2Q8NHP8 589 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 GRAPLQ8TC17 118 aaPredicted RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 ISCA1Q9BUE6 129 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 REPIN1Q9BWE0 567 aaKnown RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 GOPCQ9HD26 462 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 ADARB2Q9NS39 739 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms