RNA–Protein interactions for RNA: ENST00000531608.1

SNX19-210, Transcript of sorting nexin 19, humanhuman

TSL 4

Gene SNX19, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-210ENST00000531608 ZC3H12CQ9C0D7 883 aaKnown RBP23.23■■□□□ 1.31
SNX19-210ENST00000531608 CHPF2Q9P2E5 772 aa23.23■■□□□ 1.31
SNX19-210ENST00000531608 ATP5J2-PTCD1G3V325 749 aa23.22■■□□□ 1.31
SNX19-210ENST00000531608 G3V3G9 751 aa23.22■■□□□ 1.31
SNX19-210ENST00000531608 VIL1P09327 827 aaKnown RBP23.22■■□□□ 1.31
SNX19-210ENST00000531608 TMPOP42166 694 aaKnown RBP23.22■■□□□ 1.31
SNX19-210ENST00000531608 RPS8P62241 208 aaKnown RBP23.22■■□□□ 1.31
SNX19-210ENST00000531608 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
SNX19-210ENST00000531608 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
SNX19-210ENST00000531608 DCAF8Q5TAQ9 597 aa23.22■■□□□ 1.31
SNX19-210ENST00000531608 CTU1Q7Z7A3 348 aaKnown RBP23.22■■□□□ 1.31
SNX19-210ENST00000531608 CDCA5Q96FF9 252 aa23.22■■□□□ 1.31
SNX19-210ENST00000531608 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
SNX19-210ENST00000531608 POLR2AP24928 1970 aaKnown RBP23.21■■□□□ 1.31
SNX19-210ENST00000531608 REM2Q8IYK8 340 aaPredicted RBP23.21■■□□□ 1.31
SNX19-210ENST00000531608 PDE4DIPQ5VU43 2346 aa23.21■■□□□ 1.31
SNX19-210ENST00000531608 ASTN2O75129 1339 aaPredicted RBP23.2■■□□□ 1.3
SNX19-210ENST00000531608 LAS1LQ9Y4W2 734 aaKnown RBP23.2■■□□□ 1.3
SNX19-210ENST00000531608 CHL1O00533 1208 aa23.19■■□□□ 1.3
SNX19-210ENST00000531608 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
SNX19-210ENST00000531608 HDGFL1Q5TGJ6 251 aa23.19■■□□□ 1.3
SNX19-210ENST00000531608 SCARF1Q14162 830 aa23.18■■□□□ 1.3
SNX19-210ENST00000531608 ANGEL2Q5VTE6 544 aaKnown RBP23.18■■□□□ 1.3
SNX19-210ENST00000531608 ANKIB1Q9P2G1 1089 aa23.18■■□□□ 1.3
SNX19-210ENST00000531608 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
SNX19-210ENST00000531608 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
SNX19-210ENST00000531608 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
SNX19-210ENST00000531608 RASAL3Q86YV0 1011 aa23.17■■□□□ 1.3
SNX19-210ENST00000531608 PODXL2Q9NZ53 605 aa23.17■■□□□ 1.3
SNX19-210ENST00000531608 AKAP11Q9UKA4 1901 aa23.16■■□□□ 1.3
SNX19-210ENST00000531608 UFL1O94874 794 aa23.16■■□□□ 1.3
SNX19-210ENST00000531608 ZNF280AP59817 542 aaPredicted RBP23.16■■□□□ 1.3
SNX19-210ENST00000531608 FKBP1BP68106 108 aa23.16■■□□□ 1.3
SNX19-210ENST00000531608 AGBL3Q8NEM8 1001 aa23.16■■□□□ 1.3
SNX19-210ENST00000531608 TRIM28Q13263 835 aaKnown RBP23.15■■□□□ 1.3
SNX19-210ENST00000531608 PRPF38BQ5VTL8 546 aaKnown RBP23.15■■□□□ 1.3
SNX19-210ENST00000531608 RSBN1LQ6PCB5 846 aaPredicted RBP23.15■■□□□ 1.3
SNX19-210ENST00000531608 HYPKQ9NX55 129 aa23.15■■□□□ 1.3
SNX19-210ENST00000531608 GGA1Q9UJY5 639 aa23.15■■□□□ 1.3
SNX19-210ENST00000531608 COL4A1P02462 1669 aa23.14■■□□□ 1.29
SNX19-210ENST00000531608 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.29
SNX19-210ENST00000531608 HDAC9Q9UKV0 1011 aa23.14■■□□□ 1.29
SNX19-210ENST00000531608 HPS5Q9UPZ3 1129 aa23.14■■□□□ 1.29
SNX19-210ENST00000531608 HOXB7P09629 217 aa23.13■■□□□ 1.29
SNX19-210ENST00000531608 HSP90B1P14625 803 aaKnown RBP23.13■■□□□ 1.29
SNX19-210ENST00000531608 PKN2Q16513 984 aaKnown RBP23.13■■□□□ 1.29
SNX19-210ENST00000531608 USP17L8P0C7I0 530 aa23.12■■□□□ 1.29
SNX19-210ENST00000531608 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
SNX19-210ENST00000531608 MYOZ2Q9NPC6 264 aa23.12■■□□□ 1.29
SNX19-210ENST00000531608 RIC3Q7Z5B4 369 aa23.11■■□□□ 1.29
SNX19-210ENST00000531608 CCDC146Q8IYE0 955 aa23.11■■□□□ 1.29
SNX19-210ENST00000531608 SCN9AQ15858 1988 aa23.1■■□□□ 1.29
SNX19-210ENST00000531608 PITPNM2Q9BZ72 1349 aa23.1■■□□□ 1.29
SNX19-210ENST00000531608 TBC1D8O95759 1140 aa23.1■■□□□ 1.29
SNX19-210ENST00000531608 MOB2Q70IA6 237 aa23.1■■□□□ 1.29
SNX19-210ENST00000531608 GMLQ99445 158 aa23.1■■□□□ 1.29
SNX19-210ENST00000531608 ZNF609O15014 1411 aa23.09■■□□□ 1.29
SNX19-210ENST00000531608 UBE2Q2LH0YL09 131 aa23.09■■□□□ 1.29
SNX19-210ENST00000531608 CCDC152Q4G0S7 254 aa23.09■■□□□ 1.29
SNX19-210ENST00000531608 ZNF296Q8WUU4 475 aaPredicted RBP23.09■■□□□ 1.29
SNX19-210ENST00000531608 SCAF8Q9UPN6 1271 aaKnown RBP23.09■■□□□ 1.29
SNX19-210ENST00000531608 TRIM35Q9UPQ4 493 aa23.09■■□□□ 1.29
SNX19-210ENST00000531608 USP17L3A6NCW0 530 aa23.08■■□□□ 1.29
SNX19-210ENST00000531608 USP17L4A6NCW7 530 aa23.08■■□□□ 1.29
SNX19-210ENST00000531608 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
SNX19-210ENST00000531608 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.29
SNX19-210ENST00000531608 USP17L1Q7RTZ2 530 aa23.08■■□□□ 1.29
SNX19-210ENST00000531608 TTLL12Q14166 644 aaPredicted RBP23.07■■□□□ 1.28
SNX19-210ENST00000531608 PRAMEF18Q5VWM3 479 aa23.07■■□□□ 1.28
SNX19-210ENST00000531608 PODNQ7Z5L7 613 aa23.07■■□□□ 1.28
SNX19-210ENST00000531608 XDHP47989 1333 aa23.07■■□□□ 1.28
SNX19-210ENST00000531608 PAPPA2Q9BXP8 1791 aa23.06■■□□□ 1.28
SNX19-210ENST00000531608 RALBP1Q15311 655 aa23.06■■□□□ 1.28
SNX19-210ENST00000531608 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
SNX19-210ENST00000531608 PDE8AO60658 829 aa23.05■■□□□ 1.28
SNX19-210ENST00000531608 ATP2B4P23634 1241 aa23.05■■□□□ 1.28
SNX19-210ENST00000531608 TM4SF4P48230 202 aa23.05■■□□□ 1.28
SNX19-210ENST00000531608 ANKRD18AQ8IVF6 992 aa23.05■■□□□ 1.28
SNX19-210ENST00000531608 RUNDC1Q96C34 613 aa23.05■■□□□ 1.28
SNX19-210ENST00000531608 MYD88Q99836 296 aa23.05■■□□□ 1.28
SNX19-210ENST00000531608 PCCAP05165 728 aaPredicted RBP23.04■■□□□ 1.28
SNX19-210ENST00000531608 NBPF9Q3BBW0 867 aa23.04■■□□□ 1.28
SNX19-210ENST00000531608 CCDC191Q8NCU4 936 aa23.04■■□□□ 1.28
SNX19-210ENST00000531608 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
SNX19-210ENST00000531608 GPR25O00155 361 aa23.03■■□□□ 1.28
SNX19-210ENST00000531608 NF2P35240 595 aa23.03■■□□□ 1.28
SNX19-210ENST00000531608 OGFOD1Q8N543 542 aa23.03■■□□□ 1.28
SNX19-210ENST00000531608 PHAXQ9H814 394 aaKnown RBP23.03■■□□□ 1.28
SNX19-210ENST00000531608 MKRN3Q13064 507 aaKnown RBP23.02■■□□□ 1.28
SNX19-210ENST00000531608 NOM1Q5C9Z4 860 aaKnown RBP23.02■■□□□ 1.28
SNX19-210ENST00000531608 FBXO46Q6PJ61 603 aaPredicted RBP23.02■■□□□ 1.28
SNX19-210ENST00000531608 CWC25Q9NXE8 425 aaPredicted RBP23.02■■□□□ 1.28
SNX19-210ENST00000531608 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
SNX19-210ENST00000531608 SREBF2Q12772 1141 aa23■■□□□ 1.27
SNX19-210ENST00000531608 WDR43Q15061 677 aaKnown RBP eCLIP23■■□□□ 1.27
SNX19-210ENST00000531608 FBXW7Q969H0 707 aa23■■□□□ 1.27
SNX19-210ENST00000531608 WTIPA6NIX2 430 aaPredicted RBP22.99■■□□□ 1.27
SNX19-210ENST00000531608 WNT10BO00744 389 aa22.99■■□□□ 1.27
SNX19-210ENST00000531608 FKTNO75072 461 aa22.99■■□□□ 1.27
SNX19-210ENST00000531608 CDC5LQ99459 802 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms