RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 RGS9O75916 674 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-211ENST00000534216 COL8A1P27658 744 aa7.49□□□□□ -1.21
ATPAF1-211ENST00000534216 SIK1P57059 783 aa7.49□□□□□ -1.21
ATPAF1-211ENST00000534216 GJD3Q8N144 294 aa7.49□□□□□ -1.21
ATPAF1-211ENST00000534216 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
ATPAF1-211ENST00000534216 FRRS1LQ9P0K9 344 aa7.49□□□□□ -1.21
ATPAF1-211ENST00000534216 GDF11O95390 407 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 CYP2E1P05181 493 aaPredicted RBP7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 NID1P14543 1247 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 EIF2AK2P19525 551 aaKnown RBP7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 EHHADHQ08426 723 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 KCNA1Q09470 495 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 COL13A1Q5TAT6 717 aaPredicted RBP7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 ELMSAN1Q6PJG2 1045 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 TMEM151AQ8N4L1 468 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 PLVAPQ9BX97 442 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 NOP53Q9NZM5 478 aaKnown RBP7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 CNTN3Q9P232 1028 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 BRPF3Q9ULD4 1205 aa7.48□□□□□ -1.21
ATPAF1-211ENST00000534216 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
ATPAF1-211ENST00000534216 HYAL2Q12891 473 aa7.47□□□□□ -1.21
ATPAF1-211ENST00000534216 TTC9Q92623 222 aa7.47□□□□□ -1.21
ATPAF1-211ENST00000534216 DCAF5Q96JK2 942 aa7.47□□□□□ -1.21
ATPAF1-211ENST00000534216 SMG9Q9H0W8 520 aaKnown RBP7.47□□□□□ -1.21
ATPAF1-211ENST00000534216 NDUFB5O43674 189 aa7.46□□□□□ -1.22
ATPAF1-211ENST00000534216 KIF4AO95239 1232 aa7.46□□□□□ -1.22
ATPAF1-211ENST00000534216 GHRHP01286 108 aa7.46□□□□□ -1.22
ATPAF1-211ENST00000534216 C1orf127Q8N9H9 656 aa7.46□□□□□ -1.22
ATPAF1-211ENST00000534216 PLD4Q96BZ4 506 aa7.46□□□□□ -1.22
ATPAF1-211ENST00000534216 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
ATPAF1-211ENST00000534216 IVNS1ABPQ9Y6Y0 642 aa7.46□□□□□ -1.22
ATPAF1-211ENST00000534216 TNFRSF21O75509 655 aa7.45□□□□□ -1.22
ATPAF1-211ENST00000534216 PDIA4P13667 645 aaKnown RBP7.45□□□□□ -1.22
ATPAF1-211ENST00000534216 GRIK5Q16478 980 aa7.45□□□□□ -1.22
ATPAF1-211ENST00000534216 ALYREFQ86V81 257 aaKnown RBP7.45□□□□□ -1.22
ATPAF1-211ENST00000534216 RBSNQ9H1K0 784 aa7.45□□□□□ -1.22
ATPAF1-211ENST00000534216 CHRDQ9H2X0 955 aa7.45□□□□□ -1.22
ATPAF1-211ENST00000534216 KANSL3Q9P2N6 904 aa7.45□□□□□ -1.22
ATPAF1-211ENST00000534216 SPDYE3A6NKU9 549 aa7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 CES1P23141 567 aa7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 SNX29Q8TEQ0 813 aa7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 SPACA7Q96KW9 195 aa7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 CITED4Q96RK1 184 aa7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 BIN2Q9UBW5 565 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 FOXD3Q9UJU5 478 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-211ENST00000534216 PHACTR2O75167 634 aa7.43□□□□□ -1.22
ATPAF1-211ENST00000534216 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
ATPAF1-211ENST00000534216 ILDR2Q71H61 639 aa7.43□□□□□ -1.22
ATPAF1-211ENST00000534216 NCAPG2Q86XI2 1143 aa7.43□□□□□ -1.22
ATPAF1-211ENST00000534216 CEP120Q8N960 986 aa7.43□□□□□ -1.22
ATPAF1-211ENST00000534216 PMEPA1Q969W9 287 aa7.43□□□□□ -1.22
ATPAF1-211ENST00000534216 SALL4Q9UJQ4 1053 aa7.43□□□□□ -1.22
ATPAF1-211ENST00000534216 KRBA1A5PL33 1030 aa7.42□□□□□ -1.22
ATPAF1-211ENST00000534216 PATL2C9JE40 543 aaKnown RBP7.42□□□□□ -1.22
ATPAF1-211ENST00000534216 ATP11AP98196 1134 aa7.42□□□□□ -1.22
ATPAF1-211ENST00000534216 PDE3BQ13370 1112 aa7.42□□□□□ -1.22
ATPAF1-211ENST00000534216 DMRTC2Q8IXT2 367 aaPredicted RBP7.42□□□□□ -1.22
ATPAF1-211ENST00000534216 FAM129BQ96TA1 746 aa7.42□□□□□ -1.22
ATPAF1-211ENST00000534216 EREGO14944 169 aa7.41□□□□□ -1.22
ATPAF1-211ENST00000534216 IGHA2P01877 340 aa7.41□□□□□ -1.22
ATPAF1-211ENST00000534216 SPATA31C1P0DKV0 1188 aa7.41□□□□□ -1.22
ATPAF1-211ENST00000534216 PRRT3Q5FWE3 981 aa7.41□□□□□ -1.22
ATPAF1-211ENST00000534216 MSL1Q68DK7 614 aa7.41□□□□□ -1.22
ATPAF1-211ENST00000534216 RASSF4Q9H2L5 321 aa7.41□□□□□ -1.22
ATPAF1-211ENST00000534216 A0A0A0MRY4 1105 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 FAM229AH3BQW9 127 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 SMNDC1O75940 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 BAG6P46379 1132 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 TRIM28Q13263 835 aaKnown RBP7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 GDF6Q6KF10 455 aaPredicted RBP7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 KCTD17Q8N5Z5 321 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 PBX4Q9BYU1 374 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 ZFYVE28Q9HCC9 887 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 TRIM33Q9UPN9 1127 aa7.4□□□□□ -1.22
ATPAF1-211ENST00000534216 ITGB2P05107 769 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 ACPPP15309 386 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 PLA2G4EQ3MJ16 856 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 XP32Q5T750 250 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 CEP135Q66GS9 1140 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 AEBP1Q8IUX7 1158 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 TMC1Q8TDI8 760 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 DCTN4Q9UJW0 460 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 AMOTL2Q9Y2J4 779 aa7.39□□□□□ -1.23
ATPAF1-211ENST00000534216 GPR182O15218 404 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 EDN3P14138 238 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 RAC1P63000 192 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 CACTIN-AS1Q8N1I8 211 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 DTWD1Q8N5C7 304 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 IL22RA1Q8N6P7 574 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 DMRTB1Q96MA1 342 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 DZANK1Q9NVP4 752 aa7.38□□□□□ -1.23
ATPAF1-211ENST00000534216 NFKBIEO00221 500 aa7.37□□□□□ -1.23
ATPAF1-211ENST00000534216 NEFLP07196 543 aa7.37□□□□□ -1.23
ATPAF1-211ENST00000534216 ADAMTSL4Q6UY14 1074 aa7.37□□□□□ -1.23
ATPAF1-211ENST00000534216 TMC7Q7Z402 723 aa7.37□□□□□ -1.23
ATPAF1-211ENST00000534216 FMR1NBQ8N0W7 255 aaPredicted RBP7.37□□□□□ -1.23
ATPAF1-211ENST00000534216 POP1Q99575 1024 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms