RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
SCAF11-214ENST00000550893 ADH7P40394 386 aa8.19□□□□□ -1.1
SCAF11-214ENST00000550893 DCAF5Q96JK2 942 aa8.19□□□□□ -1.1
SCAF11-214ENST00000550893 SUV39H2Q9H5I1 410 aa8.19□□□□□ -1.1
SCAF11-214ENST00000550893 USP20Q9Y2K6 914 aa8.19□□□□□ -1.1
SCAF11-214ENST00000550893 MAGI3Q5TCQ9 1506 aa8.19□□□□□ -1.1
SCAF11-214ENST00000550893 KIF14Q15058 1648 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 COL8A1P27658 744 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 FAM26DQ5JW98 314 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 ETFBKMTQ8IXQ9 262 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 PNMA5Q96PV4 448 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 IGFLR1Q9H665 355 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 STARD13Q9Y3M8 1113 aa8.18□□□□□ -1.1
SCAF11-214ENST00000550893 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-214ENST00000550893 RICTORQ6R327 1708 aa8.17□□□□□ -1.1
SCAF11-214ENST00000550893 GNB5O14775 395 aa8.17□□□□□ -1.1
SCAF11-214ENST00000550893 NFKB1P19838 968 aa8.17□□□□□ -1.1
SCAF11-214ENST00000550893 BRD2P25440 801 aaKnown RBP8.17□□□□□ -1.1
SCAF11-214ENST00000550893 TBC1D8BQ0IIM8 1120 aa8.17□□□□□ -1.1
SCAF11-214ENST00000550893 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
SCAF11-214ENST00000550893 UBE2OQ9C0C9 1292 aaKnown RBP8.17□□□□□ -1.1
SCAF11-214ENST00000550893 SEPT3Q9UH03 358 aa8.17□□□□□ -1.1
SCAF11-214ENST00000550893 TIMELESSQ9UNS1 1208 aa8.17□□□□□ -1.1
SCAF11-214ENST00000550893 RTCBQ9Y3I0 505 aaKnown RBP8.17□□□□□ -1.1
SCAF11-214ENST00000550893 KRT25Q7Z3Z0 450 aa8.16□□□□□ -1.1
SCAF11-214ENST00000550893 RGL4Q8IZJ4 473 aa8.16□□□□□ -1.1
SCAF11-214ENST00000550893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCAF11-214ENST00000550893 ZFATQ9P243 1243 aa8.16□□□□□ -1.1
SCAF11-214ENST00000550893 TTBK1Q5TCY1 1321 aaPredicted RBP8.15□□□□□ -1.1
SCAF11-214ENST00000550893 CARNS1A5YM72 827 aa8.15□□□□□ -1.1
SCAF11-214ENST00000550893 PIK3R2O00459 728 aa8.15□□□□□ -1.1
SCAF11-214ENST00000550893 SASH3O75995 380 aa8.15□□□□□ -1.1
SCAF11-214ENST00000550893 ALBP02768 609 aa8.15□□□□□ -1.1
SCAF11-214ENST00000550893 TARSP26639 723 aaKnown RBP8.15□□□□□ -1.1
SCAF11-214ENST00000550893 SCNN1AP37088 669 aa8.15□□□□□ -1.1
SCAF11-214ENST00000550893 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
SCAF11-214ENST00000550893 TRIM11Q96F44 468 aa8.15□□□□□ -1.1
SCAF11-214ENST00000550893 C11orf16Q9NQ32 467 aa8.15□□□□□ -1.1
SCAF11-214ENST00000550893 DNAJB12Q9NXW2 375 aaKnown RBP8.15□□□□□ -1.1
SCAF11-214ENST00000550893 HECW1Q76N89 1606 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 M0R082 166 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 C8orf86Q6ZUL3 223 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 FAM9AQ8IZU1 332 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-214ENST00000550893 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 ZNF417Q8TAU3 575 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 ZNF587Q96SQ5 575 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-214ENST00000550893 ARID3AQ99856 593 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 SLC6A14Q9UN76 642 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 KCNMB2Q9Y691 235 aa8.14□□□□□ -1.11
SCAF11-214ENST00000550893 CDC42BPBQ9Y5S2 1711 aa8.13□□□□□ -1.11
SCAF11-214ENST00000550893 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
SCAF11-214ENST00000550893 EGFRP00533 1210 aa8.13□□□□□ -1.11
SCAF11-214ENST00000550893 C20orf204Q6ZNR8 217 aa8.13□□□□□ -1.11
SCAF11-214ENST00000550893 STIM2Q9P246 746 aa8.13□□□□□ -1.11
SCAF11-214ENST00000550893 KRBA1A5PL33 1030 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 ZBTB39O15060 712 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 XYLBO75191 536 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 ITGB2P05107 769 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 SSFA2P28290 1259 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
SCAF11-214ENST00000550893 PLA2G4EQ3MJ16 856 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 PLVAPQ9BX97 442 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 ARAP3Q8WWN8 1544 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
SCAF11-214ENST00000550893 RARAP10276 462 aa8.11□□□□□ -1.11
SCAF11-214ENST00000550893 ZAP70P43403 619 aa8.11□□□□□ -1.11
SCAF11-214ENST00000550893 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
SCAF11-214ENST00000550893 ALYREFQ86V81 257 aaKnown RBP8.11□□□□□ -1.11
SCAF11-214ENST00000550893 PRDM6Q9NQX0 595 aa8.11□□□□□ -1.11
SCAF11-214ENST00000550893 NOP53Q9NZM5 478 aaKnown RBP8.11□□□□□ -1.11
SCAF11-214ENST00000550893 MYO5CQ9NQX4 1742 aa8.11□□□□□ -1.11
SCAF11-214ENST00000550893 ZBTB42B2RXF5 422 aa8.1□□□□□ -1.11
SCAF11-214ENST00000550893 NAGPAQ9UK23 515 aa8.1□□□□□ -1.11
SCAF11-214ENST00000550893 PREX2Q70Z35 1606 aa8.1□□□□□ -1.11
SCAF11-214ENST00000550893 ZMYM4Q5VZL5 1548 aa8.09□□□□□ -1.11
SCAF11-214ENST00000550893 ARHGEF40Q8TER5 1519 aa8.09□□□□□ -1.11
SCAF11-214ENST00000550893 TEX14Q8IWB6 1497 aa8.09□□□□□ -1.11
SCAF11-214ENST00000550893 TRIP4Q15650 581 aaPredicted RBP8.09□□□□□ -1.11
SCAF11-214ENST00000550893 PHLDB3Q6NSJ2 640 aa8.09□□□□□ -1.11
SCAF11-214ENST00000550893 NUDT8Q8WV74 236 aa8.09□□□□□ -1.11
SCAF11-214ENST00000550893 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
SCAF11-214ENST00000550893 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
SCAF11-214ENST00000550893 ADAMTSL3P82987 1691 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 LILRB5O75023 590 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 NID1P14543 1247 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 CPB1P15086 417 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 MLLT1Q03111 559 aaPredicted RBP8.08□□□□□ -1.12
SCAF11-214ENST00000550893 PCSK7Q16549 785 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 PSAPL1Q6NUJ1 521 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 FAM35AQ86V20 835 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 ABTB2Q8N961 1025 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 TRPM4Q8TD43 1214 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 HELQQ8TDG4 1101 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 GPR152Q8TDT2 470 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 GTF3C2Q8WUA4 911 aaPredicted RBP8.08□□□□□ -1.12
SCAF11-214ENST00000550893 JPH1Q9HDC5 661 aaPredicted RBP8.08□□□□□ -1.12
SCAF11-214ENST00000550893 FAM13BQ9NYF5 915 aa8.08□□□□□ -1.12
SCAF11-214ENST00000550893 MMP20O60882 483 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms