RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CNNM3Q8NE01 707 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 NCOA7Q8NI08 942 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 TULP4Q9NRJ4 1543 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 OFD1O75665 1012 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 IPO7O95373 1038 aaKnown RBP18.73■□□□□ 0.59
VARS2-212ENST00000542001 MCM5P33992 734 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 AATKQ6ZMQ8 1374 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 DHX32Q7L7V1 743 aaKnown RBP18.73■□□□□ 0.59
VARS2-212ENST00000542001 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 ALG1Q9BT22 464 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 USP6P35125 1406 aa18.73■□□□□ 0.59
VARS2-212ENST00000542001 LRRC24Q50LG9 513 aa18.72■□□□□ 0.59
VARS2-212ENST00000542001 GNL3LQ9NVN8 582 aaKnown RBP18.72■□□□□ 0.59
VARS2-212ENST00000542001 CDKL5O76039 1030 aa18.72■□□□□ 0.59
VARS2-212ENST00000542001 CHGBP05060 677 aa18.72■□□□□ 0.59
VARS2-212ENST00000542001 SPECC1Q5M775 1068 aa18.72■□□□□ 0.59
VARS2-212ENST00000542001 DNAJC10Q8IXB1 793 aa18.72■□□□□ 0.59
VARS2-212ENST00000542001 ARHGEF10O15013 1369 aa18.72■□□□□ 0.59
VARS2-212ENST00000542001 URI1O94763 535 aaPredicted RBP18.71■□□□□ 0.59
VARS2-212ENST00000542001 LSG1Q9H089 658 aaKnown RBP18.71■□□□□ 0.59
VARS2-212ENST00000542001 ZHX1Q9UKY1 873 aaPredicted RBP18.71■□□□□ 0.59
VARS2-212ENST00000542001 TAF5LO75529 589 aa18.71■□□□□ 0.59
VARS2-212ENST00000542001 NOC3LQ8WTT2 800 aaKnown RBP18.71■□□□□ 0.59
VARS2-212ENST00000542001 FTOQ9C0B1 505 aaKnown RBP eCLIP18.71■□□□□ 0.59
VARS2-212ENST00000542001 GLI2P10070 1586 aa18.71■□□□□ 0.59
VARS2-212ENST00000542001 PPP4R3BQ5MIZ7 849 aa18.71■□□□□ 0.59
VARS2-212ENST00000542001 PUS3Q9BZE2 481 aaKnown RBP18.71■□□□□ 0.59
VARS2-212ENST00000542001 NPHP3Q7Z494 1330 aa18.71■□□□□ 0.59
VARS2-212ENST00000542001 IKQ13123 557 aaPredicted RBP18.7■□□□□ 0.58
VARS2-212ENST00000542001 TTC6Q86TZ1 520 aa18.7■□□□□ 0.58
VARS2-212ENST00000542001 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
VARS2-212ENST00000542001 MTMR6Q9Y217 621 aa18.7■□□□□ 0.58
VARS2-212ENST00000542001 AXIN2Q9Y2T1 843 aa18.7■□□□□ 0.58
VARS2-212ENST00000542001 SKILP12757 684 aa18.7■□□□□ 0.58
VARS2-212ENST00000542001 IL25Q9H293 177 aa18.7■□□□□ 0.58
VARS2-212ENST00000542001 ZHX3Q9H4I2 956 aa18.7■□□□□ 0.58
VARS2-212ENST00000542001 DBNLQ9UJU6 430 aaKnown RBP18.7■□□□□ 0.58
VARS2-212ENST00000542001 ERICH4A6NGS2 130 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
VARS2-212ENST00000542001 SSBP05455 408 aaKnown RBP eCLIP18.69■□□□□ 0.58
VARS2-212ENST00000542001 AFMP43652 599 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 hCG_1642624A0A1W2PR95 340 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 B4E1Z4 1266 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 NOL7Q9UMY1 257 aaKnown RBP18.69■□□□□ 0.58
VARS2-212ENST00000542001 STX1AQ16623 288 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 PI16Q6UXB8 463 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 ZDHHC9Q9Y397 364 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 LRRC7Q96NW7 1537 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 MEX3CQ5U5Q3 659 aaKnown RBP18.69■□□□□ 0.58
VARS2-212ENST00000542001 PHKBQ93100 1093 aa18.69■□□□□ 0.58
VARS2-212ENST00000542001 EYA2O00167 538 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
VARS2-212ENST00000542001 EPHA10Q5JZY3 1008 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 LEO1Q8WVC0 666 aaPredicted RBP18.68■□□□□ 0.58
VARS2-212ENST00000542001 LRMPQ12912 555 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 ZBTB43O43298 467 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 SASH1O94885 1247 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 SLC5A1P13866 664 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 IL2RBP14784 551 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 ZAP70P43403 619 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 USP5P45974 858 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 PPFIBP1Q86W92 1011 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 VAT1LQ9HCJ6 419 aa18.68■□□□□ 0.58
VARS2-212ENST00000542001 PRDM1O75626 825 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
VARS2-212ENST00000542001 UVSSAQ2YD98 709 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 ZSCAN16Q9H4T2 348 aaPredicted RBP18.67■□□□□ 0.58
VARS2-212ENST00000542001 CEP152O94986 1710 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 SYKP43405 635 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 MFSD6Q6ZSS7 791 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 SSRP1Q08945 709 aaKnown RBP18.67■□□□□ 0.58
VARS2-212ENST00000542001 MRPS27Q92552 414 aaKnown RBP18.67■□□□□ 0.58
VARS2-212ENST00000542001 XAGE2Q96GT9 111 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 PDCL3Q9H2J4 239 aa18.67■□□□□ 0.58
VARS2-212ENST00000542001 PNPLA6Q8IY17 1366 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 NR1I2O75469 434 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 CMTR1Q8N1G2 835 aaKnown RBP18.66■□□□□ 0.58
VARS2-212ENST00000542001 MAGEB6Q8N7X4 407 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 STAP2Q9UGK3 403 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 SHROOM2Q13796 1616 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 GOLGA6L1Q8N7Z2 621 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 PI4K2BQ8TCG2 481 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 SLC4A4Q9Y6R1 1079 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 HECW2Q9P2P5 1572 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 TOP1P11387 765 aaKnown RBP18.66■□□□□ 0.58
VARS2-212ENST00000542001 KBTBD3Q8NAB2 608 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
VARS2-212ENST00000542001 SPTLC2O15270 562 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 CYP7A1P22680 504 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 TNNT3P45378 269 aaPredicted RBP18.65■□□□□ 0.58
VARS2-212ENST00000542001 FILIP1LQ4L180 1135 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 ATP7BP35670 1465 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 STX17P56962 302 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 PLBD2Q8NHP8 589 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 CBX8Q9HC52 389 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 GPHNQ9NQX3 736 aaPredicted RBP18.65■□□□□ 0.58
VARS2-212ENST00000542001 PTPN21Q16825 1174 aa18.65■□□□□ 0.58
VARS2-212ENST00000542001 MTERF4Q7Z6M4 381 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms