RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 DPF2Q92785 391 aa14.55□□□□□ -0.08
TMEM116-218ENST00000552839 CDCA7LQ96GN5 454 aa14.55□□□□□ -0.08
TMEM116-218ENST00000552839 GBA2Q9HCG7 927 aaPredicted RBP14.55□□□□□ -0.08
TMEM116-218ENST00000552839 AIMP1Q12904 312 aaKnown RBP14.54□□□□□ -0.08
TMEM116-218ENST00000552839 TWISTNBQ3B726 338 aaPredicted RBP14.54□□□□□ -0.08
TMEM116-218ENST00000552839 TBC1D10BQ4KMP7 808 aaPredicted RBP14.54□□□□□ -0.08
TMEM116-218ENST00000552839 HSP90AB3PQ58FF7 597 aa14.54□□□□□ -0.08
TMEM116-218ENST00000552839 HDGFL1Q5TGJ6 251 aa14.54□□□□□ -0.08
TMEM116-218ENST00000552839 DUSP27Q5VZP5 1158 aa14.54□□□□□ -0.08
TMEM116-218ENST00000552839 COPS6Q7L5N1 327 aa14.54□□□□□ -0.08
TMEM116-218ENST00000552839 KRT26Q7Z3Y9 468 aa14.54□□□□□ -0.08
TMEM116-218ENST00000552839 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
TMEM116-218ENST00000552839 PDE4DIPQ5VU43 2346 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 SH3TC1Q8TE82 1336 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 HOXB7P09629 217 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 KIF23Q02241 960 aaPredicted RBP14.53□□□□□ -0.08
TMEM116-218ENST00000552839 TCIRG1Q13488 830 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 WASHC4Q2M389 1173 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 C2orf69Q8N8R5 385 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 XAGE3Q8WTP9 111 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 NECTIN2Q92692 538 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 ZNF428Q96B54 188 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 STK31Q9BXU1 1019 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 DBNDD1Q9H9R9 158 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
TMEM116-218ENST00000552839 KCNQ5Q9NR82 932 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 SAGE1Q9NXZ1 904 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 SCN9AQ15858 1988 aa14.53□□□□□ -0.08
TMEM116-218ENST00000552839 COL4A1P02462 1669 aa14.52□□□□□ -0.08
TMEM116-218ENST00000552839 ADM5C9JUS6 153 aa14.52□□□□□ -0.09
TMEM116-218ENST00000552839 SOX10P56693 466 aa14.52□□□□□ -0.09
TMEM116-218ENST00000552839 KRT24Q2M2I5 525 aa14.52□□□□□ -0.09
TMEM116-218ENST00000552839 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
TMEM116-218ENST00000552839 TMC4Q7Z404 712 aa14.52□□□□□ -0.09
TMEM116-218ENST00000552839 CCDC102AQ96A19 550 aa14.52□□□□□ -0.09
TMEM116-218ENST00000552839 RNF186Q9NXI6 227 aa14.52□□□□□ -0.09
TMEM116-218ENST00000552839 TNRC18O15417 2968 aaPredicted RBP14.51□□□□□ -0.09
TMEM116-218ENST00000552839 RIMBP2O15034 1052 aa14.51□□□□□ -0.09
TMEM116-218ENST00000552839 TRPA1O75762 1119 aa14.51□□□□□ -0.09
TMEM116-218ENST00000552839 ZNF157P51786 506 aaPredicted RBP14.51□□□□□ -0.09
TMEM116-218ENST00000552839 CCDC30Q5VVM6 783 aa14.51□□□□□ -0.09
TMEM116-218ENST00000552839 CELF1Q92879 486 aaKnown RBP14.51□□□□□ -0.09
TMEM116-218ENST00000552839 DCPSQ96C86 337 aaKnown RBP14.51□□□□□ -0.09
TMEM116-218ENST00000552839 POLLQ9UGP5 575 aa14.51□□□□□ -0.09
TMEM116-218ENST00000552839 NSFL1CQ9UNZ2 370 aaKnown RBP14.51□□□□□ -0.09
TMEM116-218ENST00000552839 RTL9Q8NET4 1388 aa14.5□□□□□ -0.09
TMEM116-218ENST00000552839 RPS12P25398 132 aaKnown RBP14.5□□□□□ -0.09
TMEM116-218ENST00000552839 C8orf58Q8NAV2 365 aa14.5□□□□□ -0.09
TMEM116-218ENST00000552839 CSRNP1Q96S65 589 aa14.5□□□□□ -0.09
TMEM116-218ENST00000552839 C6orf229H3BNL8 230 aa14.49□□□□□ -0.09
TMEM116-218ENST00000552839 ECE2O60344 883 aa14.49□□□□□ -0.09
TMEM116-218ENST00000552839 SLC10A3P09131 477 aa14.49□□□□□ -0.09
TMEM116-218ENST00000552839 GPSM2P81274 684 aa14.49□□□□□ -0.09
TMEM116-218ENST00000552839 DOK7Q18PE1 504 aa14.49□□□□□ -0.09
TMEM116-218ENST00000552839 ASTN2O75129 1339 aaPredicted RBP14.48□□□□□ -0.09
TMEM116-218ENST00000552839 CT47B1P0C2W7 299 aaPredicted RBP14.48□□□□□ -0.09
TMEM116-218ENST00000552839 SF3B3Q15393 1217 aaKnown RBP14.48□□□□□ -0.09
TMEM116-218ENST00000552839 KIF4BQ2VIQ3 1234 aa14.48□□□□□ -0.09
TMEM116-218ENST00000552839 FAM89AQ96GI7 184 aa14.48□□□□□ -0.09
TMEM116-218ENST00000552839 GGA3Q9NZ52 723 aa14.48□□□□□ -0.09
TMEM116-218ENST00000552839 VIL1P09327 827 aaKnown RBP14.47□□□□□ -0.09
TMEM116-218ENST00000552839 SULF1Q8IWU6 871 aa14.47□□□□□ -0.09
TMEM116-218ENST00000552839 TSPYL6Q8N831 410 aa14.47□□□□□ -0.09
TMEM116-218ENST00000552839 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
TMEM116-218ENST00000552839 DBF4Q9UBU7 674 aaPredicted RBP14.47□□□□□ -0.09
TMEM116-218ENST00000552839 PSME4Q14997 1843 aa14.47□□□□□ -0.09
TMEM116-218ENST00000552839 CTU1Q7Z7A3 348 aaKnown RBP14.46□□□□□ -0.09
TMEM116-218ENST00000552839 PLBD2Q8NHP8 589 aa14.46□□□□□ -0.09
TMEM116-218ENST00000552839 TBC1D16Q8TBP0 767 aa14.46□□□□□ -0.09
TMEM116-218ENST00000552839 CDCA5Q96FF9 252 aa14.46□□□□□ -0.09
TMEM116-218ENST00000552839 EYA3Q99504 573 aa14.46□□□□□ -0.09
TMEM116-218ENST00000552839 ISCA1Q9BUE6 129 aa14.46□□□□□ -0.09
TMEM116-218ENST00000552839 CHPF2Q9P2E5 772 aa14.46□□□□□ -0.09
TMEM116-218ENST00000552839 ATP5J2-PTCD1G3V325 749 aa14.45□□□□□ -0.1
TMEM116-218ENST00000552839 RTL5Q5HYW3 569 aaPredicted RBP14.45□□□□□ -0.1
TMEM116-218ENST00000552839 RASAL3Q86YV0 1011 aa14.45□□□□□ -0.1
TMEM116-218ENST00000552839 TRMT2AQ8IZ69 625 aaKnown RBP14.45□□□□□ -0.1
TMEM116-218ENST00000552839 VAMP4O75379 141 aa14.44□□□□□ -0.1
TMEM116-218ENST00000552839 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
TMEM116-218ENST00000552839 RPS8P62241 208 aaKnown RBP14.44□□□□□ -0.1
TMEM116-218ENST00000552839 ANKRD13DQ6ZTN6 518 aa14.44□□□□□ -0.1
TMEM116-218ENST00000552839 ZC3H12CQ9C0D7 883 aaKnown RBP14.44□□□□□ -0.1
TMEM116-218ENST00000552839 HYPKQ9NX55 129 aa14.44□□□□□ -0.1
TMEM116-218ENST00000552839 PAPPA2Q9BXP8 1791 aa14.43□□□□□ -0.1
TMEM116-218ENST00000552839 DDX58O95786 925 aaKnown RBP14.43□□□□□ -0.1
TMEM116-218ENST00000552839 ANGEL2Q5VTE6 544 aaKnown RBP14.43□□□□□ -0.1
TMEM116-218ENST00000552839 PRPF38BQ5VTL8 546 aaKnown RBP14.43□□□□□ -0.1
TMEM116-218ENST00000552839 HPS5Q9UPZ3 1129 aa14.43□□□□□ -0.1
TMEM116-218ENST00000552839 IRS4O14654 1257 aaPredicted RBP14.42□□□□□ -0.1
TMEM116-218ENST00000552839 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
TMEM116-218ENST00000552839 ZNF280AP59817 542 aaPredicted RBP14.42□□□□□ -0.1
TMEM116-218ENST00000552839 SCARF1Q14162 830 aa14.42□□□□□ -0.1
TMEM116-218ENST00000552839 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
TMEM116-218ENST00000552839 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
TMEM116-218ENST00000552839 SEC31BQ9NQW1 1179 aa14.42□□□□□ -0.1
TMEM116-218ENST00000552839 PODXL2Q9NZ53 605 aa14.42□□□□□ -0.1
TMEM116-218ENST00000552839 KIF16BQ96L93 1317 aa14.41□□□□□ -0.1
TMEM116-218ENST00000552839 G3V3G9 751 aa14.41□□□□□ -0.1
TMEM116-218ENST00000552839 UFL1O94874 794 aa14.41□□□□□ -0.1
TMEM116-218ENST00000552839 FKBP1BP68106 108 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms