RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 CHPF2Q9P2E5 772 aa14.44□□□□□ -0.1
PFDN5-212ENST00000550880 LAMB2P55268 1798 aa14.43□□□□□ -0.1
PFDN5-212ENST00000550880 VIL1P09327 827 aaKnown RBP14.43□□□□□ -0.1
PFDN5-212ENST00000550880 TMPOP42166 694 aaKnown RBP14.43□□□□□ -0.1
PFDN5-212ENST00000550880 FKBP1BP68106 108 aa14.43□□□□□ -0.1
PFDN5-212ENST00000550880 HDGFL1Q5TGJ6 251 aa14.43□□□□□ -0.1
PFDN5-212ENST00000550880 CDCA5Q96FF9 252 aa14.43□□□□□ -0.1
PFDN5-212ENST00000550880 ISCA1Q9BUE6 129 aa14.43□□□□□ -0.1
PFDN5-212ENST00000550880 ANKIB1Q9P2G1 1089 aa14.43□□□□□ -0.1
PFDN5-212ENST00000550880 DBF4Q9UBU7 674 aaPredicted RBP14.43□□□□□ -0.1
PFDN5-212ENST00000550880 LAS1LQ9Y4W2 734 aaKnown RBP14.43□□□□□ -0.1
PFDN5-212ENST00000550880 DUOX1Q9NRD9 1551 aa14.43□□□□□ -0.1
PFDN5-212ENST00000550880 ATP5J2-PTCD1G3V325 749 aa14.42□□□□□ -0.1
PFDN5-212ENST00000550880 IRS4O14654 1257 aaPredicted RBP14.42□□□□□ -0.1
PFDN5-212ENST00000550880 PKN2Q16513 984 aaKnown RBP14.42□□□□□ -0.1
PFDN5-212ENST00000550880 RTL5Q5HYW3 569 aaPredicted RBP14.42□□□□□ -0.1
PFDN5-212ENST00000550880 KCNQ5Q9NR82 932 aa14.42□□□□□ -0.1
PFDN5-212ENST00000550880 HYPKQ9NX55 129 aa14.42□□□□□ -0.1
PFDN5-212ENST00000550880 GGA1Q9UJY5 639 aa14.42□□□□□ -0.1
PFDN5-212ENST00000550880 HDAC9Q9UKV0 1011 aa14.42□□□□□ -0.1
PFDN5-212ENST00000550880 RTL9Q8NET4 1388 aa14.42□□□□□ -0.1
PFDN5-212ENST00000550880 CHL1O00533 1208 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 UFL1O94874 794 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 HOXB7P09629 217 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 SCARF1Q14162 830 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 NEUROD2Q15784 382 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 ANGEL2Q5VTE6 544 aaKnown RBP14.41□□□□□ -0.1
PFDN5-212ENST00000550880 AGBL3Q8NEM8 1001 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 PODXL2Q9NZ53 605 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 LRRC37AA6NMS7 1700 aa14.41□□□□□ -0.1
PFDN5-212ENST00000550880 ZNF280AP59817 542 aaPredicted RBP14.4□□□□□ -0.1
PFDN5-212ENST00000550880 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
PFDN5-212ENST00000550880 PRPF38BQ5VTL8 546 aaKnown RBP14.4□□□□□ -0.1
PFDN5-212ENST00000550880 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.1
PFDN5-212ENST00000550880 USP17L8P0C7I0 530 aa14.39□□□□□ -0.11
PFDN5-212ENST00000550880 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
PFDN5-212ENST00000550880 RASAL3Q86YV0 1011 aa14.39□□□□□ -0.11
PFDN5-212ENST00000550880 PITPNM2Q9BZ72 1349 aa14.39□□□□□ -0.11
PFDN5-212ENST00000550880 TAF1P21675 1872 aa14.38□□□□□ -0.11
PFDN5-212ENST00000550880 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
PFDN5-212ENST00000550880 CCDC152Q4G0S7 254 aa14.38□□□□□ -0.11
PFDN5-212ENST00000550880 RIC3Q7Z5B4 369 aa14.38□□□□□ -0.11
PFDN5-212ENST00000550880 ZBTB38Q8NAP3 1195 aaPredicted RBP14.38□□□□□ -0.11
PFDN5-212ENST00000550880 MYOZ2Q9NPC6 264 aa14.38□□□□□ -0.11
PFDN5-212ENST00000550880 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
PFDN5-212ENST00000550880 AKAP11Q9UKA4 1901 aa14.38□□□□□ -0.11
PFDN5-212ENST00000550880 ASTN2O75129 1339 aaPredicted RBP14.38□□□□□ -0.11
PFDN5-212ENST00000550880 PDE4DIPQ5VU43 2346 aa14.37□□□□□ -0.11
PFDN5-212ENST00000550880 POLR2AP24928 1970 aaKnown RBP14.37□□□□□ -0.11
PFDN5-212ENST00000550880 NF2P35240 595 aa14.37□□□□□ -0.11
PFDN5-212ENST00000550880 TTLL12Q14166 644 aaPredicted RBP14.37□□□□□ -0.11
PFDN5-212ENST00000550880 RALBP1Q15311 655 aa14.37□□□□□ -0.11
PFDN5-212ENST00000550880 DDX60Q8IY21 1712 aaKnown RBP14.37□□□□□ -0.11
PFDN5-212ENST00000550880 USP17L3A6NCW0 530 aa14.36□□□□□ -0.11
PFDN5-212ENST00000550880 USP17L4A6NCW7 530 aa14.36□□□□□ -0.11
PFDN5-212ENST00000550880 USP17L1Q7RTZ2 530 aa14.36□□□□□ -0.11
PFDN5-212ENST00000550880 PODNQ7Z5L7 613 aa14.36□□□□□ -0.11
PFDN5-212ENST00000550880 OGFOD1Q8N543 542 aa14.36□□□□□ -0.11
PFDN5-212ENST00000550880 SEC31BQ9NQW1 1179 aa14.36□□□□□ -0.11
PFDN5-212ENST00000550880 XDHP47989 1333 aa14.36□□□□□ -0.11
PFDN5-212ENST00000550880 ZNF609O15014 1411 aa14.35□□□□□ -0.11
PFDN5-212ENST00000550880 PDE8AO60658 829 aa14.35□□□□□ -0.11
PFDN5-212ENST00000550880 TBC1D8O95759 1140 aa14.35□□□□□ -0.11
PFDN5-212ENST00000550880 ATP2B4P23634 1241 aa14.35□□□□□ -0.11
PFDN5-212ENST00000550880 DUSP27Q5VZP5 1158 aa14.35□□□□□ -0.11
PFDN5-212ENST00000550880 ANKRD18AQ8IVF6 992 aa14.35□□□□□ -0.11
PFDN5-212ENST00000550880 CCDC146Q8IYE0 955 aa14.35□□□□□ -0.11
PFDN5-212ENST00000550880 ZNF296Q8WUU4 475 aaPredicted RBP14.35□□□□□ -0.11
PFDN5-212ENST00000550880 TNRC18O15417 2968 aaPredicted RBP14.34□□□□□ -0.11
PFDN5-212ENST00000550880 UBE2Q2LH0YL09 131 aa14.34□□□□□ -0.11
PFDN5-212ENST00000550880 SREBF2Q12772 1141 aa14.34□□□□□ -0.11
PFDN5-212ENST00000550880 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
PFDN5-212ENST00000550880 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
PFDN5-212ENST00000550880 RUNDC1Q96C34 613 aa14.34□□□□□ -0.11
PFDN5-212ENST00000550880 PAPPA2Q9BXP8 1791 aa14.33□□□□□ -0.12
PFDN5-212ENST00000550880 PCCAP05165 728 aaPredicted RBP14.33□□□□□ -0.12
PFDN5-212ENST00000550880 TM4SF4P48230 202 aa14.33□□□□□ -0.12
PFDN5-212ENST00000550880 MMP14P50281 582 aa14.33□□□□□ -0.12
PFDN5-212ENST00000550880 NOM1Q5C9Z4 860 aaKnown RBP14.33□□□□□ -0.12
PFDN5-212ENST00000550880 GMLQ99445 158 aa14.33□□□□□ -0.12
PFDN5-212ENST00000550880 CDC5LQ99459 802 aaKnown RBP14.33□□□□□ -0.12
PFDN5-212ENST00000550880 MYD88Q99836 296 aa14.33□□□□□ -0.12
PFDN5-212ENST00000550880 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.12
PFDN5-212ENST00000550880 CWC25Q9NXE8 425 aaPredicted RBP14.33□□□□□ -0.12
PFDN5-212ENST00000550880 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.12
PFDN5-212ENST00000550880 GPR25O00155 361 aa14.32□□□□□ -0.12
PFDN5-212ENST00000550880 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
PFDN5-212ENST00000550880 FBXO46Q6PJ61 603 aaPredicted RBP14.32□□□□□ -0.12
PFDN5-212ENST00000550880 MOB2Q70IA6 237 aa14.32□□□□□ -0.12
PFDN5-212ENST00000550880 ARMC9Q7Z3E5 817 aa14.32□□□□□ -0.12
PFDN5-212ENST00000550880 FBXW7Q969H0 707 aa14.32□□□□□ -0.12
PFDN5-212ENST00000550880 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
PFDN5-212ENST00000550880 CCDC85AQ96PX6 553 aaPredicted RBP14.32□□□□□ -0.12
PFDN5-212ENST00000550880 MYO3BQ8WXR4 1341 aa14.32□□□□□ -0.12
PFDN5-212ENST00000550880 FKTNO75072 461 aa14.31□□□□□ -0.12
PFDN5-212ENST00000550880 ALDH1A1P00352 501 aa14.3□□□□□ -0.12
PFDN5-212ENST00000550880 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
PFDN5-212ENST00000550880 MKRN3Q13064 507 aaKnown RBP14.3□□□□□ -0.12
PFDN5-212ENST00000550880 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
PFDN5-212ENST00000550880 PRAMEF18Q5VWM3 479 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms