RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CDC37Q16543 378 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 UVSSAQ2YD98 709 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 HSP90B2PQ58FF3 399 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 HELQQ8TDG4 1101 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 ZNF526Q8TF50 670 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 CNKSR1Q969H4 720 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 ITPKCQ96DU7 683 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 CEP89Q96ST8 783 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 KLF16Q9BXK1 252 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 TUT1Q9H6E5 874 aaKnown RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 RAB6BQ9NRW1 208 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 SEPT3Q9UH03 358 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 HRH3Q9Y5N1 445 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 CFAP43Q8NDM7 1665 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 DHX29Q7Z478 1369 aaKnown RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 EFCAB5A4FU69 1503 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 ZMYM4Q5VZL5 1548 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 A0A1B0GUL7 405 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 CTIFO43310 598 aaKnown RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 TPM3P06753 285 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 RRP1P56182 461 aaKnown RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 WDR4P57081 412 aaKnown RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 PRR20EP86478 221 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 PRR20CP86479 221 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 PRR20DP86480 221 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 PRR20BP86481 221 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 PRR20AP86496 221 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 ZNF211Q13398 564 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 MYBPC2Q14324 1141 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 ZRSR2Q15696 482 aaKnown RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 ATP2B3Q16720 1220 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 FOXD4L5Q5VV16 416 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 KRT222Q8N1A0 295 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 TXLNBQ8N3L3 684 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 SDR16C5Q8N3Y7 309 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 CHMP7Q8WUX9 453 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 FOXD4L4Q8WXT5 416 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 SGSM3Q96HU1 749 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 NLRP3Q96P20 1036 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 PURBQ96QR8 312 aaKnown RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 C2orf49Q9BVC5 232 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 TMX4Q9H1E5 349 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 CXorf56Q9H5V9 222 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 TOR4AQ9NXH8 423 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 RSPH14Q9UHP6 348 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 DDX41Q9UJV9 622 aaKnown RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 DNMT3AQ9Y6K1 912 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 V9GYY5 206 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 CNTLNQ9NXG0 1405 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 YEATS2Q9ULM3 1422 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 CEP170Q5SW79 1584 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 SNAPC4Q5SXM2 1469 aa5.19□□□□□ -1.58
SNHG1-219ENST00000542112 MAGI1Q96QZ7 1491 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-219ENST00000542112 IQGAP2Q13576 1575 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 H0YHG0 523 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 J3QL48 77 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 CCP110O43303 1012 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 FAM13AO94988 1023 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 TIMP2P16035 220 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 NPR3P17342 541 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 USP8P40818 1118 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 CD151P48509 253 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 HIRAP54198 1017 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-219ENST00000542112 ZNF445P59923 1031 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 CBLBQ13191 982 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 NAA30Q147X3 362 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-219ENST00000542112 TEAD4Q15561 434 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 JAKMIP3Q5VZ66 844 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 CAVIN1Q6NZI2 390 aaKnown RBP5.18□□□□□ -1.58
SNHG1-219ENST00000542112 C16orf46Q6P387 395 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 POTEAQ6S8J7 498 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 KDF1Q8NAX2 398 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-219ENST00000542112 SUFUQ9UMX1 484 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 IQSEC3Q9UPP2 1182 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-219ENST00000542112 JRKLQ9Y4A0 524 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 UGGT2Q9NYU1 1516 aa5.18□□□□□ -1.58
SNHG1-219ENST00000542112 ROCK2O75116 1388 aaKnown RBP5.17□□□□□ -1.58
SNHG1-219ENST00000542112 CCDC189A1A4V9 331 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 SERTM1A2A2V5 107 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 ANKRD18BA2A2Z9 1011 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 TNFRSF10AO00220 468 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 MEN1O00255 615 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 ZRANB2O95218 330 aaKnown RBP eCLIP5.17□□□□□ -1.582e-9■■■■■ 30
SNHG1-219ENST00000542112 SMPD1P17405 629 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 ATP2B1P20020 1258 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 CYP2C19P33261 490 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 GPC1P35052 558 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 CENPCQ03188 943 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 GPS2Q13227 327 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 C8orf34Q49A92 452 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 ZC3H12AQ5D1E8 599 aaKnown RBP5.17□□□□□ -1.58
SNHG1-219ENST00000542112 TEX35Q5T0J7 233 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 DNAJC14Q6Y2X3 702 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-219ENST00000542112 CLEC17AQ6ZS10 378 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 CAPN12Q6ZSI9 719 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 STAG1Q8WVM7 1258 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 FHDC1Q9C0D6 1143 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-219ENST00000542112 ZFAND3Q9H8U3 227 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 ANO2Q9NQ90 1003 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 VIRMAQ69YN4 1812 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms