RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 RABL6Q3YEC7 729 aaPredicted RBP10.77□□□□□ -0.69
SF3B2-216ENST00000534765 LMBR1LQ6UX01 489 aa10.77□□□□□ -0.69
SF3B2-216ENST00000534765 PPP1R9BQ96SB3 815 aa10.77□□□□□ -0.69
SF3B2-216ENST00000534765 USP26Q9BXU7 913 aa10.77□□□□□ -0.69
SF3B2-216ENST00000534765 COL15A1P39059 1388 aa10.77□□□□□ -0.69
SF3B2-216ENST00000534765 DDX60Q8IY21 1712 aaKnown RBP10.77□□□□□ -0.69
SF3B2-216ENST00000534765 SPEF2Q9C093 1822 aa10.77□□□□□ -0.69
SF3B2-216ENST00000534765 CERKQ8TCT0 537 aa10.77□□□□□ -0.69
SF3B2-216ENST00000534765 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
SF3B2-216ENST00000534765 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
SF3B2-216ENST00000534765 FNBP4Q8N3X1 1017 aaPredicted RBP10.77□□□□□ -0.69
SF3B2-216ENST00000534765 LOC102724159A0A0B4J2E5 919 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 SNAP23O00161 211 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 TFCP2Q12800 502 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 PWP2Q15269 919 aaKnown RBP10.76□□□□□ -0.69
SF3B2-216ENST00000534765 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 RILPL2Q969X0 211 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 ISCA1Q9BUE6 129 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 GOLGA6L6A8MZA4 724 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 HMMRO75330 724 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 ZSCAN23Q3MJ62 389 aa10.76□□□□□ -0.69
SF3B2-216ENST00000534765 ZNF500O60304 480 aaPredicted RBP10.75□□□□□ -0.69
SF3B2-216ENST00000534765 CHMLP26374 656 aa10.75□□□□□ -0.69
SF3B2-216ENST00000534765 EP400NLQ6ZTU2 488 aa10.75□□□□□ -0.69
SF3B2-216ENST00000534765 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.75□□□□□ -0.69
SF3B2-216ENST00000534765 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
SF3B2-216ENST00000534765 V9GYY5 206 aaPredicted RBP10.75□□□□□ -0.69
SF3B2-216ENST00000534765 CDC45O75419 566 aa10.75□□□□□ -0.69
SF3B2-216ENST00000534765 NOLC1Q14978 699 aaKnown RBP eCLIP10.75□□□□□ -0.69
SF3B2-216ENST00000534765 C10orf67Q8IYJ2 551 aa10.75□□□□□ -0.69
SF3B2-216ENST00000534765 RSPH14Q9UHP6 348 aa10.75□□□□□ -0.69
SF3B2-216ENST00000534765 CRKLP46109 303 aaKnown RBP10.75□□□□□ -0.69
SF3B2-216ENST00000534765 BARGINQ6ZT62 677 aa10.75□□□□□ -0.69
SF3B2-216ENST00000534765 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
SF3B2-216ENST00000534765 JCADQ9P266 1359 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 DDX58O95786 925 aaKnown RBP10.74□□□□□ -0.69
SF3B2-216ENST00000534765 USP25Q9UHP3 1055 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 USP21Q9UK80 565 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 MYH3P11055 1940 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 TAF1LQ8IZX4 1826 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 LOC102724428A0A0B4J2F2 783 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 SIK1P57059 783 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 VPS72Q15906 364 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 PALLDQ8WX93 1383 aa10.74□□□□□ -0.69
SF3B2-216ENST00000534765 ATP6V1AP38606 617 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 TIMM10P62072 90 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 TCIRG1Q13488 830 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 AACSQ86V21 672 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 A0A0G2JLW4 131 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 KIF1BPQ96EK5 621 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 CHAMP1Q96JM3 812 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 PRIMPOLQ96LW4 560 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 BCORQ6W2J9 1755 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 NLRP10Q86W26 655 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 FAM227BQ96M60 508 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 DBNDD2Q9BQY9 259 aa10.73□□□□□ -0.69
SF3B2-216ENST00000534765 MAP3K15Q6ZN16 1313 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 BAG4O95429 457 aaKnown RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 RIOK3O14730 519 aaKnown RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 POLR3GO15318 223 aaPredicted RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 CPA1P15085 419 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 PTH1RQ03431 593 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 ZNF710Q8N1W2 664 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 LARP6Q9BRS8 491 aaKnown RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 ESYT1Q9BSJ8 1104 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 CWC25Q9NXE8 425 aaPredicted RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 THRAP3Q9Y2W1 955 aaKnown RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 CICQ96RK0 1608 aaPredicted RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 NEXNQ0ZGT2 675 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 SKIDA1Q1XH10 827 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 PI16Q6UXB8 463 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 GREM2Q9H772 168 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 AFF2P51816 1311 aa10.72□□□□□ -0.69
SF3B2-216ENST00000534765 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
SF3B2-216ENST00000534765 ADORA1P30542 326 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 KLHL40Q2TBA0 621 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 SUSD4Q5VX71 490 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 GIGYF2Q6Y7W6 1299 aaKnown RBP10.71□□□□□ -0.69
SF3B2-216ENST00000534765 LRRC4BQ9NT99 713 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 CLGNO14967 610 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 DDIT3P35638 169 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 SCARF1Q14162 830 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 SEC62Q99442 399 aaKnown RBP10.71□□□□□ -0.69
SF3B2-216ENST00000534765 COPRSQ9NQ92 184 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 CHMP3Q9Y3E7 222 aa10.71□□□□□ -0.69
SF3B2-216ENST00000534765 RIC1Q4ADV7 1423 aa10.71□□□□□ -0.7
SF3B2-216ENST00000534765 CAMTA2O94983 1202 aa10.71□□□□□ -0.7
SF3B2-216ENST00000534765 PKP1Q13835 747 aa10.71□□□□□ -0.7
SF3B2-216ENST00000534765 LY75O60449 1722 aa10.71□□□□□ -0.7
SF3B2-216ENST00000534765 C4AP0C0L4 1744 aa10.71□□□□□ -0.7
SF3B2-216ENST00000534765 C4BP0C0L5 1744 aa10.71□□□□□ -0.7
SF3B2-216ENST00000534765 LAMB2P55268 1798 aa10.71□□□□□ -0.7
SF3B2-216ENST00000534765 NHSQ6T4R5 1651 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 ZNF589Q86UQ0 364 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms