RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
HNRNPC-206ENST00000553444 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
HNRNPC-206ENST00000553444 ISCA1Q9BUE6 129 aa15.33■□□□□ 0.04
HNRNPC-206ENST00000553444 PLBD2Q8NHP8 589 aa15.32■□□□□ 0.04
HNRNPC-206ENST00000553444 HPS5Q9UPZ3 1129 aa15.32■□□□□ 0.04
HNRNPC-206ENST00000553444 ZNF280AP59817 542 aaPredicted RBP15.31■□□□□ 0.04
HNRNPC-206ENST00000553444 KRT24Q2M2I5 525 aa15.31■□□□□ 0.04
HNRNPC-206ENST00000553444 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
HNRNPC-206ENST00000553444 LRRC37AA6NMS7 1700 aa15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 ATP5J2-PTCD1G3V325 749 aa15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 ZNF609O15014 1411 aa15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 FKBP1BP68106 108 aa15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 LMOD3Q0VAK6 560 aa15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 ANGEL2Q5VTE6 544 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 ZC3H12CQ9C0D7 883 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 PODXL2Q9NZ53 605 aa15.3■□□□□ 0.04
HNRNPC-206ENST00000553444 IRS4O14654 1257 aaPredicted RBP15.29■□□□□ 0.04
HNRNPC-206ENST00000553444 TMPOP42166 694 aaKnown RBP15.29■□□□□ 0.04
HNRNPC-206ENST00000553444 SCARF1Q14162 830 aa15.29■□□□□ 0.04
HNRNPC-206ENST00000553444 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
HNRNPC-206ENST00000553444 COL4A1P02462 1669 aa15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 CHL1O00533 1208 aa15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 UFL1O94874 794 aa15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 TRIM28Q13263 835 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 PKN2Q16513 984 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 RTL5Q5HYW3 569 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 AGBL3Q8NEM8 1001 aa15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 ANKRD36CQ5JPF3 1778 aa15.28■□□□□ 0.04
HNRNPC-206ENST00000553444 ZNF296Q8WUU4 475 aaPredicted RBP15.27■□□□□ 0.04
HNRNPC-206ENST00000553444 GMLQ99445 158 aa15.27■□□□□ 0.04
HNRNPC-206ENST00000553444 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
HNRNPC-206ENST00000553444 PITPNM2Q9BZ72 1349 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 G3V3G9 751 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 HOXB7P09629 217 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 MOB2Q70IA6 237 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 MYOZ2Q9NPC6 264 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 SEC31BQ9NQW1 1179 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 LAMB2P55268 1798 aa15.26■□□□□ 0.03
HNRNPC-206ENST00000553444 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
HNRNPC-206ENST00000553444 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
HNRNPC-206ENST00000553444 USP17L8P0C7I0 530 aa15.25■□□□□ 0.03
HNRNPC-206ENST00000553444 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
HNRNPC-206ENST00000553444 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
HNRNPC-206ENST00000553444 DBF4Q9UBU7 674 aaPredicted RBP15.25■□□□□ 0.03
HNRNPC-206ENST00000553444 HDAC9Q9UKV0 1011 aa15.25■□□□□ 0.03
HNRNPC-206ENST00000553444 UBE2Q2LH0YL09 131 aa15.24■□□□□ 0.03
HNRNPC-206ENST00000553444 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
HNRNPC-206ENST00000553444 SCAF8Q9UPN6 1271 aaKnown RBP15.24■□□□□ 0.03
HNRNPC-206ENST00000553444 GPR25O00155 361 aa15.23■□□□□ 0.03
HNRNPC-206ENST00000553444 HYPKQ9NX55 129 aa15.23■□□□□ 0.03
HNRNPC-206ENST00000553444 PAPPA2Q9BXP8 1791 aa15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 USP17L3A6NCW0 530 aa15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 USP17L4A6NCW7 530 aa15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 TM4SF4P48230 202 aa15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 PRAMEF18Q5VWM3 479 aa15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 FBXO46Q6PJ61 603 aaPredicted RBP15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 USP17L1Q7RTZ2 530 aa15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 LAS1LQ9Y4W2 734 aaKnown RBP15.22■□□□□ 0.03
HNRNPC-206ENST00000553444 XDHP47989 1333 aa15.21■□□□□ 0.03
HNRNPC-206ENST00000553444 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
HNRNPC-206ENST00000553444 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
HNRNPC-206ENST00000553444 PODNQ7Z5L7 613 aa15.21■□□□□ 0.03
HNRNPC-206ENST00000553444 TAF1P21675 1872 aa15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 DDX60Q8IY21 1712 aaKnown RBP15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 ATP2B4P23634 1241 aa15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 NBPF9Q3BBW0 867 aa15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 CFHR5Q9BXR6 569 aa15.2■□□□□ 0.02
HNRNPC-206ENST00000553444 SCN9AQ15858 1988 aa15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 PDE8AO60658 829 aa15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 PCCAP05165 728 aaPredicted RBP15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 TTLL12Q14166 644 aaPredicted RBP15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 RIC3Q7Z5B4 369 aa15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 ANKRD18AQ8IVF6 992 aa15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
HNRNPC-206ENST00000553444 WNT10BO00744 389 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 FKTNO75072 461 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 NF2P35240 595 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 SREBF2Q12772 1141 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 DACT2Q5SW24 774 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 GCC1Q96CN9 775 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 MYD88Q99836 296 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 MXD3Q9BW11 206 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 R3HDMLQ9H3Y0 253 aa15.18■□□□□ 0.02
HNRNPC-206ENST00000553444 WTIPA6NIX2 430 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-206ENST00000553444 PTPN12Q05209 780 aaKnown RBP15.17■□□□□ 0.02
HNRNPC-206ENST00000553444 JARID2Q92833 1246 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-206ENST00000553444 PHAXQ9H814 394 aaKnown RBP15.17■□□□□ 0.02
HNRNPC-206ENST00000553444 MED23Q9ULK4 1368 aa15.16■□□□□ 0.02
HNRNPC-206ENST00000553444 RALBP1Q15311 655 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms