RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 BABAM1Q9NWV8 329 aa15.06■□□□□ 0
TMEM258-208ENST00000545210 GGA3Q9NZ52 723 aa15.06■□□□□ 0
TMEM258-208ENST00000545210 ASTN2O75129 1339 aaPredicted RBP15.06■□□□□ 0
TMEM258-208ENST00000545210 SF3B3Q15393 1217 aaKnown RBP15.05■□□□□ -0
TMEM258-208ENST00000545210 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ -0
TMEM258-208ENST00000545210 EYA3Q99504 573 aa15.05■□□□□ -0
TMEM258-208ENST00000545210 CHPF2Q9P2E5 772 aa15.05■□□□□ -0
TMEM258-208ENST00000545210 PAPPA2Q9BXP8 1791 aa15.05■□□□□ -0
TMEM258-208ENST00000545210 SPEF2Q9C093 1822 aa15.05■□□□□ -0
TMEM258-208ENST00000545210 ATP5J2-PTCD1G3V325 749 aa15.04■□□□□ -0
TMEM258-208ENST00000545210 CTU1Q7Z7A3 348 aaKnown RBP15.04■□□□□ -0
TMEM258-208ENST00000545210 PLBD2Q8NHP8 589 aa15.04■□□□□ -0
TMEM258-208ENST00000545210 TBC1D16Q8TBP0 767 aa15.04■□□□□ -0
TMEM258-208ENST00000545210 CDCA5Q96FF9 252 aa15.04■□□□□ -0
TMEM258-208ENST00000545210 VIL1P09327 827 aaKnown RBP15.03■□□□□ -0
TMEM258-208ENST00000545210 ANKRD13DQ6ZTN6 518 aa15.03■□□□□ -0
TMEM258-208ENST00000545210 ISCA1Q9BUE6 129 aa15.03■□□□□ -0
TMEM258-208ENST00000545210 ZC3H12CQ9C0D7 883 aaKnown RBP15.03■□□□□ -0
TMEM258-208ENST00000545210 ZNF646O15015 1829 aaPredicted RBP15.02■□□□□ -0
TMEM258-208ENST00000545210 TMPOP42166 694 aaKnown RBP15.02■□□□□ -0
TMEM258-208ENST00000545210 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
TMEM258-208ENST00000545210 ANGEL2Q5VTE6 544 aaKnown RBP15.02■□□□□ -0
TMEM258-208ENST00000545210 RASAL3Q86YV0 1011 aa15.02■□□□□ -0
TMEM258-208ENST00000545210 G3V3G9 751 aa15.01□□□□□ -0.01
TMEM258-208ENST00000545210 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
TMEM258-208ENST00000545210 SCARF1Q14162 830 aa15.01□□□□□ -0.01
TMEM258-208ENST00000545210 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
TMEM258-208ENST00000545210 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
TMEM258-208ENST00000545210 LAS1LQ9Y4W2 734 aaKnown RBP15.01□□□□□ -0.01
TMEM258-208ENST00000545210 CHL1O00533 1208 aa15□□□□□ -0.01
TMEM258-208ENST00000545210 IRS4O14654 1257 aaPredicted RBP15□□□□□ -0.01
TMEM258-208ENST00000545210 UFL1O94874 794 aa15□□□□□ -0.01
TMEM258-208ENST00000545210 NEUROD2Q15784 382 aa15□□□□□ -0.01
TMEM258-208ENST00000545210 PRPF38BQ5VTL8 546 aaKnown RBP15□□□□□ -0.01
TMEM258-208ENST00000545210 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
TMEM258-208ENST00000545210 PODXL2Q9NZ53 605 aa15□□□□□ -0.01
TMEM258-208ENST00000545210 ANKIB1Q9P2G1 1089 aa15□□□□□ -0.01
TMEM258-208ENST00000545210 HPS5Q9UPZ3 1129 aa15□□□□□ -0.01
TMEM258-208ENST00000545210 MYH3P11055 1940 aa15□□□□□ -0.01
TMEM258-208ENST00000545210 ZNF280AP59817 542 aaPredicted RBP14.99□□□□□ -0.01
TMEM258-208ENST00000545210 MOB2Q70IA6 237 aa14.99□□□□□ -0.01
TMEM258-208ENST00000545210 SEC31BQ9NQW1 1179 aa14.99□□□□□ -0.01
TMEM258-208ENST00000545210 DBF4Q9UBU7 674 aaPredicted RBP14.99□□□□□ -0.01
TMEM258-208ENST00000545210 SCAF8Q9UPN6 1271 aaKnown RBP14.99□□□□□ -0.01
TMEM258-208ENST00000545210 ZNF609O15014 1411 aa14.99□□□□□ -0.01
TMEM258-208ENST00000545210 TBC1D8O95759 1140 aa14.98□□□□□ -0.01
TMEM258-208ENST00000545210 FKBP1BP68106 108 aa14.98□□□□□ -0.01
TMEM258-208ENST00000545210 RSBN1LQ6PCB5 846 aaPredicted RBP14.98□□□□□ -0.01
TMEM258-208ENST00000545210 AGBL3Q8NEM8 1001 aa14.98□□□□□ -0.01
TMEM258-208ENST00000545210 GGA1Q9UJY5 639 aa14.98□□□□□ -0.01
TMEM258-208ENST00000545210 HDAC9Q9UKV0 1011 aa14.98□□□□□ -0.01
TMEM258-208ENST00000545210 USP17L8P0C7I0 530 aa14.97□□□□□ -0.01
TMEM258-208ENST00000545210 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
TMEM258-208ENST00000545210 ZNF296Q8WUU4 475 aaPredicted RBP14.97□□□□□ -0.01
TMEM258-208ENST00000545210 MYOZ2Q9NPC6 264 aa14.97□□□□□ -0.01
TMEM258-208ENST00000545210 UBE2Q2LH0YL09 131 aa14.96□□□□□ -0.01
TMEM258-208ENST00000545210 TRIM28Q13263 835 aaKnown RBP14.96□□□□□ -0.01
TMEM258-208ENST00000545210 PKN2Q16513 984 aaKnown RBP14.96□□□□□ -0.01
TMEM258-208ENST00000545210 PRAMEF18Q5VWM3 479 aa14.96□□□□□ -0.01
TMEM258-208ENST00000545210 ZBTB38Q8NAP3 1195 aaPredicted RBP14.96□□□□□ -0.01
TMEM258-208ENST00000545210 GMLQ99445 158 aa14.96□□□□□ -0.01
TMEM258-208ENST00000545210 HYPKQ9NX55 129 aa14.96□□□□□ -0.01
TMEM258-208ENST00000545210 PITPNM2Q9BZ72 1349 aa14.95□□□□□ -0.02
TMEM258-208ENST00000545210 HOXB7P09629 217 aa14.95□□□□□ -0.02
TMEM258-208ENST00000545210 CCDC85AQ96PX6 553 aaPredicted RBP14.95□□□□□ -0.02
TMEM258-208ENST00000545210 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
TMEM258-208ENST00000545210 CENPFP49454 3210 aa14.94□□□□□ -0.02
TMEM258-208ENST00000545210 USP17L3A6NCW0 530 aa14.94□□□□□ -0.02
TMEM258-208ENST00000545210 USP17L4A6NCW7 530 aa14.94□□□□□ -0.02
TMEM258-208ENST00000545210 TTLL12Q14166 644 aaPredicted RBP14.94□□□□□ -0.02
TMEM258-208ENST00000545210 USP17L1Q7RTZ2 530 aa14.94□□□□□ -0.02
TMEM258-208ENST00000545210 RIC3Q7Z5B4 369 aa14.94□□□□□ -0.02
TMEM258-208ENST00000545210 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
TMEM258-208ENST00000545210 NBPF9Q3BBW0 867 aa14.93□□□□□ -0.02
TMEM258-208ENST00000545210 CCDC152Q4G0S7 254 aa14.93□□□□□ -0.02
TMEM258-208ENST00000545210 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
TMEM258-208ENST00000545210 JARID2Q92833 1246 aaPredicted RBP14.93□□□□□ -0.02
TMEM258-208ENST00000545210 LAMB1P07942 1786 aa14.93□□□□□ -0.02
TMEM258-208ENST00000545210 XDHP47989 1333 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 HTTP42858 3142 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 ECM29Q5VYK3 1845 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 MKI67P46013 3256 aaKnown RBP14.92□□□□□ -0.02
TMEM258-208ENST00000545210 WTIPA6NIX2 430 aaPredicted RBP14.92□□□□□ -0.02
TMEM258-208ENST00000545210 GPR25O00155 361 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 HSP90B1P14625 803 aaKnown RBP14.92□□□□□ -0.02
TMEM258-208ENST00000545210 TM4SF4P48230 202 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 PODNQ7Z5L7 613 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 MYD88Q99836 296 aa14.92□□□□□ -0.02
TMEM258-208ENST00000545210 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
TMEM258-208ENST00000545210 PDE8AO60658 829 aa14.91□□□□□ -0.02
TMEM258-208ENST00000545210 PCCAP05165 728 aaPredicted RBP14.91□□□□□ -0.02
TMEM258-208ENST00000545210 ANKRD18AQ8IVF6 992 aa14.91□□□□□ -0.02
TMEM258-208ENST00000545210 MXD3Q9BW11 206 aa14.91□□□□□ -0.02
TMEM258-208ENST00000545210 RBBP6Q7Z6E9 1792 aaKnown RBP14.9□□□□□ -0.02
TMEM258-208ENST00000545210 ATP2B4P23634 1241 aa14.9□□□□□ -0.02
TMEM258-208ENST00000545210 FBXO46Q6PJ61 603 aaPredicted RBP14.9□□□□□ -0.02
TMEM258-208ENST00000545210 CCDC191Q8NCU4 936 aa14.9□□□□□ -0.02
TMEM258-208ENST00000545210 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
TMEM258-208ENST00000545210 MBIPQ9NS73 344 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms