RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	ALAS2	P22557	587 aa		9.33	□□□□□ -0.92
LEMD3-205	ENST00000544506	INSM1	Q01101	510 aa	Predicted RBP	9.33	□□□□□ -0.92
LEMD3-205	ENST00000544506	HYAL2	Q12891	473 aa		9.33	□□□□□ -0.92
LEMD3-205	ENST00000544506	ZFYVE28	Q9HCC9	887 aa		9.33	□□□□□ -0.92
LEMD3-205	ENST00000544506	LOC102724428	A0A0B4J2F2	783 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506		J3QW42	95 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	KIF4A	O95239	1232 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	CPB1	P15086	417 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	SIK1	P57059	783 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	FMR1	Q06787	632 aa	Known RBP eCLIP	9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	USPL1	Q5W0Q7	1092 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	CHSY3	Q70JA7	882 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	FAM35A	Q86V20	835 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	PMEPA1	Q969W9	287 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	CSRNP1	Q96S65	589 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	AMOTL2	Q9Y2J4	779 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	STARD13	Q9Y3M8	1113 aa		9.32	□□□□□ -0.92
LEMD3-205	ENST00000544506	EIF1AY	O14602	144 aa	Known RBP	9.31	□□□□□ -0.92
LEMD3-205	ENST00000544506	CPNE3	O75131	537 aa	Known RBP	9.31	□□□□□ -0.92
LEMD3-205	ENST00000544506	ARHGEF15	O94989	841 aa		9.31	□□□□□ -0.92
LEMD3-205	ENST00000544506	PLCB3	Q01970	1234 aa		9.31	□□□□□ -0.92
LEMD3-205	ENST00000544506	NPAS4	Q8IUM7	802 aa		9.31	□□□□□ -0.92
LEMD3-205	ENST00000544506	BTBD6	Q96KE9	485 aa		9.31	□□□□□ -0.92
LEMD3-205	ENST00000544506	SALL4	Q9UJQ4	1053 aa		9.31	□□□□□ -0.92
LEMD3-205	ENST00000544506	POLR3D	P05423	398 aa	Predicted RBP	9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	P4HB	P07237	508 aa	Known RBP	9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	EIF2AK2	P19525	551 aa	Known RBP	9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	AMPD1	P23109	780 aa		9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	MAPK8	P45983	427 aa		9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	PERM1	Q5SV97	790 aa		9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	NCAPG2	Q86XI2	1143 aa		9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	NEDD1	Q8NHV4	660 aa		9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	DNAJC25	Q9H1X3	360 aa		9.3	□□□□□ -0.92
LEMD3-205	ENST00000544506	PNMA6F	A0A0J9YX94	578 aa		9.29	□□□□□ -0.92
LEMD3-205	ENST00000544506	GHRH	P01286	108 aa		9.29	□□□□□ -0.92
LEMD3-205	ENST00000544506	ALB	P02768	609 aa		9.29	□□□□□ -0.92
LEMD3-205	ENST00000544506	PSAPL1	Q6NUJ1	521 aa		9.29	□□□□□ -0.92
LEMD3-205	ENST00000544506	LPIN3	Q9BQK8	851 aa		9.29	□□□□□ -0.92
LEMD3-205	ENST00000544506	ENAM	Q9NRM1	1142 aa		9.29	□□□□□ -0.92
LEMD3-205	ENST00000544506	ACPP	P15309	386 aa		9.28	□□□□□ -0.92
LEMD3-205	ENST00000544506	ENOX2	Q16206	610 aa	Known RBP	9.28	□□□□□ -0.92
LEMD3-205	ENST00000544506	KANK3	Q6NY19	840 aa		9.28	□□□□□ -0.92
LEMD3-205	ENST00000544506	SPACA7	Q96KW9	195 aa		9.28	□□□□□ -0.92
LEMD3-205	ENST00000544506	PODXL2	Q9NZ53	605 aa		9.28	□□□□□ -0.92
LEMD3-205	ENST00000544506	FRRS1L	Q9P0K9	344 aa		9.28	□□□□□ -0.92
LEMD3-205	ENST00000544506	EDN3	P14138	238 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	HOXB4	P17483	251 aa	Predicted RBP	9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	ERCC3	P19447	782 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	ATP11A	P98196	1134 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	ELMSAN1	Q6PJG2	1045 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	C20orf204	Q6ZNR8	217 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	GALNT12	Q8IXK2	581 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	CEP120	Q8N960	986 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	NUDT8	Q8WV74	236 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	SMG9	Q9H0W8	520 aa	Known RBP	9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	RBSN	Q9H1K0	784 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506	LATS2	Q9NRM7	1088 aa		9.27	□□□□□ -0.93
LEMD3-205	ENST00000544506		M0R082	166 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	DGKG	P49619	791 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	COL19A1	Q14993	1142 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	C8orf86	Q6ZUL3	223 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	MICALL1	Q8N3F8	863 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	ZNF417	Q8TAU3	575 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	CCDC74A	Q96AQ1	378 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	PLD4	Q96BZ4	506 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	SETDB2	Q96T68	719 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	RASSF4	Q9H2L5	321 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	JPH1	Q9HDC5	661 aa	Predicted RBP	9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	NPHS2	Q9NP85	383 aa		9.26	□□□□□ -0.93
LEMD3-205	ENST00000544506	PEAR1	Q5VY43	1037 aa	Predicted RBP	9.25	□□□□□ -0.93
LEMD3-205	ENST00000544506	RRAGC	Q9HB90	399 aa		9.25	□□□□□ -0.93
LEMD3-205	ENST00000544506	WWC3	Q9ULE0	1092 aa		9.25	□□□□□ -0.93
LEMD3-205	ENST00000544506	RGS9	O75916	674 aa	Predicted RBP	9.24	□□□□□ -0.93
LEMD3-205	ENST00000544506	IRS1	P35568	1242 aa		9.24	□□□□□ -0.93
LEMD3-205	ENST00000544506	EAPP	Q56P03	285 aa	Predicted RBP	9.24	□□□□□ -0.93
LEMD3-205	ENST00000544506	ZKSCAN3	Q9BRR0	538 aa		9.24	□□□□□ -0.93
LEMD3-205	ENST00000544506	CCDC9	Q9Y3X0	531 aa	Known RBP	9.24	□□□□□ -0.93
LEMD3-205	ENST00000544506	TRPA1	O75762	1119 aa		9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506	SNRPN	P63162	240 aa	Known RBP	9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506	ATP2B2	Q01814	1243 aa		9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506	HHIP	Q96QV1	700 aa		9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506	OSMR	Q99650	979 aa		9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506	PBX4	Q9BYU1	374 aa		9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506	DZANK1	Q9NVP4	752 aa		9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506	ADAMTS8	Q9UP79	889 aa		9.23	□□□□□ -0.93
LEMD3-205	ENST00000544506		A0A1W2PP55	124 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	NFKBIE	O00221	500 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	LILRB5	O75023	590 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	LDHB	P07195	334 aa	Known RBP	9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	AFF1	P51825	1210 aa	Known RBP	9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	GRIK5	Q16478	980 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	CEP135	Q66GS9	1140 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	PI16	Q6UXB8	463 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	FBXO33	Q7Z6M2	555 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	EPS8L3	Q8TE67	593 aa	Known RBP	9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	TTC9	Q92623	222 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	TRIM33	Q9UPN9	1127 aa		9.22	□□□□□ -0.93
LEMD3-205	ENST00000544506	SMNDC1	O75940	238 aa	Known RBP eCLIP	9.21	□□□□□ -0.94
LEMD3-205	ENST00000544506	ALG1L	Q6GMV1	187 aa		9.21	□□□□□ -0.94

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