RNA–Protein interactions for RNA: ENST00000532956.5

SIRT3-215, Transcript of sirtuin 3, human

TSL 2 BASIC

Gene SIRT3, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIRT3-215	ENST00000532956	CACNA1F	O60840	1977 aa		27.89	■■■□□ 2.06
SIRT3-215	ENST00000532956	ADAMTSL1	Q8N6G6	1762 aa		27.88	■■■□□ 2.05
SIRT3-215	ENST00000532956		E9PSI1	815 aa		27.88	■■■□□ 2.05
SIRT3-215	ENST00000532956	CCER2	I3L3R5	266 aa		27.88	■■■□□ 2.05
SIRT3-215	ENST00000532956	DOK7	Q18PE1	504 aa		27.88	■■■□□ 2.05
SIRT3-215	ENST00000532956	USP50	Q70EL3	339 aa	Predicted RBP	27.88	■■■□□ 2.05
SIRT3-215	ENST00000532956	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.88	■■■□□ 2.05
SIRT3-215	ENST00000532956	RTL9	Q8NET4	1388 aa		27.87	■■■□□ 2.05
SIRT3-215	ENST00000532956	BEND3	Q5T5X7	828 aa		27.87	■■■□□ 2.05
SIRT3-215	ENST00000532956	ADARB2	Q9NS39	739 aa	Known RBP	27.87	■■■□□ 2.05
SIRT3-215	ENST00000532956	ECE2	O60344	883 aa		27.86	■■■□□ 2.05
SIRT3-215	ENST00000532956	BSDC1	Q9NW68	430 aa	Predicted RBP	27.86	■■■□□ 2.05
SIRT3-215	ENST00000532956	XDH	P47989	1333 aa		27.86	■■■□□ 2.05
SIRT3-215	ENST00000532956	PSMD14	O00487	310 aa		27.85	■■■□□ 2.05
SIRT3-215	ENST00000532956	JMY	Q8N9B5	988 aa		27.85	■■■□□ 2.05
SIRT3-215	ENST00000532956		G3V3G9	751 aa		27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	ITGA6	P23229	1130 aa		27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	SLFN5	Q08AF3	891 aa		27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	FAM161A	Q3B820	660 aa		27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	DCAF8	Q5TAQ9	597 aa		27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	KCNQ5	Q9NR82	932 aa		27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	MINPP1	Q9UNW1	487 aa		27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.83	■■■□□ 2.05
SIRT3-215	ENST00000532956	CSF1R	P07333	972 aa		27.82	■■■□□ 2.04
SIRT3-215	ENST00000532956	ATP2B4	P23634	1241 aa		27.82	■■■□□ 2.04
SIRT3-215	ENST00000532956	IGHMBP2	P38935	993 aa	Known RBP	27.82	■■■□□ 2.04
SIRT3-215	ENST00000532956	CNOT7	Q9UIV1	285 aa	Known RBP	27.82	■■■□□ 2.04
SIRT3-215	ENST00000532956	TMEM88B	A6NKF7	163 aa		27.81	■■■□□ 2.04
SIRT3-215	ENST00000532956	SLC4A10	Q6U841	1118 aa		27.81	■■■□□ 2.04
SIRT3-215	ENST00000532956	SHTN1	A0MZ66	631 aa		27.8	■■■□□ 2.04
SIRT3-215	ENST00000532956	MICALL2	Q8IY33	904 aa		27.8	■■■□□ 2.04
SIRT3-215	ENST00000532956	DPF2	Q92785	391 aa		27.8	■■■□□ 2.04
SIRT3-215	ENST00000532956	CDCA7L	Q96GN5	454 aa		27.8	■■■□□ 2.04
SIRT3-215	ENST00000532956	MKRN1	Q9UHC7	482 aa	Known RBP	27.8	■■■□□ 2.04
SIRT3-215	ENST00000532956	MYH3	P11055	1940 aa		27.8	■■■□□ 2.04
SIRT3-215	ENST00000532956		H7C1D1	291 aa		27.79	■■■□□ 2.04
SIRT3-215	ENST00000532956	MRPL50	Q8N5N7	158 aa	Known RBP	27.79	■■■□□ 2.04
SIRT3-215	ENST00000532956	WTIP	A6NIX2	430 aa	Predicted RBP	27.78	■■■□□ 2.04
SIRT3-215	ENST00000532956	GRM8	O00222	908 aa		27.78	■■■□□ 2.04
SIRT3-215	ENST00000532956	TRPM4	Q8TD43	1214 aa		27.78	■■■□□ 2.04
SIRT3-215	ENST00000532956	MPHOSPH8	Q99549	860 aa		27.78	■■■□□ 2.04
SIRT3-215	ENST00000532956	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.78	■■■□□ 2.04
SIRT3-215	ENST00000532956	PCNT	O95613	3336 aa		27.77	■■■□□ 2.04
SIRT3-215	ENST00000532956	ALDH1L1	O75891	902 aa		27.77	■■■□□ 2.04
SIRT3-215	ENST00000532956	FOXO4	P98177	505 aa		27.77	■■■□□ 2.04
SIRT3-215	ENST00000532956	SRCIN1	Q9C0H9	1055 aa		27.77	■■■□□ 2.04
SIRT3-215	ENST00000532956	ANKRD18B	A2A2Z9	1011 aa		27.76	■■■□□ 2.03
SIRT3-215	ENST00000532956	RPS12	P25398	132 aa	Known RBP	27.76	■■■□□ 2.03
SIRT3-215	ENST00000532956	CCT4	P50991	539 aa	Known RBP	27.76	■■■□□ 2.03
SIRT3-215	ENST00000532956	HIRA	P54198	1017 aa	Predicted RBP	27.76	■■■□□ 2.03
SIRT3-215	ENST00000532956	CHMP3	Q9Y3E7	222 aa		27.76	■■■□□ 2.03
SIRT3-215	ENST00000532956	VIL1	P09327	827 aa	Known RBP	27.75	■■■□□ 2.03
SIRT3-215	ENST00000532956	FMR1	Q06787	632 aa	Known RBP eCLIP	27.75	■■■□□ 2.03
SIRT3-215	ENST00000532956	SSH1	Q8WYL5	1049 aa		27.75	■■■□□ 2.03
SIRT3-215	ENST00000532956	CNTNAP1	P78357	1384 aa		27.74	■■■□□ 2.03
SIRT3-215	ENST00000532956	TRAF5	O00463	557 aa		27.74	■■■□□ 2.03
SIRT3-215	ENST00000532956	IFIT5	Q13325	482 aa	Known RBP	27.74	■■■□□ 2.03
SIRT3-215	ENST00000532956	EPHA10	Q5JZY3	1008 aa		27.74	■■■□□ 2.03
SIRT3-215	ENST00000532956	SAMD7	Q7Z3H4	446 aa		27.74	■■■□□ 2.03
SIRT3-215	ENST00000532956	ZC3H15	Q8WU90	426 aa	Known RBP	27.74	■■■□□ 2.03
SIRT3-215	ENST00000532956	MED23	Q9ULK4	1368 aa		27.73	■■■□□ 2.03
SIRT3-215	ENST00000532956	LMBR1L	Q6UX01	489 aa		27.73	■■■□□ 2.03
SIRT3-215	ENST00000532956	ANKRD2	Q9GZV1	360 aa		27.73	■■■□□ 2.03
SIRT3-215	ENST00000532956	PGAP2	Q9UHJ9	254 aa		27.73	■■■□□ 2.03
SIRT3-215	ENST00000532956	LEMD3	Q9Y2U8	911 aa		27.73	■■■□□ 2.03
SIRT3-215	ENST00000532956	PTPRC	P08575	1304 aa		27.72	■■■□□ 2.03
SIRT3-215	ENST00000532956	SPEF2	Q9C093	1822 aa		27.72	■■■□□ 2.03
SIRT3-215	ENST00000532956	PODN	Q7Z5L7	613 aa		27.72	■■■□□ 2.03
SIRT3-215	ENST00000532956	TRMT2A	Q8IZ69	625 aa	Known RBP	27.72	■■■□□ 2.03
SIRT3-215	ENST00000532956	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.71	■■■□□ 2.03
SIRT3-215	ENST00000532956	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.71	■■■□□ 2.03
SIRT3-215	ENST00000532956	ZNF804B	A4D1E1	1349 aa		27.7	■■■□□ 2.03
SIRT3-215	ENST00000532956	CHRND	Q07001	517 aa		27.7	■■■□□ 2.02
SIRT3-215	ENST00000532956	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.7	■■■□□ 2.02
SIRT3-215	ENST00000532956	ABT1	Q9ULW3	272 aa	Known RBP	27.7	■■■□□ 2.02
SIRT3-215	ENST00000532956	SCN9A	Q15858	1988 aa		27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	USP17L3	A6NCW0	530 aa		27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	USP17L4	A6NCW7	530 aa		27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	EGFR	P00533	1210 aa		27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	CCDC57	Q2TAC2	916 aa		27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	ALDH1L2	Q3SY69	923 aa		27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	RBM26	Q5T8P6	1007 aa	Known RBP	27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	USP17L1	Q7RTZ2	530 aa		27.69	■■■□□ 2.02
SIRT3-215	ENST00000532956	KCNJ4	P48050	445 aa		27.68	■■■□□ 2.02
SIRT3-215	ENST00000532956	TXNRD3	Q86VQ6	643 aa		27.68	■■■□□ 2.02
SIRT3-215	ENST00000532956	RASSF10	A6NK89	507 aa		27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	VEGFB	P49765	207 aa		27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	CST9	Q5W186	159 aa		27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	AGBL3	Q8NEM8	1001 aa		27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	SUCLG2	Q96I99	432 aa		27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	COA1	Q9GZY4	146 aa		27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	SMC4	Q9NTJ3	1288 aa		27.67	■■■□□ 2.02
SIRT3-215	ENST00000532956	KLRK1	P26718	216 aa		27.66	■■■□□ 2.02
SIRT3-215	ENST00000532956	KIF4B	Q2VIQ3	1234 aa		27.66	■■■□□ 2.02
SIRT3-215	ENST00000532956	DEFB115	Q30KQ5	88 aa		27.66	■■■□□ 2.02
SIRT3-215	ENST00000532956	TAF7L	Q5H9L4	462 aa		27.66	■■■□□ 2.02
SIRT3-215	ENST00000532956	CDC37L1	Q7L3B6	337 aa		27.66	■■■□□ 2.02
SIRT3-215	ENST00000532956	ZNF594	Q96JF6	807 aa	Predicted RBP	27.66	■■■□□ 2.02
SIRT3-215	ENST00000532956	TAF5L	O75529	589 aa		27.65	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms