RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ATP2B4P23634 1241 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 FKBP1BP68106 108 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 SLC9C1Q4G0N8 1177 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 TBC1D8O95759 1140 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 FMR1Q06787 632 aaKnown RBP eCLIP9.6□□□□□ -0.87
GNE-205ENST00000539815 APOBEC3FQ8IUX4 373 aaKnown RBP9.6□□□□□ -0.87
GNE-205ENST00000539815 HTATIP2Q9BUP3 242 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 MYH16Q9H6N6 1097 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 HYPKQ9NX55 129 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 RGPD5Q99666 1765 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 USP17L3A6NCW0 530 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 USP17L4A6NCW7 530 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 ADM5C9JUS6 153 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 USP17L1Q7RTZ2 530 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 SBF2Q86WG5 1849 aa9.6□□□□□ -0.87
GNE-205ENST00000539815 FBXO46Q6PJ61 603 aaPredicted RBP9.59□□□□□ -0.87
GNE-205ENST00000539815 KIAA0825Q8IV33 1275 aa9.59□□□□□ -0.87
GNE-205ENST00000539815 ZSCAN29Q8IWY8 852 aaPredicted RBP9.59□□□□□ -0.87
GNE-205ENST00000539815 SLC17A8Q8NDX2 589 aa9.59□□□□□ -0.87
GNE-205ENST00000539815 MYD88Q99836 296 aa9.59□□□□□ -0.87
GNE-205ENST00000539815 KDRP35968 1356 aa9.59□□□□□ -0.87
GNE-205ENST00000539815 MANSC4A6NHS7 340 aaPredicted RBP9.59□□□□□ -0.87
GNE-205ENST00000539815 FMNL1O95466 1100 aaPredicted RBP9.59□□□□□ -0.87
GNE-205ENST00000539815 INHBEP58166 350 aa9.59□□□□□ -0.87
GNE-205ENST00000539815 TAF1CQ15572 869 aaPredicted RBP9.59□□□□□ -0.87
GNE-205ENST00000539815 SCARF1Q14162 830 aa9.59□□□□□ -0.87
GNE-205ENST00000539815 CWC25Q9NXE8 425 aaPredicted RBP9.59□□□□□ -0.87
GNE-205ENST00000539815 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
GNE-205ENST00000539815 CDCA5Q96FF9 252 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 NCAPD2Q15021 1401 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 UBXN2AP68543 259 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 TTLL5Q6EMB2 1281 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 RAET1EQ8TD07 263 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 ZFYVE28Q9HCC9 887 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 RNF186Q9NXI6 227 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 C9orf78Q9NZ63 289 aaPredicted RBP9.58□□□□□ -0.88
GNE-205ENST00000539815 GPR25O00155 361 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 CHAF1AQ13111 956 aaPredicted RBP9.58□□□□□ -0.88
GNE-205ENST00000539815 CCDC30Q5VVM6 783 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 ANKRD2Q9GZV1 360 aa9.58□□□□□ -0.88
GNE-205ENST00000539815 PEAK1Q9H792 1746 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 TRPM4Q8TD43 1214 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 HHIPL1Q96JK4 782 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 PHACTR3Q96KR7 559 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 MYO3BQ8WXR4 1341 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 LTN1O94822 1766 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 RGL2O15211 777 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 SCNN1DP51172 638 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 ZNF804AQ7Z570 1209 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 NOL10Q9BSC4 688 aaKnown RBP9.57□□□□□ -0.88
GNE-205ENST00000539815 HOXA10P31260 410 aaPredicted RBP9.57□□□□□ -0.88
GNE-205ENST00000539815 CCDC57Q2TAC2 916 aa9.57□□□□□ -0.88
GNE-205ENST00000539815 FAM208AQ9UK61 1670 aaKnown RBP9.56□□□□□ -0.88
GNE-205ENST00000539815 POTECB2RU33 542 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 FKBP5Q13451 457 aaPredicted RBP9.56□□□□□ -0.88
GNE-205ENST00000539815 CCDC146Q8IYE0 955 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 ABCC4O15439 1325 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 KIF7Q2M1P5 1343 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 GTF2IP78347 998 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 AGBL3Q8NEM8 1001 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 SAGE1Q9NXZ1 904 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 FANCIQ9NVI1 1328 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 SHANK3Q9BYB0 1731 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 CEP290O15078 2479 aa9.56□□□□□ -0.88
GNE-205ENST00000539815 XDHP47989 1333 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 GNAI1P63096 354 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 GORABQ5T7V8 394 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 MYCNP04198 464 aaPredicted RBP9.55□□□□□ -0.88
GNE-205ENST00000539815 PRAMEF18Q5VWM3 479 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 HPS5Q9UPZ3 1129 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 TRIOBPQ9H2D6 2365 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 ANKRD18BA2A2Z9 1011 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 PPP2R1AP30153 589 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 PLBD2Q8NHP8 589 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 PRKAG2Q9UGJ0 569 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 COL18A1P39060 1754 aa9.55□□□□□ -0.88
GNE-205ENST00000539815 PDE8AO60658 829 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 SLC34A2O95436 690 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 RSBN1LQ6PCB5 846 aaPredicted RBP9.54□□□□□ -0.88
GNE-205ENST00000539815 SLC4A10Q6U841 1118 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 SMCR8Q8TEV9 937 aaPredicted RBP9.54□□□□□ -0.88
GNE-205ENST00000539815 SASH1O94885 1247 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 SP3Q02447 781 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 IFIT5Q13325 482 aaKnown RBP9.54□□□□□ -0.88
GNE-205ENST00000539815 WDR78Q5VTH9 848 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 NLRP10Q86W26 655 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 DCAF15Q66K64 600 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
GNE-205ENST00000539815 MYOZ2Q9NPC6 264 aa9.54□□□□□ -0.88
GNE-205ENST00000539815 NBPF26B4DH59 902 aa9.53□□□□□ -0.88
GNE-205ENST00000539815 EIF4A1P60842 406 aaKnown RBP9.53□□□□□ -0.88
GNE-205ENST00000539815 CAVIN4Q5BKX8 364 aa9.53□□□□□ -0.88
GNE-205ENST00000539815 NBPF10Q6P3W6 841 aaKnown RBP9.53□□□□□ -0.88
GNE-205ENST00000539815 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
GNE-205ENST00000539815 ZNF296Q8WUU4 475 aaPredicted RBP9.53□□□□□ -0.88
GNE-205ENST00000539815 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
GNE-205ENST00000539815 HDAC5Q9UQL6 1122 aa9.53□□□□□ -0.88
GNE-205ENST00000539815 CST9Q5W186 159 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms