RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	XDH	P47989	1333 aa		32.46	■■■□□ 2.79
PICALM-215	ENST00000531558	ZNF541	Q9H0D2	1346 aa		32.46	■■■□□ 2.79
PICALM-215	ENST00000531558	SPEF2	Q9C093	1822 aa		32.45	■■■□□ 2.79
PICALM-215	ENST00000531558	C6orf229	H3BNL8	230 aa		32.45	■■■□□ 2.79
PICALM-215	ENST00000531558	CCDC57	Q2TAC2	916 aa		32.45	■■■□□ 2.79
PICALM-215	ENST00000531558	ANKRD44	Q8N8A2	993 aa		32.45	■■■□□ 2.79
PICALM-215	ENST00000531558	CLUAP1	Q96AJ1	413 aa		32.44	■■■□□ 2.78
PICALM-215	ENST00000531558	GGA1	Q9UJY5	639 aa		32.44	■■■□□ 2.78
PICALM-215	ENST00000531558	KIF3C	O14782	793 aa		32.43	■■■□□ 2.78
PICALM-215	ENST00000531558	UFL1	O94874	794 aa		32.43	■■■□□ 2.78
PICALM-215	ENST00000531558	UBTFL1	P0CB47	393 aa	Predicted RBP	32.43	■■■□□ 2.78
PICALM-215	ENST00000531558	WASHC4	Q2M389	1173 aa		32.42	■■■□□ 2.78
PICALM-215	ENST00000531558	EYA3	Q99504	573 aa		32.42	■■■□□ 2.78
PICALM-215	ENST00000531558	DDN	O94850	711 aa	Predicted RBP	32.41	■■■□□ 2.78
PICALM-215	ENST00000531558	EIF6	P56537	245 aa	Known RBP	32.41	■■■□□ 2.78
PICALM-215	ENST00000531558	GPR101	Q96P66	508 aa	Predicted RBP	32.41	■■■□□ 2.78
PICALM-215	ENST00000531558	TAF7L	Q5H9L4	462 aa		32.4	■■■□□ 2.78
PICALM-215	ENST00000531558	MEIS3	Q99687	375 aa		32.4	■■■□□ 2.78
PICALM-215	ENST00000531558	RRAGC	Q9HB90	399 aa		32.4	■■■□□ 2.78
PICALM-215	ENST00000531558	WDR90	Q96KV7	1748 aa		32.4	■■■□□ 2.78
PICALM-215	ENST00000531558	ATP2B4	P23634	1241 aa		32.39	■■■□□ 2.78
PICALM-215	ENST00000531558	ZNF594	Q96JF6	807 aa	Predicted RBP	32.39	■■■□□ 2.78
PICALM-215	ENST00000531558	YTHDC1	Q96MU7	727 aa	Known RBP	32.39	■■■□□ 2.78
PICALM-215	ENST00000531558	ZNRF3	Q9ULT6	936 aa		32.39	■■■□□ 2.78
PICALM-215	ENST00000531558	RIMBP2	O15034	1052 aa		32.38	■■■□□ 2.77
PICALM-215	ENST00000531558	ANKRD2	Q9GZV1	360 aa		32.38	■■■□□ 2.77
PICALM-215	ENST00000531558	RCAN3	Q9UKA8	241 aa		32.38	■■■□□ 2.77
PICALM-215	ENST00000531558	HDAC5	Q9UQL6	1122 aa		32.38	■■■□□ 2.77
PICALM-215	ENST00000531558	FTSJ3	Q8IY81	847 aa	Known RBP	32.37	■■■□□ 2.77
PICALM-215	ENST00000531558	TMEM57	Q8N5G2	664 aa		32.37	■■■□□ 2.77
PICALM-215	ENST00000531558	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.37	■■■□□ 2.77
PICALM-215	ENST00000531558	GNAI3	P08754	354 aa		32.36	■■■□□ 2.77
PICALM-215	ENST00000531558	CHRND	Q07001	517 aa		32.36	■■■□□ 2.77
PICALM-215	ENST00000531558	DZIP1L	Q8IYY4	767 aa	Known RBP	32.36	■■■□□ 2.77
PICALM-215	ENST00000531558	GPC2	Q8N158	579 aa		32.36	■■■□□ 2.77
PICALM-215	ENST00000531558	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.36	■■■□□ 2.77
PICALM-215	ENST00000531558	VEGFA	P15692	232 aa	Predicted RBP	32.35	■■■□□ 2.77
PICALM-215	ENST00000531558	LDHAL6A	Q6ZMR3	332 aa		32.35	■■■□□ 2.77
PICALM-215	ENST00000531558	LRRFIP2	Q9Y608	721 aa	Known RBP	32.35	■■■□□ 2.77
PICALM-215	ENST00000531558	POTEC	B2RU33	542 aa		32.34	■■■□□ 2.77
PICALM-215	ENST00000531558	CNNM1	Q9NRU3	951 aa		32.34	■■■□□ 2.77
PICALM-215	ENST00000531558	DBNDD1	Q9H9R9	158 aa		32.33	■■■□□ 2.77
PICALM-215	ENST00000531558	LEMD3	Q9Y2U8	911 aa		32.33	■■■□□ 2.77
PICALM-215	ENST00000531558	MED23	Q9ULK4	1368 aa		32.32	■■■□□ 2.77
PICALM-215	ENST00000531558	WTIP	A6NIX2	430 aa	Predicted RBP	32.32	■■■□□ 2.76
PICALM-215	ENST00000531558	YDJC	A8MPS7	323 aa		32.32	■■■□□ 2.76
PICALM-215	ENST00000531558	RLBP1	P12271	317 aa		32.32	■■■□□ 2.76
PICALM-215	ENST00000531558	CXCL9	Q07325	125 aa		32.32	■■■□□ 2.76
PICALM-215	ENST00000531558	GJA3	Q9Y6H8	435 aa		32.32	■■■□□ 2.76
PICALM-215	ENST00000531558	ECE2	O60344	883 aa		32.31	■■■□□ 2.76
PICALM-215	ENST00000531558	DOK7	Q18PE1	504 aa		32.31	■■■□□ 2.76
PICALM-215	ENST00000531558	ZNF804B	A4D1E1	1349 aa		32.3	■■■□□ 2.76
PICALM-215	ENST00000531558	IQCA1L	A6NCM1	817 aa		32.29	■■■□□ 2.76
PICALM-215	ENST00000531558	CIAPIN1	Q6FI81	312 aa		32.29	■■■□□ 2.76
PICALM-215	ENST00000531558	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.29	■■■□□ 2.76
PICALM-215	ENST00000531558	HELB	Q8NG08	1087 aa	Predicted RBP	32.29	■■■□□ 2.76
PICALM-215	ENST00000531558	PUS3	Q9BZE2	481 aa	Known RBP	32.29	■■■□□ 2.76
PICALM-215	ENST00000531558	TAF5L	O75529	589 aa		32.28	■■■□□ 2.76
PICALM-215	ENST00000531558	RAD17	O75943	681 aa		32.28	■■■□□ 2.76
PICALM-215	ENST00000531558	TOMM70	O94826	608 aa		32.28	■■■□□ 2.76
PICALM-215	ENST00000531558	KCNJ4	P48050	445 aa		32.28	■■■□□ 2.76
PICALM-215	ENST00000531558	RFX5	P48382	616 aa	Predicted RBP	32.28	■■■□□ 2.76
PICALM-215	ENST00000531558		A0A1B0GUL6	1792 aa		32.27	■■■□□ 2.76
PICALM-215	ENST00000531558	C1QTNF8	P60827	252 aa		32.27	■■■□□ 2.76
PICALM-215	ENST00000531558	ITPRIP	Q8IWB1	547 aa		32.27	■■■□□ 2.76
PICALM-215	ENST00000531558	KLHDC4	Q8TBB5	520 aa		32.27	■■■□□ 2.76
PICALM-215	ENST00000531558	RIPOR2	Q9Y4F9	1068 aa		32.27	■■■□□ 2.76
PICALM-215	ENST00000531558		G3V3G9	751 aa		32.26	■■■□□ 2.75
PICALM-215	ENST00000531558	TNIP1	Q15025	636 aa		32.26	■■■□□ 2.75
PICALM-215	ENST00000531558	DCAF8	Q5TAQ9	597 aa		32.26	■■■□□ 2.75
PICALM-215	ENST00000531558	GNAI2	P04899	355 aa		32.25	■■■□□ 2.75
PICALM-215	ENST00000531558	MS4A1	P11836	297 aa		32.25	■■■□□ 2.75
PICALM-215	ENST00000531558	PANK1	Q8TE04	598 aa		32.25	■■■□□ 2.75
PICALM-215	ENST00000531558	HACL1	Q9UJ83	578 aa		32.25	■■■□□ 2.75
PICALM-215	ENST00000531558	MROH5	Q6ZUA9	1318 aa		32.25	■■■□□ 2.75
PICALM-215	ENST00000531558	SCN4A	P35499	1836 aa		32.24	■■■□□ 2.75
PICALM-215	ENST00000531558	KLRK1	P26718	216 aa		32.24	■■■□□ 2.75
PICALM-215	ENST00000531558	SCNN1D	P51172	638 aa		32.24	■■■□□ 2.75
PICALM-215	ENST00000531558	LRRC24	Q50LG9	513 aa		32.24	■■■□□ 2.75
PICALM-215	ENST00000531558	RBM46	Q8TBY0	533 aa	Known RBP	32.24	■■■□□ 2.75
PICALM-215	ENST00000531558	SNAP23	O00161	211 aa		32.23	■■■□□ 2.75
PICALM-215	ENST00000531558	PLIN1	O60240	522 aa		32.23	■■■□□ 2.75
PICALM-215	ENST00000531558	PTPN12	Q05209	780 aa	Known RBP	32.23	■■■□□ 2.75
PICALM-215	ENST00000531558	TXNRD3	Q86VQ6	643 aa		32.23	■■■□□ 2.75
PICALM-215	ENST00000531558	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.23	■■■□□ 2.75
PICALM-215	ENST00000531558	MTX1	Q13505	466 aa		32.22	■■■□□ 2.75
PICALM-215	ENST00000531558	KCNQ5	Q9NR82	932 aa		32.22	■■■□□ 2.75
PICALM-215	ENST00000531558	IRS2	Q9Y4H2	1338 aa		32.22	■■■□□ 2.75
PICALM-215	ENST00000531558	PSMD14	O00487	310 aa		32.21	■■■□□ 2.75
PICALM-215	ENST00000531558	LMOD1	P29536	600 aa	Predicted RBP	32.21	■■■□□ 2.75
PICALM-215	ENST00000531558	C15orf52	Q6ZUT6	534 aa	Known RBP	32.21	■■■□□ 2.75
PICALM-215	ENST00000531558	PODN	Q7Z5L7	613 aa		32.21	■■■□□ 2.75
PICALM-215	ENST00000531558	EYA2	O00167	538 aa		32.2	■■■□□ 2.75
PICALM-215	ENST00000531558	GMPS	P49915	693 aa	Predicted RBP	32.2	■■■□□ 2.75
PICALM-215	ENST00000531558	METTL24	Q5JXM2	366 aa		32.2	■■■□□ 2.75
PICALM-215	ENST00000531558	COA1	Q9GZY4	146 aa		32.2	■■■□□ 2.75
PICALM-215	ENST00000531558	ZBTB7B	O15156	539 aa	Predicted RBP	32.19	■■■□□ 2.74
PICALM-215	ENST00000531558	EPHX2	P34913	555 aa		32.19	■■■□□ 2.74
PICALM-215	ENST00000531558	SCN9A	Q15858	1988 aa		32.19	■■■□□ 2.74
PICALM-215	ENST00000531558	SRGAP3	O43295	1099 aa		32.18	■■■□□ 2.74

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