RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 COL4A1P02462 1669 aa11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 NBPF7P0C2Y1 421 aaPredicted RBP11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 FOXO4P98177 505 aa11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 CACNA1SQ13698 1873 aa11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 ANKRD18AQ8IVF6 992 aa11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 MPNDQ8N594 471 aa11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 SNED1Q8TER0 1413 aa11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 PSMD1Q99460 953 aa11.22□□□□□ -0.61
SMARCC2-205ENST00000548130 LAMB2P55268 1798 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 CSF1RP07333 972 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 TRIM27P14373 513 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 ITGA6P23229 1130 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 IARSP41252 1262 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 GPSM2P81274 684 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 LMBR1LQ6UX01 489 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 TMC4Q7Z404 712 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 ARHGAP45Q92619 1136 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 CDC5LQ99459 802 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 USP44Q9H0E7 712 aa11.21□□□□□ -0.61
SMARCC2-205ENST00000548130 UTYO14607 1347 aa11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 ATF7IPQ6VMQ6 1270 aa11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 CLUAP1Q96AJ1 413 aa11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 KAZALD1Q96I82 304 aa11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 NSFL1CQ9UNZ2 370 aaKnown RBP11.2□□□□□ -0.62
SMARCC2-205ENST00000548130 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 IGHMBP2P38935 993 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 AOC3Q16853 763 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 ZKSCAN2Q63HK3 967 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 TAF1P21675 1872 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
SMARCC2-205ENST00000548130 IFIT5Q13325 482 aaKnown RBP11.18□□□□□ -0.62
SMARCC2-205ENST00000548130 ANKRD44Q8N8A2 993 aa11.18□□□□□ -0.62
SMARCC2-205ENST00000548130 SUPT20HQ8NEM7 779 aa11.18□□□□□ -0.62
SMARCC2-205ENST00000548130 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
SMARCC2-205ENST00000548130 BSDC1Q9NW68 430 aaPredicted RBP11.18□□□□□ -0.62
SMARCC2-205ENST00000548130 ANKIB1Q9P2G1 1089 aa11.18□□□□□ -0.62
SMARCC2-205ENST00000548130 POLLQ9UGP5 575 aa11.18□□□□□ -0.62
SMARCC2-205ENST00000548130 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 GSE1Q14687 1217 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 NIM1KQ8IY84 436 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 TMEM57Q8N5G2 664 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 TBC1D16Q8TBP0 767 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 JDP2Q8WYK2 163 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 MEIS3Q99687 375 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 NMRK2Q9NPI5 230 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 RCAN3Q9UKA8 241 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 MINPP1Q9UNW1 487 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 PCDHB13Q9Y5F0 798 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 SBF1O95248 1867 aa11.17□□□□□ -0.62
SMARCC2-205ENST00000548130 KDM2BQ8NHM5 1336 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 GLTPD2A6NH11 291 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 UFL1O94874 794 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 KIAA2012Q0VF49 1180 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 RABL6Q3YEC7 729 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 PODXL2Q9NZ53 605 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
SMARCC2-205ENST00000548130 XDHP47989 1333 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 COL4A5P29400 1685 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 WTIPA6NIX2 430 aaPredicted RBP11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 FZD9O00144 591 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 RLBP1P12271 317 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 ATP2B4P23634 1241 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 TIE1P35590 1138 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 EIF6P56537 245 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 FTSJ3Q8IY81 847 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 DZIP1LQ8IYY4 767 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 LRRFIP2Q9Y608 721 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-205ENST00000548130 KIF3CO14782 793 aa11.14□□□□□ -0.63
SMARCC2-205ENST00000548130 PLIN1O60240 522 aa11.14□□□□□ -0.63
SMARCC2-205ENST00000548130 CHRNDQ07001 517 aa11.14□□□□□ -0.63
SMARCC2-205ENST00000548130 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
SMARCC2-205ENST00000548130 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
SMARCC2-205ENST00000548130 ITPRIPQ8IWB1 547 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms