RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 HMMRO75330 724 aa26.67■■□□□ 1.86
NEK3-202ENST00000550841 PTPN12Q05209 780 aaKnown RBP26.67■■□□□ 1.86
NEK3-202ENST00000550841 DPP8Q6V1X1 898 aaPredicted RBP26.67■■□□□ 1.86
NEK3-202ENST00000550841 SUPT20HQ8NEM7 779 aa26.67■■□□□ 1.86
NEK3-202ENST00000550841 SSH3Q8TE77 659 aa26.67■■□□□ 1.86
NEK3-202ENST00000550841 COPRSQ9NQ92 184 aa26.67■■□□□ 1.86
NEK3-202ENST00000550841 ANKIB1Q9P2G1 1089 aa26.67■■□□□ 1.86
NEK3-202ENST00000550841 NSFL1CQ9UNZ2 370 aaKnown RBP26.67■■□□□ 1.86
NEK3-202ENST00000550841 PNMA6EA0A0J9YXQ4 647 aa26.66■■□□□ 1.86
NEK3-202ENST00000550841 FKBP4Q02790 459 aaKnown RBP eCLIP26.66■■□□□ 1.86
NEK3-202ENST00000550841 OLFM4Q6UX06 510 aa26.66■■□□□ 1.86
NEK3-202ENST00000550841 PSMD1Q99460 953 aa26.66■■□□□ 1.86
NEK3-202ENST00000550841 PODXL2Q9NZ53 605 aa26.66■■□□□ 1.86
NEK3-202ENST00000550841 POLA2Q14181 598 aa26.65■■□□□ 1.86
NEK3-202ENST00000550841 TAOK3Q9H2K8 898 aa26.65■■□□□ 1.86
NEK3-202ENST00000550841 MROH5Q6ZUA9 1318 aa26.65■■□□□ 1.86
NEK3-202ENST00000550841 LTBP3Q9NS15 1303 aa26.65■■□□□ 1.86
NEK3-202ENST00000550841 EYA2O00167 538 aa26.64■■□□□ 1.86
NEK3-202ENST00000550841 CIAO1O76071 339 aa26.64■■□□□ 1.86
NEK3-202ENST00000550841 GPSM2P81274 684 aa26.64■■□□□ 1.86
NEK3-202ENST00000550841 KLHDC4Q8TBB5 520 aa26.64■■□□□ 1.86
NEK3-202ENST00000550841 VPS33BQ9H267 617 aa26.64■■□□□ 1.86
NEK3-202ENST00000550841 RIPOR2Q9Y4F9 1068 aa26.64■■□□□ 1.86
NEK3-202ENST00000550841 XDHP47989 1333 aa26.64■■□□□ 1.85
NEK3-202ENST00000550841 ATP2B4P23634 1241 aa26.63■■□□□ 1.85
NEK3-202ENST00000550841 CHRNDQ07001 517 aa26.63■■□□□ 1.85
NEK3-202ENST00000550841 RTFDC1Q9BY42 306 aaPredicted RBP26.63■■□□□ 1.85
NEK3-202ENST00000550841 GGA1Q9UJY5 639 aa26.63■■□□□ 1.85
NEK3-202ENST00000550841 G3BP1Q13283 466 aaKnown RBP eCLIP26.62■■□□□ 1.85
NEK3-202ENST00000550841 PUS3Q9BZE2 481 aaKnown RBP26.62■■□□□ 1.85
NEK3-202ENST00000550841 LEMD3Q9Y2U8 911 aa26.62■■□□□ 1.85
NEK3-202ENST00000550841 COL4A1P02462 1669 aa26.62■■□□□ 1.85
NEK3-202ENST00000550841 NFKBIEO00221 500 aa26.61■■□□□ 1.85
NEK3-202ENST00000550841 IL15P40933 162 aaPredicted RBP26.61■■□□□ 1.85
NEK3-202ENST00000550841 LRRC24Q50LG9 513 aa26.61■■□□□ 1.85
NEK3-202ENST00000550841 EXOC6Q8TAG9 804 aa26.61■■□□□ 1.85
NEK3-202ENST00000550841 EYA3Q99504 573 aa26.61■■□□□ 1.85
NEK3-202ENST00000550841 PA2G4Q9UQ80 394 aaKnown RBP26.61■■□□□ 1.85
NEK3-202ENST00000550841 FER1L6Q2WGJ9 1857 aa26.6■■□□□ 1.85
NEK3-202ENST00000550841 C6orf229H3BNL8 230 aa26.6■■□□□ 1.85
NEK3-202ENST00000550841 HSPA6P17066 643 aa26.6■■□□□ 1.85
NEK3-202ENST00000550841 METTL24Q5JXM2 366 aa26.6■■□□□ 1.85
NEK3-202ENST00000550841 SIL1Q9H173 461 aa26.6■■□□□ 1.85
NEK3-202ENST00000550841 SPEF2Q9C093 1822 aa26.6■■□□□ 1.85
NEK3-202ENST00000550841 LRRC37AA6NMS7 1700 aa26.59■■□□□ 1.85
NEK3-202ENST00000550841 LMNB1P20700 586 aa26.59■■□□□ 1.85
NEK3-202ENST00000550841 KCNJ4P48050 445 aa26.59■■□□□ 1.85
NEK3-202ENST00000550841 TBC1D16Q8TBP0 767 aa26.59■■□□□ 1.85
NEK3-202ENST00000550841 CEP126Q9P2H0 1117 aa26.59■■□□□ 1.85
NEK3-202ENST00000550841 SNED1Q8TER0 1413 aa26.58■■□□□ 1.85
NEK3-202ENST00000550841 SURF6O75683 361 aaKnown RBP26.58■■□□□ 1.85
NEK3-202ENST00000550841 UFL1O94874 794 aa26.58■■□□□ 1.85
NEK3-202ENST00000550841 IRX6P78412 446 aaPredicted RBP26.58■■□□□ 1.85
NEK3-202ENST00000550841 HSP90AB4PQ58FF6 505 aa26.58■■□□□ 1.85
NEK3-202ENST00000550841 NOP58Q9Y2X3 529 aaKnown RBP26.58■■□□□ 1.85
NEK3-202ENST00000550841 KIF3CO14782 793 aa26.57■■□□□ 1.84
NEK3-202ENST00000550841 RASSF7Q02833 373 aa26.57■■□□□ 1.84
NEK3-202ENST00000550841 ATG9AQ7Z3C6 839 aa26.57■■□□□ 1.84
NEK3-202ENST00000550841 SIRT2Q8IXJ6 389 aa26.57■■□□□ 1.84
NEK3-202ENST00000550841 POLLQ9UGP5 575 aa26.57■■□□□ 1.84
NEK3-202ENST00000550841 NEFLP07196 543 aa26.56■■□□□ 1.84
NEK3-202ENST00000550841 OS9Q13438 667 aaPredicted RBP26.56■■□□□ 1.84
NEK3-202ENST00000550841 WASHC4Q2M389 1173 aa26.56■■□□□ 1.84
NEK3-202ENST00000550841 SLC51AQ86UW1 340 aa26.56■■□□□ 1.84
NEK3-202ENST00000550841 HELBQ8NG08 1087 aaPredicted RBP26.56■■□□□ 1.84
NEK3-202ENST00000550841 ZC3H12CQ9C0D7 883 aaKnown RBP26.56■■□□□ 1.84
NEK3-202ENST00000550841 ZNF277Q9NRM2 450 aaPredicted RBP26.56■■□□□ 1.84
NEK3-202ENST00000550841 TAF5LO75529 589 aa26.55■■□□□ 1.84
NEK3-202ENST00000550841 PDE8BO95263 885 aa26.55■■□□□ 1.84
NEK3-202ENST00000550841 IARSP41252 1262 aaKnown RBP26.55■■□□□ 1.84
NEK3-202ENST00000550841 UBE4AQ14139 1066 aa26.55■■□□□ 1.84
NEK3-202ENST00000550841 PCDHB15Q9Y5E8 787 aa26.55■■□□□ 1.84
NEK3-202ENST00000550841 ZNF804BA4D1E1 1349 aa26.55■■□□□ 1.84
NEK3-202ENST00000550841 ERC1Q8IUD2 1116 aa26.54■■□□□ 1.84
NEK3-202ENST00000550841 PPIP5K2O43314 1243 aa26.53■■□□□ 1.84
NEK3-202ENST00000550841 C9orf131Q5VYM1 1079 aa26.53■■□□□ 1.84
NEK3-202ENST00000550841 LARGE2Q8N3Y3 721 aa26.53■■□□□ 1.84
NEK3-202ENST00000550841 KIAA2012Q0VF49 1180 aa26.52■■□□□ 1.84
NEK3-202ENST00000550841 VGLL2Q8N8G2 317 aa26.52■■□□□ 1.84
NEK3-202ENST00000550841 JDP2Q8WYK2 163 aa26.52■■□□□ 1.84
NEK3-202ENST00000550841 RNF181Q9P0P0 153 aa26.52■■□□□ 1.84
NEK3-202ENST00000550841 AKAP2Q9Y2D5 859 aa26.52■■□□□ 1.84
NEK3-202ENST00000550841 G3V3G9 751 aa26.51■■□□□ 1.83
NEK3-202ENST00000550841 RAB11FIP3O75154 756 aa26.51■■□□□ 1.83
NEK3-202ENST00000550841 PUM3Q15397 648 aaKnown RBP26.51■■□□□ 1.83
NEK3-202ENST00000550841 DCAF8Q5TAQ9 597 aa26.51■■□□□ 1.83
NEK3-202ENST00000550841 RIMBP2O15034 1052 aa26.5■■□□□ 1.83
NEK3-202ENST00000550841 TOMM70O94826 608 aa26.5■■□□□ 1.83
NEK3-202ENST00000550841 AOC3Q16853 763 aa26.5■■□□□ 1.83
NEK3-202ENST00000550841 C15orf52Q6ZUT6 534 aaKnown RBP26.5■■□□□ 1.83
NEK3-202ENST00000550841 SBF1O95248 1867 aa26.49■■□□□ 1.83
NEK3-202ENST00000550841 LTBP1Q14766 1721 aa26.49■■□□□ 1.83
NEK3-202ENST00000550841 IFIT1P09914 478 aaKnown RBP26.49■■□□□ 1.83
NEK3-202ENST00000550841 LPIN2Q92539 896 aa26.49■■□□□ 1.83
NEK3-202ENST00000550841 RWDD1Q9H446 243 aaPredicted RBP26.49■■□□□ 1.83
NEK3-202ENST00000550841 MED23Q9ULK4 1368 aa26.48■■□□□ 1.83
NEK3-202ENST00000550841 SLC5A1P13866 664 aa26.48■■□□□ 1.83
NEK3-202ENST00000550841 TFCP2Q12800 502 aa26.48■■□□□ 1.83
NEK3-202ENST00000550841 HDAC1Q13547 482 aaPredicted RBP26.48■■□□□ 1.83
NEK3-202ENST00000550841 NIM1KQ8IY84 436 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms