RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
ITGB1-219ENST00000534049 NUDT16Q96DE0 195 aaKnown RBP7.51□□□□□ -1.21
ITGB1-219ENST00000534049 SMG9Q9H0W8 520 aaKnown RBP7.51□□□□□ -1.21
ITGB1-219ENST00000534049 ZBTB39O15060 712 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 GATA4P43694 442 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 BAG6P46379 1132 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 EHHADHQ08426 723 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 XKR5Q6UX68 686 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 NSUN5Q96P11 429 aaKnown RBP7.5□□□□□ -1.21
ITGB1-219ENST00000534049 MUC3BQ9H195 1237 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 EGFL7Q9UHF1 273 aa7.5□□□□□ -1.21
ITGB1-219ENST00000534049 SCNN1AP37088 669 aa7.49□□□□□ -1.21
ITGB1-219ENST00000534049 EIF1AXP47813 144 aaKnown RBP7.49□□□□□ -1.21
ITGB1-219ENST00000534049 FKBP4Q02790 459 aaKnown RBP eCLIP7.49□□□□□ -1.21
ITGB1-219ENST00000534049 GRIK5Q16478 980 aa7.49□□□□□ -1.21
ITGB1-219ENST00000534049 ILDR2Q71H61 639 aa7.49□□□□□ -1.21
ITGB1-219ENST00000534049 ZNF438Q7Z4V0 828 aa7.49□□□□□ -1.21
ITGB1-219ENST00000534049 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
ITGB1-219ENST00000534049 PMEPA1Q969W9 287 aa7.49□□□□□ -1.21
ITGB1-219ENST00000534049 ELP3Q9H9T3 547 aa7.49□□□□□ -1.21
ITGB1-219ENST00000534049 SUPT5HO00267 1087 aaKnown RBP7.48□□□□□ -1.21
ITGB1-219ENST00000534049 KIF4AO95239 1232 aa7.48□□□□□ -1.21
ITGB1-219ENST00000534049 MPSTP25325 297 aa7.48□□□□□ -1.21
ITGB1-219ENST00000534049 DNM1Q05193 864 aaKnown RBP7.48□□□□□ -1.21
ITGB1-219ENST00000534049 HFE2Q6ZVN8 426 aa7.48□□□□□ -1.21
ITGB1-219ENST00000534049 DMRTC2Q8IXT2 367 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-219ENST00000534049 EDEM1Q92611 657 aa7.48□□□□□ -1.21
ITGB1-219ENST00000534049 LENG1Q96BZ8 264 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-219ENST00000534049 FAM229AH3BQW9 127 aa7.47□□□□□ -1.21
ITGB1-219ENST00000534049 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.213e-8■□□□□ 9.4
ITGB1-219ENST00000534049 PDGFAP04085 211 aa7.47□□□□□ -1.21
ITGB1-219ENST00000534049 AAMPQ13685 434 aa7.47□□□□□ -1.21
ITGB1-219ENST00000534049 PHLDB3Q6NSJ2 640 aa7.47□□□□□ -1.21
ITGB1-219ENST00000534049 FBXO11Q86XK2 927 aa7.47□□□□□ -1.21
ITGB1-219ENST00000534049 ARID3AQ99856 593 aa7.47□□□□□ -1.21
ITGB1-219ENST00000534049 TIMELESSQ9UNS1 1208 aa7.47□□□□□ -1.21
ITGB1-219ENST00000534049 FAM177BA6PVY3 158 aa7.46□□□□□ -1.22
ITGB1-219ENST00000534049 J3QW42 95 aa7.46□□□□□ -1.22
ITGB1-219ENST00000534049 ATCAYQ86WG3 371 aa7.46□□□□□ -1.22
ITGB1-219ENST00000534049 K7ELQ4 463 aaPredicted RBP7.45□□□□□ -1.22
ITGB1-219ENST00000534049 ABL1P00519 1130 aa7.45□□□□□ -1.22
ITGB1-219ENST00000534049 GRIK4Q16099 956 aa7.45□□□□□ -1.22
ITGB1-219ENST00000534049 NCAPG2Q86XI2 1143 aa7.45□□□□□ -1.22
ITGB1-219ENST00000534049 ADAM23O75077 832 aa7.44□□□□□ -1.22
ITGB1-219ENST00000534049 ADGRE1Q14246 886 aa7.44□□□□□ -1.22
ITGB1-219ENST00000534049 C8orf34Q49A92 452 aa7.44□□□□□ -1.22
ITGB1-219ENST00000534049 GDF6Q6KF10 455 aaPredicted RBP7.44□□□□□ -1.22
ITGB1-219ENST00000534049 IGF2-ASQ6U949 168 aa7.44□□□□□ -1.22
ITGB1-219ENST00000534049 TXNRD3Q86VQ6 643 aa7.44□□□□□ -1.22
ITGB1-219ENST00000534049 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
ITGB1-219ENST00000534049 SELPP16109 830 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 CES1P23141 567 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 MTMR3Q13615 1198 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 MBTPS1Q14703 1052 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 SUZ12Q15022 739 aaKnown RBP7.43□□□□□ -1.22
ITGB1-219ENST00000534049 SNX29Q8TEQ0 813 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 TMEM63CQ9P1W3 806 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 USP21Q9UK80 565 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
ITGB1-219ENST00000534049 ICMTO60725 284 aa7.42□□□□□ -1.22
ITGB1-219ENST00000534049 GLYCTKQ8IVS8 523 aa7.42□□□□□ -1.22
ITGB1-219ENST00000534049 CEP120Q8N960 986 aa7.42□□□□□ -1.22
ITGB1-219ENST00000534049 RETREG2Q8NC44 543 aa7.42□□□□□ -1.22
ITGB1-219ENST00000534049 PBX4Q9BYU1 374 aa7.42□□□□□ -1.22
ITGB1-219ENST00000534049 POLIQ9UNA4 740 aa7.42□□□□□ -1.22
ITGB1-219ENST00000534049 PTPRAP18433 802 aa7.41□□□□□ -1.22
ITGB1-219ENST00000534049 CEP135Q66GS9 1140 aa7.41□□□□□ -1.22
ITGB1-219ENST00000534049 FAM117BQ6P1L5 589 aa7.41□□□□□ -1.22
ITGB1-219ENST00000534049 CCER1Q8TC90 406 aaPredicted RBP7.41□□□□□ -1.22
ITGB1-219ENST00000534049 MRPL18Q9H0U6 180 aaKnown RBP7.41□□□□□ -1.22
ITGB1-219ENST00000534049 GGNBP2Q9H3C7 697 aa7.41□□□□□ -1.22
ITGB1-219ENST00000534049 TRIM33Q9UPN9 1127 aa7.41□□□□□ -1.22
ITGB1-219ENST00000534049 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 DLL1O00548 723 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 FZD6O60353 706 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 PHACTR2O75167 634 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 NEFLP07196 543 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 EDN3P14138 238 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 CDC27P30260 824 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 ZNF211Q13398 564 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-219ENST00000534049 COL13A1Q5TAT6 717 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-219ENST00000534049 GJD3Q8N144 294 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 SALL4Q9UJQ4 1053 aa7.4□□□□□ -1.22
ITGB1-219ENST00000534049 H3BRB1 525 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 NDUFB5O43674 189 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 DEAF1O75398 565 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-219ENST00000534049 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 CYP2E1P05181 493 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-219ENST00000534049 FURINP09958 794 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 CABP4P57796 275 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 ATP11AP98196 1134 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 DOC2BQ14184 412 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 C1orf127Q8N9H9 656 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 CITED4Q96RK1 184 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 RASSF4Q9H2L5 321 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 TUT1Q9H6E5 874 aaKnown RBP7.39□□□□□ -1.23
ITGB1-219ENST00000534049 CNTN3Q9P232 1028 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 BRPF3Q9ULD4 1205 aa7.39□□□□□ -1.23
ITGB1-219ENST00000534049 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms