RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 UTYO14607 1347 aa20.23■□□□□ 0.83
EPB41L3-204ENST00000540638 CLEC17AQ6ZS10 378 aa20.23■□□□□ 0.83
EPB41L3-204ENST00000540638 SPATA32Q96LK8 384 aa20.23■□□□□ 0.83
EPB41L3-204ENST00000540638 MARF1Q9Y4F3 1742 aaKnown RBP20.23■□□□□ 0.83
EPB41L3-204ENST00000540638 USP42Q9H9J4 1324 aaKnown RBP20.23■□□□□ 0.83
EPB41L3-204ENST00000540638 ZNF830Q96NB3 372 aaPredicted RBP20.23■□□□□ 0.83
EPB41L3-204ENST00000540638 HAUS7Q99871 368 aa20.23■□□□□ 0.83
EPB41L3-204ENST00000540638 ZAP70P43403 619 aa20.22■□□□□ 0.83
EPB41L3-204ENST00000540638 LRP10Q7Z4F1 713 aa20.22■□□□□ 0.83
EPB41L3-204ENST00000540638 PDCP20941 246 aa20.22■□□□□ 0.83
EPB41L3-204ENST00000540638 ITGA6P23229 1130 aa20.22■□□□□ 0.83
EPB41L3-204ENST00000540638 KRT32Q14532 448 aa20.22■□□□□ 0.83
EPB41L3-204ENST00000540638 ATG9AQ7Z3C6 839 aa20.22■□□□□ 0.83
EPB41L3-204ENST00000540638 LRRC37A3O60309 1634 aa20.22■□□□□ 0.83
EPB41L3-204ENST00000540638 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 CSPP1Q1MSJ5 1256 aa20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 ARID3AQ99856 593 aa20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 GREM2Q9H772 168 aa20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 ATP2B3Q16720 1220 aa20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 SPC24Q8NBT2 197 aa20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 SLIT3O75094 1523 aa20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
EPB41L3-204ENST00000540638 DNAJC5Q9H3Z4 198 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 RPAP1Q9BWH6 1393 aaPredicted RBP20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 CPLX1O14810 134 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 UBE2HP62256 183 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 CCDC144CPQ8IYA2 1237 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 ATG3Q9NT62 314 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 CACNA1FO60840 1977 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 SCARF1Q14162 830 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 RABL6Q3YEC7 729 aaPredicted RBP20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 DRC7Q8IY82 874 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 HMG20BQ9P0W2 317 aa20.2■□□□□ 0.82
EPB41L3-204ENST00000540638 RXRAP19793 462 aa20.19■□□□□ 0.82
EPB41L3-204ENST00000540638 CCDC183Q5T5S1 534 aa20.19■□□□□ 0.82
EPB41L3-204ENST00000540638 MPHOSPH8Q99549 860 aa20.19■□□□□ 0.82
EPB41L3-204ENST00000540638 TM6SF1Q9BZW5 370 aa20.19■□□□□ 0.82
EPB41L3-204ENST00000540638 ANKRD18BA2A2Z9 1011 aa20.19■□□□□ 0.82
EPB41L3-204ENST00000540638 TOB2Q14106 344 aaPredicted RBP20.19■□□□□ 0.82
EPB41L3-204ENST00000540638 OTUD7BQ6GQQ9 843 aa20.19■□□□□ 0.82
EPB41L3-204ENST00000540638 SMIM5Q71RC9 77 aa20.18■□□□□ 0.82
EPB41L3-204ENST00000540638 RNF113AO15541 343 aaKnown RBP20.18■□□□□ 0.82
EPB41L3-204ENST00000540638 ATP6V1AP38606 617 aa20.18■□□□□ 0.82
EPB41L3-204ENST00000540638 AKAP2Q9Y2D5 859 aa20.18■□□□□ 0.82
EPB41L3-204ENST00000540638 ST3GAL1Q11201 340 aa20.17■□□□□ 0.82
EPB41L3-204ENST00000540638 SLC9C2Q5TAH2 1124 aa20.17■□□□□ 0.82
EPB41L3-204ENST00000540638 HSPD1P10809 573 aaKnown RBP20.17■□□□□ 0.82
EPB41L3-204ENST00000540638 CHMP4CQ96CF2 233 aa20.17■□□□□ 0.82
EPB41L3-204ENST00000540638 GNL2Q13823 731 aaKnown RBP20.17■□□□□ 0.82
EPB41L3-204ENST00000540638 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
EPB41L3-204ENST00000540638 OSBP2Q969R2 916 aa20.17■□□□□ 0.82
EPB41L3-204ENST00000540638 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 ZNF609O15014 1411 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 M0R2C6 588 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 CASP7P55210 303 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 SF3A1Q15459 793 aaKnown RBP20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 ZSCAN30Q86W11 494 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 CCDC82Q8N4S0 544 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 EPB41L2O43491 1005 aaKnown RBP20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 TRDNQ13061 729 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 TTC6Q86TZ1 520 aa20.16■□□□□ 0.82
EPB41L3-204ENST00000540638 STOX1Q6ZVD7 989 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 FTOQ9C0B1 505 aaKnown RBP eCLIP20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 DACT1Q9NYF0 836 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 CAMTA1Q9Y6Y1 1673 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 IMMTQ16891 758 aaKnown RBP20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 TNMDQ9H2S6 317 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 ABCF2Q9UG63 623 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 R3HCC1Q9Y3T6 440 aaKnown RBP20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 MAST3O60307 1309 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 SOS2Q07890 1332 aaPredicted RBP20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 OVOS2A0A0G2JMS6 1433 aa20.15■□□□□ 0.82
EPB41L3-204ENST00000540638 DDB1Q16531 1140 aa20.14■□□□□ 0.82
EPB41L3-204ENST00000540638 LIG1P18858 919 aa20.14■□□□□ 0.81
EPB41L3-204ENST00000540638 CLCN1P35523 988 aa20.14■□□□□ 0.81
EPB41L3-204ENST00000540638 DHX32Q7L7V1 743 aaKnown RBP20.14■□□□□ 0.81
EPB41L3-204ENST00000540638 TEX13AQ9BXU3 409 aaPredicted RBP20.14■□□□□ 0.81
EPB41L3-204ENST00000540638 NUP62CLQ9H1M0 184 aa20.14■□□□□ 0.81
EPB41L3-204ENST00000540638 E7EWF7 191 aa20.14■□□□□ 0.81
EPB41L3-204ENST00000540638 LRRFIP1Q32MZ4 808 aaKnown RBP20.14■□□□□ 0.81
EPB41L3-204ENST00000540638 PTPDC1A2A3K4 754 aa20.13■□□□□ 0.81
EPB41L3-204ENST00000540638 SCRN1Q12765 414 aa20.13■□□□□ 0.81
EPB41L3-204ENST00000540638 ZNF213O14771 459 aa20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 ME1P48163 572 aa20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 FAM182BQ5T319 152 aa20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 ZBTB38Q8NAP3 1195 aaPredicted RBP20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 BCL11BQ9C0K0 894 aaPredicted RBP20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 GOLGA8BA8MQT2 603 aa20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 GIGYF2Q6Y7W6 1299 aaKnown RBP20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 COL15A1P39059 1388 aa20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 NLRP10Q86W26 655 aa20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 ERCC4Q92889 916 aaPredicted RBP20.12■□□□□ 0.81
EPB41L3-204ENST00000540638 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
EPB41L3-204ENST00000540638 KLF18A0A0U1RQI7 1052 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms