RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GLIS2Q9BZE0 524 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 ZNF408Q9H9D4 720 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 KCNQ5Q9NR82 932 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 ARIH1Q9Y4X5 557 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 LAMB4A4D0S4 1761 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 ABCC4O15439 1325 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 MAPK8IP3Q9UPT6 1336 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 ADAMTSL1Q8N6G6 1762 aa9□□□□□ -0.97
PRPF40B-214ENST00000551320 HSPA8P11142 646 aaKnown RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 HOXA10P31260 410 aaPredicted RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 TMPOP42166 694 aaKnown RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 GMPSP49915 693 aaPredicted RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 CXCL9Q07325 125 aa9□□□□□ -0.97
PRPF40B-214ENST00000551320 DDX10Q13206 875 aaKnown RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 TRPM4Q8TD43 1214 aa9□□□□□ -0.97
PRPF40B-214ENST00000551320 RBM17Q96I25 401 aaKnown RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 PSMD1Q99460 953 aa9□□□□□ -0.97
PRPF40B-214ENST00000551320 UTP14AQ9BVJ6 771 aaKnown RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 NYXQ9GZU5 481 aa9□□□□□ -0.97
PRPF40B-214ENST00000551320 DDX21Q9NR30 783 aaKnown RBP eCLIP9□□□□□ -0.97
PRPF40B-214ENST00000551320 WBP1LQ9NX94 342 aa9□□□□□ -0.97
PRPF40B-214ENST00000551320 EIF2AK3Q9NZJ5 1116 aaKnown RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 WDR33Q9C0J8 1336 aaKnown RBP9□□□□□ -0.97
PRPF40B-214ENST00000551320 SCN4AP35499 1836 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 YDJCA8MPS7 323 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 POTEB2H3BUK9 544 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 RIMBP2O15034 1052 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 EGFRP00533 1210 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 NEFMP07197 916 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 HIRAP54198 1017 aaPredicted RBP8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 NIM1KQ8IY84 436 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 PNISRQ8TF01 805 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 CAPNS2Q96L46 248 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 CCDC85AQ96PX6 553 aaPredicted RBP8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 CRAMP1Q96RY5 1269 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 CHPF2Q9P2E5 772 aa8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 TRMT112Q9UI30 125 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 SCAF8Q9UPN6 1271 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-214ENST00000551320 WTIPA6NIX2 430 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 ELL2O00472 640 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 CTCFP49711 727 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 DOK7Q18PE1 504 aa8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 FAM89AQ96GI7 184 aa8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 NLRP3Q96P20 1036 aa8.98□□□□□ -0.97
PRPF40B-214ENST00000551320 RASSF10A6NK89 507 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 DPYSL4O14531 572 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 SEMA3EO15041 775 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 CELF2O95319 508 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 DPP8Q6V1X1 898 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 SAMD7Q7Z3H4 446 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 PPP1R42Q7Z4L9 355 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 PNMA8AQ86V59 439 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 MPNDQ8N594 471 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 CELF1Q92879 486 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 DBNDD1Q9H9R9 158 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 ATP6V0A2Q9Y487 856 aa8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 ASTN2O75129 1339 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-214ENST00000551320 LAMB2P55268 1798 aa8.96□□□□□ -0.97
PRPF40B-214ENST00000551320 PRKCSHP14314 528 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 TCIRG1Q13488 830 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 TBC1D10BQ4KMP7 808 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 TPRNQ4KMQ1 711 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 USP48Q86UV5 1035 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 BCL2L13Q9BXK5 485 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 ZNRF3Q9ULT6 936 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 ADAMTS8Q9UP79 889 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 RIC1Q4ADV7 1423 aa8.96□□□□□ -0.98
PRPF40B-214ENST00000551320 CCDC85CA6NKD9 419 aa8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 ADM5C9JUS6 153 aa8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 GPSM2P81274 684 aa8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 PARP10Q53GL7 1025 aa8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 SLC10A5Q5PT55 438 aa8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 DDX46Q7L014 1031 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 ABHD8Q96I13 439 aa8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 PHAXQ9H814 394 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 POLLQ9UGP5 575 aa8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 CNOT7Q9UIV1 285 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-214ENST00000551320 C6orf229H3BNL8 230 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 PSMD14O00487 310 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 CHL1O00533 1208 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 GRAPQ13588 217 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 FAM161AQ3B820 660 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 HDGFL1Q5TGJ6 251 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 CC2D2BQ6DHV5 1058 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 CIAPIN1Q6FI81 312 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 SP8Q8IXZ3 490 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 GRAPLQ8TC17 118 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 PRDM10Q9NQV6 1147 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 ADARB2Q9NS39 739 aaKnown RBP8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 NSFL1CQ9UNZ2 370 aaKnown RBP8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 DUOX1Q9NRD9 1551 aa8.94□□□□□ -0.98
PRPF40B-214ENST00000551320 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 KIAA2012Q0VF49 1180 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms