RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 NSFL1CQ9UNZ2 370 aaKnown RBP6.59□□□□□ -1.35
AC078880.2-201ENST00000547948 TMEM94Q12767 1356 aa6.58□□□□□ -1.36
AC078880.2-201ENST00000547948 TTC21BQ7Z4L5 1316 aa6.58□□□□□ -1.36
AC078880.2-201ENST00000547948 MX2P20592 715 aa6.58□□□□□ -1.36
AC078880.2-201ENST00000547948 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
AC078880.2-201ENST00000547948 HSPA2P54652 639 aa6.58□□□□□ -1.36
AC078880.2-201ENST00000547948 POU4F2Q12837 409 aa6.58□□□□□ -1.36
AC078880.2-201ENST00000547948 C19orf44Q9H6X5 657 aa6.58□□□□□ -1.36
AC078880.2-201ENST00000547948 KIF24Q5T7B8 1368 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 MAPK8IP3Q9UPT6 1336 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 MTHFSP49914 203 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 NME9Q86XW9 330 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 C1orf167Q5SNV9 1468 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 USP54Q70EL1 1684 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 SSH2Q76I76 1423 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 RTL1A6NKG5 1358 aa6.57□□□□□ -1.36
AC078880.2-201ENST00000547948 COL3A1P02461 1466 aaPredicted RBP6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 ATP5J2-PTCD1G3V325 749 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 DIAPH1O60610 1272 aaKnown RBP6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 AP1G2O75843 785 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 FURINP09958 794 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 BAG6P46379 1132 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 ESCO1Q5FWF5 840 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 SH3D19Q5HYK7 790 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 SLC27A3Q5K4L6 730 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 PPP2R2DQ66LE6 453 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 PNMA1Q8ND90 353 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 PMFBP1Q8TBY8 1022 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 PCMTD1Q96MG8 357 aaPredicted RBP6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 DYRK1BQ9Y463 629 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 FLT4P35916 1363 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 PNPLA6Q8IY17 1366 aa6.56□□□□□ -1.36
AC078880.2-201ENST00000547948 SHPRHQ149N8 1683 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 NPHP3Q7Z494 1330 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 KRBA1A5PL33 1030 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 OIP5O43482 229 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 U2AF1L5P0DN76 240 aaPredicted RBP6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 SNRPNP63162 240 aaKnown RBP6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 U2AF1Q01081 240 aaKnown RBP eCLIP6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 PSME1Q06323 249 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 Q8N3U1 123 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 KCNH5Q8NCM2 988 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 EPS8L1Q8TE68 723 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 RUNDC1Q96C34 613 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 NLRP3Q96P20 1036 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 ARID3AQ99856 593 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 RRAGCQ9HB90 399 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 MST1RQ04912 1400 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 SBNO1A3KN83 1393 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 PIK3C2AO00443 1686 aa6.55□□□□□ -1.36
AC078880.2-201ENST00000547948 IQSEC2Q5JU85 1478 aa6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 A0A1W2PRU2 124 aa6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 ESPNB1AK53 854 aa6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 CLUAP1Q96AJ1 413 aa6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 LRRC4BQ9NT99 713 aa6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 STRCQ7RTU9 1775 aa6.54□□□□□ -1.36
AC078880.2-201ENST00000547948 A6NJR5 290 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 APBB1O00213 710 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 GPC1P35052 558 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 LMOD3Q0VAK6 560 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 SKIV2LQ15477 1246 aaKnown RBP6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 ABTB2Q8N961 1025 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 PROCA1Q8NCQ7 364 aaPredicted RBP6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 OXCT2Q9BYC2 517 aaPredicted RBP6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 POLKQ9UBT6 870 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 MKL2Q9ULH7 1088 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 ARHGEF10O15013 1369 aa6.53□□□□□ -1.36
AC078880.2-201ENST00000547948 TNS3Q68CZ2 1445 aa6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 SLIT3O75094 1523 aa6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 E9PSI1 815 aa6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 AMPHP49418 695 aa6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 CALD1Q05682 793 aaKnown RBP6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 MCM6Q14566 821 aa6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 SEPT12Q8IYM1 358 aa6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 NUCKS1Q9H1E3 243 aaKnown RBP6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 TIMMDC1Q9NPL8 285 aa6.52□□□□□ -1.37
AC078880.2-201ENST00000547948 ZNF335Q9H4Z2 1342 aaPredicted RBP6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 ABCC6O95255 1503 aa6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 TRAK2O60296 914 aa6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 GIGYF1O75420 1035 aaPredicted RBP6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 MAP2K3P46734 347 aa6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 CCDC27Q2M243 656 aa6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 NBPF10Q6P3W6 841 aaKnown RBP6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 CCDC146Q8IYE0 955 aa6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 NBPF15Q8N660 670 aa6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 MED1Q15648 1581 aaPredicted RBP6.51□□□□□ -1.37
AC078880.2-201ENST00000547948 NFAT5O94916 1531 aa6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 PHRF1Q9P1Y6 1649 aaKnown RBP6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 STRCP1A6NGW2 1772 aa6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 SHISA8B8ZZ34 492 aa6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 APAF1O14727 1248 aa6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 F11P03951 625 aa6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 RRS1Q15050 365 aaKnown RBP6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 ERICH6BQ5W0A0 696 aa6.5□□□□□ -1.37
AC078880.2-201ENST00000547948 KRT28Q7Z3Y7 464 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms