RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 MYH3P11055 1940 aa26.23■■□□□ 1.79
HIF1A-206ENST00000553999 WTIPA6NIX2 430 aaPredicted RBP26.22■■□□□ 1.79
HIF1A-206ENST00000553999 ECE2O60344 883 aa26.22■■□□□ 1.79
HIF1A-206ENST00000553999 EYA3Q99504 573 aa26.22■■□□□ 1.79
HIF1A-206ENST00000553999 KCNQ5Q9NR82 932 aa26.22■■□□□ 1.79
HIF1A-206ENST00000553999 CEP350Q5VT06 3117 aa26.22■■□□□ 1.79
HIF1A-206ENST00000553999 CACNA1FO60840 1977 aa26.22■■□□□ 1.79
HIF1A-206ENST00000553999 G3V3G9 751 aa26.21■■□□□ 1.79
HIF1A-206ENST00000553999 DCAF8Q5TAQ9 597 aa26.21■■□□□ 1.79
HIF1A-206ENST00000553999 MRPL50Q8N5N7 158 aaKnown RBP26.21■■□□□ 1.79
HIF1A-206ENST00000553999 ZBTB12Q9Y330 459 aaPredicted RBP26.21■■□□□ 1.79
HIF1A-206ENST00000553999 ITGA6P23229 1130 aa26.2■■□□□ 1.78
HIF1A-206ENST00000553999 PNMA8AQ86V59 439 aaPredicted RBP26.2■■□□□ 1.78
HIF1A-206ENST00000553999 DNAJC5GQ8N7S2 189 aa26.2■■□□□ 1.78
HIF1A-206ENST00000553999 SSH1Q8WYL5 1049 aa26.2■■□□□ 1.78
HIF1A-206ENST00000553999 PSMD14O00487 310 aa26.19■■□□□ 1.78
HIF1A-206ENST00000553999 ZC3H12CQ9C0D7 883 aaKnown RBP26.19■■□□□ 1.78
HIF1A-206ENST00000553999 GPRC5DQ9NZD1 345 aa26.19■■□□□ 1.78
HIF1A-206ENST00000553999 XDHP47989 1333 aa26.18■■□□□ 1.78
HIF1A-206ENST00000553999 IGHMBP2P38935 993 aaKnown RBP26.18■■□□□ 1.78
HIF1A-206ENST00000553999 TNIP1Q15025 636 aa26.18■■□□□ 1.78
HIF1A-206ENST00000553999 C9orf78Q9NZ63 289 aaPredicted RBP26.18■■□□□ 1.78
HIF1A-206ENST00000553999 ADAMTSL1Q8N6G6 1762 aa26.18■■□□□ 1.78
HIF1A-206ENST00000553999 FMR1Q06787 632 aaKnown RBP eCLIP26.17■■□□□ 1.787e-7■■■□□ 14.8
HIF1A-206ENST00000553999 EPHA10Q5JZY3 1008 aa26.17■■□□□ 1.78
HIF1A-206ENST00000553999 PLA2G12BQ9BX93 195 aa26.17■■□□□ 1.78
HIF1A-206ENST00000553999 SRCIN1Q9C0H9 1055 aa26.17■■□□□ 1.78
HIF1A-206ENST00000553999 PODXL2Q9NZ53 605 aa26.17■■□□□ 1.78
HIF1A-206ENST00000553999 MINPP1Q9UNW1 487 aa26.17■■□□□ 1.78
HIF1A-206ENST00000553999 CNTROBQ8N137 903 aa26.16■■□□□ 1.78
HIF1A-206ENST00000553999 KLRG1Q96E93 195 aa26.16■■□□□ 1.78
HIF1A-206ENST00000553999 SMC4Q9NTJ3 1288 aa26.16■■□□□ 1.78
HIF1A-206ENST00000553999 RTL9Q8NET4 1388 aa26.16■■□□□ 1.78
HIF1A-206ENST00000553999 GRM8O00222 908 aa26.15■■□□□ 1.78
HIF1A-206ENST00000553999 FOXO4P98177 505 aa26.15■■□□□ 1.78
HIF1A-206ENST00000553999 BSDC1Q9NW68 430 aaPredicted RBP26.15■■□□□ 1.78
HIF1A-206ENST00000553999 LMBR1LQ6UX01 489 aa26.14■■□□□ 1.78
HIF1A-206ENST00000553999 MICALL2Q8IY33 904 aa26.14■■□□□ 1.78
HIF1A-206ENST00000553999 TRPM4Q8TD43 1214 aa26.14■■□□□ 1.78
HIF1A-206ENST00000553999 MPHOSPH8Q99549 860 aa26.14■■□□□ 1.78
HIF1A-206ENST00000553999 ADARB2Q9NS39 739 aaKnown RBP26.14■■□□□ 1.78
HIF1A-206ENST00000553999 MKRN1Q9UHC7 482 aaKnown RBP26.14■■□□□ 1.78
HIF1A-206ENST00000553999 ANKRD18BA2A2Z9 1011 aa26.13■■□□□ 1.77
HIF1A-206ENST00000553999 ITGBL1O95965 494 aaPredicted RBP26.13■■□□□ 1.77
HIF1A-206ENST00000553999 ATP2B4P23634 1241 aa26.13■■□□□ 1.77
HIF1A-206ENST00000553999 FBXW7Q969H0 707 aa26.13■■□□□ 1.77
HIF1A-206ENST00000553999 ZNF594Q96JF6 807 aaPredicted RBP26.13■■□□□ 1.77
HIF1A-206ENST00000553999 CNOT7Q9UIV1 285 aaKnown RBP26.13■■□□□ 1.77
HIF1A-206ENST00000553999 PASKQ96RG2 1323 aa26.13■■□□□ 1.77
HIF1A-206ENST00000553999 CSF1RP07333 972 aa26.12■■□□□ 1.77
HIF1A-206ENST00000553999 RBM26Q5T8P6 1007 aaKnown RBP26.12■■□□□ 1.77
HIF1A-206ENST00000553999 HELBQ8NG08 1087 aaPredicted RBP26.12■■□□□ 1.77
HIF1A-206ENST00000553999 SUCLG2Q96I99 432 aa26.12■■□□□ 1.77
HIF1A-206ENST00000553999 TRAF5O00463 557 aa26.11■■□□□ 1.77
HIF1A-206ENST00000553999 ALDH1L1O75891 902 aa26.11■■□□□ 1.77
HIF1A-206ENST00000553999 KLRK1P26718 216 aa26.11■■□□□ 1.77
HIF1A-206ENST00000553999 CCT4P50991 539 aaKnown RBP26.11■■□□□ 1.77
HIF1A-206ENST00000553999 USP50Q70EL3 339 aaPredicted RBP26.11■■□□□ 1.77
HIF1A-206ENST00000553999 SCN9AQ15858 1988 aa26.1■■□□□ 1.77
HIF1A-206ENST00000553999 SNAP23O00161 211 aa26.1■■□□□ 1.77
HIF1A-206ENST00000553999 NBPF7P0C2Y1 421 aaPredicted RBP26.1■■□□□ 1.77
HIF1A-206ENST00000553999 IFIT5Q13325 482 aaKnown RBP26.1■■□□□ 1.77
HIF1A-206ENST00000553999 TBC1D10BQ4KMP7 808 aaPredicted RBP26.1■■□□□ 1.77
HIF1A-206ENST00000553999 TAF7LQ5H9L4 462 aa26.1■■□□□ 1.77
HIF1A-206ENST00000553999 SAMD7Q7Z3H4 446 aa26.1■■□□□ 1.77
HIF1A-206ENST00000553999 TAF5LO75529 589 aa26.09■■□□□ 1.77
HIF1A-206ENST00000553999 KCNJ4P48050 445 aa26.09■■□□□ 1.77
HIF1A-206ENST00000553999 CREBZFQ9NS37 354 aa26.09■■□□□ 1.77
HIF1A-206ENST00000553999 H7C1D1 291 aa26.08■■□□□ 1.77
HIF1A-206ENST00000553999 PLIN1O60240 522 aa26.08■■□□□ 1.77
HIF1A-206ENST00000553999 EGFRP00533 1210 aa26.08■■□□□ 1.77
HIF1A-206ENST00000553999 HIRAP54198 1017 aaPredicted RBP26.08■■□□□ 1.77
HIF1A-206ENST00000553999 CHRNDQ07001 517 aa26.08■■□□□ 1.77
HIF1A-206ENST00000553999 TXNRD3Q86VQ6 643 aa26.08■■□□□ 1.77
HIF1A-206ENST00000553999 PTPRCP08575 1304 aa26.08■■□□□ 1.77
HIF1A-206ENST00000553999 HNRNPUQ00839 825 aaKnown RBP eCLIP26.07■■□□□ 1.767e-6■□□□□ 10.8
HIF1A-206ENST00000553999 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
HIF1A-206ENST00000553999 GLIS2Q9BZE0 524 aaPredicted RBP26.07■■□□□ 1.76
HIF1A-206ENST00000553999 TMEM88BA6NKF7 163 aa26.06■■□□□ 1.76
HIF1A-206ENST00000553999 CCDC57Q2TAC2 916 aa26.06■■□□□ 1.76
HIF1A-206ENST00000553999 MXD3Q9BW11 206 aa26.06■■□□□ 1.76
HIF1A-206ENST00000553999 ZNF804BA4D1E1 1349 aa26.06■■□□□ 1.76
HIF1A-206ENST00000553999 MED23Q9ULK4 1368 aa26.06■■□□□ 1.76
HIF1A-206ENST00000553999 DLK2Q6UY11 383 aa26.05■■□□□ 1.76
HIF1A-206ENST00000553999 ZNF408Q9H9D4 720 aa26.05■■□□□ 1.76
HIF1A-206ENST00000553999 ABT1Q9ULW3 272 aaKnown RBP26.05■■□□□ 1.76
HIF1A-206ENST00000553999 ALDH1L2Q3SY69 923 aa26.04■■□□□ 1.76
HIF1A-206ENST00000553999 KAZALD1Q96I82 304 aa26.04■■□□□ 1.76
HIF1A-206ENST00000553999 ANKRD2Q9GZV1 360 aa26.04■■□□□ 1.76
HIF1A-206ENST00000553999 BICC1Q9H694 974 aaKnown RBP26.04■■□□□ 1.76
HIF1A-206ENST00000553999 NOB1Q9ULX3 412 aaKnown RBP26.04■■□□□ 1.76
HIF1A-206ENST00000553999 CNNM1Q9NRU3 951 aa26.03■■□□□ 1.76
HIF1A-206ENST00000553999 VIL1P09327 827 aaKnown RBP26.02■■□□□ 1.76
HIF1A-206ENST00000553999 LEMD3Q9Y2U8 911 aa26.02■■□□□ 1.76
HIF1A-206ENST00000553999 USP17L3A6NCW0 530 aa26.01■■□□□ 1.75
HIF1A-206ENST00000553999 USP17L4A6NCW7 530 aa26.01■■□□□ 1.75
HIF1A-206ENST00000553999 ASTN2O75129 1339 aaPredicted RBP26.01■■□□□ 1.75
HIF1A-206ENST00000553999 GRM1Q13255 1194 aa26.01■■□□□ 1.75
HIF1A-206ENST00000553999 RSBN1LQ6PCB5 846 aaPredicted RBP26.01■■□□□ 1.75
HIF1A-206ENST00000553999 LDHAL6AQ6ZMR3 332 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms