RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 CTNNA3Q9UI47 895 aa12.17□□□□□ -0.46
CNOT2-243ENST00000553078 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
CNOT2-243ENST00000553078 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
CNOT2-243ENST00000553078 MROH5Q6ZUA9 1318 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 CSF1RP07333 972 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 UQCRFS1P1P0C7P4 283 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 ITGA6P23229 1130 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 SIK1P57059 783 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
CNOT2-243ENST00000553078 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 UTP14AQ9BVJ6 771 aaKnown RBP12.16□□□□□ -0.46
CNOT2-243ENST00000553078 TBC1D2BQ9UPU7 963 aa12.16□□□□□ -0.46
CNOT2-243ENST00000553078 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
CNOT2-243ENST00000553078 SLC5A1P13866 664 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 IGHMBP2P38935 993 aaKnown RBP12.15□□□□□ -0.46
CNOT2-243ENST00000553078 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
CNOT2-243ENST00000553078 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 NEK1Q96PY6 1258 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 MPHOSPH8Q99549 860 aa12.15□□□□□ -0.46
CNOT2-243ENST00000553078 TAF5LO75529 589 aa12.14□□□□□ -0.47
CNOT2-243ENST00000553078 TIMM10P62072 90 aa12.14□□□□□ -0.47
CNOT2-243ENST00000553078 FKBP4Q02790 459 aaKnown RBP eCLIP12.14□□□□□ -0.47
CNOT2-243ENST00000553078 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
CNOT2-243ENST00000553078 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
CNOT2-243ENST00000553078 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
CNOT2-243ENST00000553078 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
CNOT2-243ENST00000553078 STX6O43752 255 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 PUM3Q15397 648 aaKnown RBP12.13□□□□□ -0.47
CNOT2-243ENST00000553078 VPS72Q15906 364 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 HLFQ16534 295 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 FOXD4L5Q5VV16 416 aaPredicted RBP12.13□□□□□ -0.47
CNOT2-243ENST00000553078 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 ZNF589Q86UQ0 364 aaPredicted RBP12.13□□□□□ -0.47
CNOT2-243ENST00000553078 FOXD4L4Q8WXT5 416 aaPredicted RBP12.13□□□□□ -0.47
CNOT2-243ENST00000553078 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
CNOT2-243ENST00000553078 NGLY1Q96IV0 654 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
CNOT2-243ENST00000553078 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
CNOT2-243ENST00000553078 RREB1Q92766 1687 aa12.13□□□□□ -0.47
CNOT2-243ENST00000553078 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 RIC1Q4ADV7 1423 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 LRP5O75197 1615 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 MYH3P11055 1940 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 RGL2O15211 777 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 PRPF40AO75400 957 aaKnown RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 GJB2P29033 226 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 ZNF34Q8IZ26 560 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 MARCH10Q8NA82 808 aaPredicted RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 TTLL11Q8NHH1 800 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 LPIN2Q92539 896 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 APPBP2Q92624 585 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 CDC5LQ99459 802 aaKnown RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
CNOT2-243ENST00000553078 GREM2Q9H772 168 aa12.12□□□□□ -0.47
CNOT2-243ENST00000553078 FSD2A1L4K1 749 aa12.11□□□□□ -0.47
CNOT2-243ENST00000553078 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
CNOT2-243ENST00000553078 PKP1Q13835 747 aa12.11□□□□□ -0.47
CNOT2-243ENST00000553078 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
CNOT2-243ENST00000553078 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
CNOT2-243ENST00000553078 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
CNOT2-243ENST00000553078 GRPEL1Q9HAV7 217 aa12.11□□□□□ -0.47
CNOT2-243ENST00000553078 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
CNOT2-243ENST00000553078 MAST3O60307 1309 aa12.11□□□□□ -0.47
CNOT2-243ENST00000553078 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 F13A1P00488 732 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 GTF2E1P29083 439 aaPredicted RBP12.1□□□□□ -0.47
CNOT2-243ENST00000553078 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
CNOT2-243ENST00000553078 CLEC4GQ6UXB4 293 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 CCDC129Q6ZRS4 1044 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
CNOT2-243ENST00000553078 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 LAMB2P55268 1798 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
CNOT2-243ENST00000553078 NUP98P52948 1817 aa12.09□□□□□ -0.47
CNOT2-243ENST00000553078 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
CNOT2-243ENST00000553078 CAMTA2O94983 1202 aa12.09□□□□□ -0.47
CNOT2-243ENST00000553078 PDE8BO95263 885 aa12.09□□□□□ -0.47
CNOT2-243ENST00000553078 CPA1P15085 419 aa12.09□□□□□ -0.47
CNOT2-243ENST00000553078 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
CNOT2-243ENST00000553078 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
CNOT2-243ENST00000553078 TRDNQ13061 729 aa12.09□□□□□ -0.47
CNOT2-243ENST00000553078 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
CNOT2-243ENST00000553078 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms