RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 OAS3Q9Y6K5 1087 aaKnown RBP10.62□□□□□ -0.71
VRK1-203ENST00000555067 LOC102724428A0A0B4J2F2 783 aa10.61□□□□□ -0.71
VRK1-203ENST00000555067 IGLV1-40P01703 118 aa10.61□□□□□ -0.71
VRK1-203ENST00000555067 SIK1P57059 783 aa10.61□□□□□ -0.71
VRK1-203ENST00000555067 C11orf91Q3C1V1 193 aa10.61□□□□□ -0.71
VRK1-203ENST00000555067 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
VRK1-203ENST00000555067 J3QW42 95 aa10.6□□□□□ -0.71
VRK1-203ENST00000555067 ELOAQ14241 798 aaKnown RBP10.6□□□□□ -0.71
VRK1-203ENST00000555067 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
VRK1-203ENST00000555067 IL22RA1Q8N6P7 574 aa10.6□□□□□ -0.71
VRK1-203ENST00000555067 DCAF11Q8TEB1 546 aa10.6□□□□□ -0.71
VRK1-203ENST00000555067 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
VRK1-203ENST00000555067 COBLO75128 1261 aa10.59□□□□□ -0.71
VRK1-203ENST00000555067 TGFB1P01137 390 aa10.59□□□□□ -0.71
VRK1-203ENST00000555067 YBX3P16989 372 aaKnown RBP eCLIP10.59□□□□□ -0.71
VRK1-203ENST00000555067 TAL1P17542 331 aaPredicted RBP10.59□□□□□ -0.71
VRK1-203ENST00000555067 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.59□□□□□ -0.71
VRK1-203ENST00000555067 AGGF1Q8N302 714 aaeCLIP10.59□□□□□ -0.71
VRK1-203ENST00000555067 UBL7Q96S82 380 aaPredicted RBP10.59□□□□□ -0.71
VRK1-203ENST00000555067 PTCD1O75127 700 aaKnown RBP10.58□□□□□ -0.72
VRK1-203ENST00000555067 SOX18P35713 384 aa10.58□□□□□ -0.72
VRK1-203ENST00000555067 GP2P55259 537 aaKnown RBP10.58□□□□□ -0.72
VRK1-203ENST00000555067 GDF6Q6KF10 455 aaPredicted RBP10.58□□□□□ -0.72
VRK1-203ENST00000555067 USP20Q9Y2K6 914 aa10.58□□□□□ -0.72
VRK1-203ENST00000555067 GLB1P16278 677 aa10.57□□□□□ -0.72
VRK1-203ENST00000555067 MMP20O60882 483 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 XYLBO75191 536 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 GHRHP01286 108 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 PSAPP07602 524 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 ZDHHC13Q8IUH4 622 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 ARMC10Q8N2F6 343 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 LRFN2Q9ULH4 789 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 ZMIZ1Q9ULJ6 1067 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 KCNMB2Q9Y691 235 aa10.56□□□□□ -0.72
VRK1-203ENST00000555067 SPINK2P20155 84 aa10.55□□□□□ -0.72
VRK1-203ENST00000555067 CACTIN-AS1Q8N1I8 211 aa10.55□□□□□ -0.72
VRK1-203ENST00000555067 ZMYND15Q9H091 742 aa10.55□□□□□ -0.72
VRK1-203ENST00000555067 STOML1Q9UBI4 398 aa10.55□□□□□ -0.72
VRK1-203ENST00000555067 ARID1BQ8NFD5 2236 aaPredicted RBP10.54□□□□□ -0.72
VRK1-203ENST00000555067 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
VRK1-203ENST00000555067 FKBP5Q13451 457 aaPredicted RBP10.54□□□□□ -0.72
VRK1-203ENST00000555067 NSUN5Q96P11 429 aaKnown RBP10.54□□□□□ -0.72
VRK1-203ENST00000555067 MUC3BQ9H195 1237 aa10.54□□□□□ -0.72
VRK1-203ENST00000555067 TRIM33Q9UPN9 1127 aa10.54□□□□□ -0.72
VRK1-203ENST00000555067 TM4SF5O14894 197 aa10.53□□□□□ -0.72
VRK1-203ENST00000555067 GALNT11Q8NCW6 608 aa10.53□□□□□ -0.72
VRK1-203ENST00000555067 DHX15O43143 795 aaKnown RBP10.52□□□□□ -0.73
VRK1-203ENST00000555067 ATG7O95352 703 aa10.52□□□□□ -0.73
VRK1-203ENST00000555067 SRPK2P78362 688 aaKnown RBP10.52□□□□□ -0.73
VRK1-203ENST00000555067 CMTR1Q8N1G2 835 aaKnown RBP10.52□□□□□ -0.73
VRK1-203ENST00000555067 RBSNQ9H1K0 784 aa10.52□□□□□ -0.73
VRK1-203ENST00000555067 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.51□□□□□ -0.73
VRK1-203ENST00000555067 PRMT3O60678 531 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 WISP1O95388 367 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 OCLNQ16625 522 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 INTS5Q6P9B9 1019 aaKnown RBP10.51□□□□□ -0.73
VRK1-203ENST00000555067 TREML1Q86YW5 311 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 RGL4Q8IZJ4 473 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 STK32AQ8WU08 396 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 PRIMPOLQ96LW4 560 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 PPME1Q9Y570 386 aa10.51□□□□□ -0.73
VRK1-203ENST00000555067 FAM69CQ0P6D2 419 aa10.5□□□□□ -0.73
VRK1-203ENST00000555067 NFIAQ12857 509 aa10.5□□□□□ -0.73
VRK1-203ENST00000555067 UVSSAQ2YD98 709 aa10.5□□□□□ -0.73
VRK1-203ENST00000555067 COL26A1Q96A83 441 aa10.5□□□□□ -0.73
VRK1-203ENST00000555067 RNF114Q9Y508 228 aa10.5□□□□□ -0.73
VRK1-203ENST00000555067 COX20Q5RI15 118 aa10.49□□□□□ -0.73
VRK1-203ENST00000555067 LCE1DQ5T752 114 aa10.49□□□□□ -0.73
VRK1-203ENST00000555067 DTX1Q86Y01 620 aa10.49□□□□□ -0.73
VRK1-203ENST00000555067 CCDC97Q96F63 343 aaPredicted RBP10.49□□□□□ -0.73
VRK1-203ENST00000555067 FAM46AQ96IP4 442 aaKnown RBP10.49□□□□□ -0.73
VRK1-203ENST00000555067 CEP41Q9BYV8 373 aa10.49□□□□□ -0.73
VRK1-203ENST00000555067 PRR19A6NJB7 356 aa10.48□□□□□ -0.73
VRK1-203ENST00000555067 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
VRK1-203ENST00000555067 KRTAP4-7Q9BYR0 210 aa10.48□□□□□ -0.73
VRK1-203ENST00000555067 C7orf69Q9H7B7 122 aa10.48□□□□□ -0.73
VRK1-203ENST00000555067 CD68P34810 354 aaPredicted RBP10.47□□□□□ -0.73
VRK1-203ENST00000555067 RNF43Q68DV7 783 aa10.47□□□□□ -0.73
VRK1-203ENST00000555067 C16orf46Q6P387 395 aa10.47□□□□□ -0.73
VRK1-203ENST00000555067 KCNK4Q9NYG8 393 aa10.47□□□□□ -0.73
VRK1-203ENST00000555067 CXXC1Q9P0U4 656 aaPredicted RBP10.47□□□□□ -0.73
VRK1-203ENST00000555067 SERPINA10Q9UK55 444 aa10.47□□□□□ -0.73
VRK1-203ENST00000555067 LINC01387J3KSC0 135 aa10.46□□□□□ -0.73
VRK1-203ENST00000555067 GRIK1P39086 918 aa10.46□□□□□ -0.73
VRK1-203ENST00000555067 NLRP13Q86W25 1043 aa10.46□□□□□ -0.73
VRK1-203ENST00000555067 DBNDD2Q9BQY9 259 aa10.46□□□□□ -0.73
VRK1-203ENST00000555067 BRD2P25440 801 aaKnown RBP10.45□□□□□ -0.74
VRK1-203ENST00000555067 TRIP4Q15650 581 aaPredicted RBP10.45□□□□□ -0.74
VRK1-203ENST00000555067 TMEM164Q5U3C3 297 aa10.45□□□□□ -0.74
VRK1-203ENST00000555067 ACAD11Q709F0 780 aa10.45□□□□□ -0.74
VRK1-203ENST00000555067 TRIM42Q8IWZ5 723 aa10.45□□□□□ -0.74
VRK1-203ENST00000555067 KIAA1211Q6ZU35 1233 aa10.44□□□□□ -0.74
VRK1-203ENST00000555067 OR13H1Q8NG92 308 aa10.44□□□□□ -0.74
VRK1-203ENST00000555067 CLP1Q92989 425 aaKnown RBP10.44□□□□□ -0.74
VRK1-203ENST00000555067 UTP4Q969X6 686 aaKnown RBP10.44□□□□□ -0.74
VRK1-203ENST00000555067 MYRFLQ96LU7 910 aa10.44□□□□□ -0.74
VRK1-203ENST00000555067 HMX2A2RU54 273 aa10.43□□□□□ -0.74
VRK1-203ENST00000555067 COL13A1Q5TAT6 717 aaPredicted RBP10.43□□□□□ -0.74
VRK1-203ENST00000555067 ADAMTSL4Q6UY14 1074 aa10.43□□□□□ -0.74
VRK1-203ENST00000555067 FZD5Q13467 585 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms