RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 RIPOR2Q9Y4F9 1068 aa20.3■□□□□ 0.84
LIMS2-217ENST00000545738 SNAP23O00161 211 aa20.3■□□□□ 0.84
LIMS2-217ENST00000545738 IGHMBP2P38935 993 aaKnown RBP20.3■□□□□ 0.84
LIMS2-217ENST00000545738 LDHAL6AQ6ZMR3 332 aa20.3■□□□□ 0.84
LIMS2-217ENST00000545738 TAF7LQ5H9L4 462 aa20.29■□□□□ 0.84
LIMS2-217ENST00000545738 SP8Q8IXZ3 490 aa20.29■□□□□ 0.84
LIMS2-217ENST00000545738 PRELPP51888 382 aa20.28■□□□□ 0.84
LIMS2-217ENST00000545738 GPSM2P81274 684 aa20.28■□□□□ 0.84
LIMS2-217ENST00000545738 HELBQ8NG08 1087 aaPredicted RBP20.28■□□□□ 0.84
LIMS2-217ENST00000545738 MPHOSPH8Q99549 860 aa20.28■□□□□ 0.84
LIMS2-217ENST00000545738 EYA2O00167 538 aa20.27■□□□□ 0.84
LIMS2-217ENST00000545738 NFKBIEO00221 500 aa20.27■□□□□ 0.84
LIMS2-217ENST00000545738 CHRNDQ07001 517 aa20.27■□□□□ 0.84
LIMS2-217ENST00000545738 VGLL2Q8N8G2 317 aa20.27■□□□□ 0.84
LIMS2-217ENST00000545738 TAF5LO75529 589 aa20.27■□□□□ 0.83
LIMS2-217ENST00000545738 CNNM1Q9NRU3 951 aa20.27■□□□□ 0.83
LIMS2-217ENST00000545738 EXOC6BQ9Y2D4 811 aa20.27■□□□□ 0.83
LIMS2-217ENST00000545738 GPR101Q96P66 508 aaPredicted RBP20.26■□□□□ 0.83
LIMS2-217ENST00000545738 RASSF7Q02833 373 aa20.25■□□□□ 0.83
LIMS2-217ENST00000545738 POLLQ9UGP5 575 aa20.25■□□□□ 0.83
LIMS2-217ENST00000545738 NOP58Q9Y2X3 529 aaKnown RBP20.25■□□□□ 0.83
LIMS2-217ENST00000545738 COL4A5P29400 1685 aa20.25■□□□□ 0.83
LIMS2-217ENST00000545738 SASH1O94885 1247 aa20.24■□□□□ 0.83
LIMS2-217ENST00000545738 IGHDP01880 384 aa20.24■□□□□ 0.83
LIMS2-217ENST00000545738 GPR162Q16538 588 aa20.24■□□□□ 0.83
LIMS2-217ENST00000545738 TMC4Q7Z404 712 aa20.24■□□□□ 0.83
LIMS2-217ENST00000545738 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
LIMS2-217ENST00000545738 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
LIMS2-217ENST00000545738 CIAO1O76071 339 aa20.24■□□□□ 0.83
LIMS2-217ENST00000545738 KLRK1P26718 216 aa20.24■□□□□ 0.83
LIMS2-217ENST00000545738 CCDC93Q567U6 631 aa20.24■□□□□ 0.83
LIMS2-217ENST00000545738 SBF1O95248 1867 aa20.23■□□□□ 0.83
LIMS2-217ENST00000545738 AAMPQ13685 434 aa20.23■□□□□ 0.83
LIMS2-217ENST00000545738 PODXL2Q9NZ53 605 aa20.23■□□□□ 0.83
LIMS2-217ENST00000545738 CCDC88AQ3V6T2 1871 aa20.23■□□□□ 0.83
LIMS2-217ENST00000545738 IRS2Q9Y4H2 1338 aa20.22■□□□□ 0.83
LIMS2-217ENST00000545738 MPNDQ8N594 471 aa20.22■□□□□ 0.83
LIMS2-217ENST00000545738 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
LIMS2-217ENST00000545738 ANKIB1Q9P2G1 1089 aa20.22■□□□□ 0.83
LIMS2-217ENST00000545738 XDHP47989 1333 aa20.21■□□□□ 0.83
LIMS2-217ENST00000545738 HMMRO75330 724 aa20.21■□□□□ 0.83
LIMS2-217ENST00000545738 TFCP2Q12800 502 aa20.21■□□□□ 0.83
LIMS2-217ENST00000545738 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
LIMS2-217ENST00000545738 METTL24Q5JXM2 366 aa20.21■□□□□ 0.83
LIMS2-217ENST00000545738 DPP8Q6V1X1 898 aaPredicted RBP20.21■□□□□ 0.83
LIMS2-217ENST00000545738 TXNRD3Q86VQ6 643 aa20.21■□□□□ 0.83
LIMS2-217ENST00000545738 RTFDC1Q9BY42 306 aaPredicted RBP20.21■□□□□ 0.83
LIMS2-217ENST00000545738 FBXO3Q9UK99 471 aa20.21■□□□□ 0.83
LIMS2-217ENST00000545738 MROH5Q6ZUA9 1318 aa20.21■□□□□ 0.83
LIMS2-217ENST00000545738 IL15P40933 162 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-217ENST00000545738 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
LIMS2-217ENST00000545738 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
LIMS2-217ENST00000545738 DCTPP1Q9H773 170 aa20.2■□□□□ 0.82
LIMS2-217ENST00000545738 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-217ENST00000545738 APBB1O00213 710 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 UFL1O94874 794 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 PDE8BO95263 885 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 FKBP4Q02790 459 aaKnown RBP eCLIP20.19■□□□□ 0.82
LIMS2-217ENST00000545738 RTKN2Q8IZC4 609 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 PSMD1Q99460 953 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 NEFLP07196 543 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 FGFR2P21802 821 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 G3BP1Q13283 466 aaKnown RBP eCLIP20.19■□□□□ 0.82
LIMS2-217ENST00000545738 SOGA3Q5TF21 947 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 TAOK3Q9H2K8 898 aa20.19■□□□□ 0.82
LIMS2-217ENST00000545738 ANKRD2Q9GZV1 360 aa20.18■□□□□ 0.82
LIMS2-217ENST00000545738 GGA1Q9UJY5 639 aa20.18■□□□□ 0.82
LIMS2-217ENST00000545738 ZNF804BA4D1E1 1349 aa20.18■□□□□ 0.82
LIMS2-217ENST00000545738 LTBP3Q9NS15 1303 aa20.17■□□□□ 0.82
LIMS2-217ENST00000545738 ZNF609O15014 1411 aa20.17■□□□□ 0.82
LIMS2-217ENST00000545738 ARAP2Q8WZ64 1704 aa20.17■□□□□ 0.82
LIMS2-217ENST00000545738 C6orf229H3BNL8 230 aa20.16■□□□□ 0.82
LIMS2-217ENST00000545738 CHD4Q14839 1912 aa20.16■□□□□ 0.82
LIMS2-217ENST00000545738 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-217ENST00000545738 OS9Q13438 667 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-217ENST00000545738 AOC3Q16853 763 aa20.16■□□□□ 0.82
LIMS2-217ENST00000545738 RHPN1Q8TCX5 695 aa20.16■□□□□ 0.82
LIMS2-217ENST00000545738 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
LIMS2-217ENST00000545738 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
LIMS2-217ENST00000545738 RIMBP2O15034 1052 aa20.15■□□□□ 0.82
LIMS2-217ENST00000545738 ATP2B4P23634 1241 aa20.15■□□□□ 0.82
LIMS2-217ENST00000545738 ADORA1P30542 326 aa20.15■□□□□ 0.82
LIMS2-217ENST00000545738 TIMM10P62072 90 aa20.15■□□□□ 0.82
LIMS2-217ENST00000545738 LEMD3Q9Y2U8 911 aa20.15■□□□□ 0.82
LIMS2-217ENST00000545738 SCN9AQ15858 1988 aa20.15■□□□□ 0.82
LIMS2-217ENST00000545738 DICER1Q9UPY3 1922 aaKnown RBP20.15■□□□□ 0.82
LIMS2-217ENST00000545738 EAF2Q96CJ1 260 aaPredicted RBP20.14■□□□□ 0.81
LIMS2-217ENST00000545738 TMX4Q9H1E5 349 aaPredicted RBP20.14■□□□□ 0.81
LIMS2-217ENST00000545738 TLR7Q9NYK1 1049 aaKnown RBP20.14■□□□□ 0.81
LIMS2-217ENST00000545738 MED23Q9ULK4 1368 aa20.14■□□□□ 0.81
LIMS2-217ENST00000545738 GRIN3BO60391 1043 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 UBE4AQ14139 1066 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 PUM3Q15397 648 aaKnown RBP20.13■□□□□ 0.81
LIMS2-217ENST00000545738 SMC5Q8IY18 1101 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 A0A1B0GUL7 405 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
LIMS2-217ENST00000545738 KIAA2012Q0VF49 1180 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 WASHC4Q2M389 1173 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 GRIPAP1Q4V328 841 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms