RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	FAM35A	Q86V20	835 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ASB16	Q96NS5	453 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ADAMTS8	Q9UP79	889 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432	LOC102724428	A0A0B4J2F2	783 aa		11.12	□□□□□ -0.63
PPP6R3-223	ENST00000531432	EREG	O14944	169 aa		11.12	□□□□□ -0.63
PPP6R3-223	ENST00000531432	KIF4A	O95239	1232 aa		11.12	□□□□□ -0.63
PPP6R3-223	ENST00000531432	SIK1	P57059	783 aa		11.12	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ALKBH8	Q96BT7	664 aa	Known RBP	11.12	□□□□□ -0.63
PPP6R3-223	ENST00000531432	CES1	P23141	567 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	HYAL2	Q12891	473 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	PERM1	Q5SV97	790 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	PSAPL1	Q6NUJ1	521 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	C20orf204	Q6ZNR8	217 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	C8orf86	Q6ZUL3	223 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	LPIN3	Q9BQK8	851 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ZFYVE28	Q9HCC9	887 aa		11.11	□□□□□ -0.63
PPP6R3-223	ENST00000531432	TREH	O43280	583 aa		11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	EIF2AK2	P19525	551 aa	Known RBP	11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	DGKG	P49619	791 aa		11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	SNRPN	P63162	240 aa	Known RBP	11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	KANK3	Q6NY19	840 aa		11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	MICALL1	Q8N3F8	863 aa		11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	NUDT8	Q8WV74	236 aa		11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	RRAGC	Q9HB90	399 aa		11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432	SALL4	Q9UJQ4	1053 aa		11.1	□□□□□ -0.63
PPP6R3-223	ENST00000531432		M0R082	166 aa		11.09	□□□□□ -0.63
PPP6R3-223	ENST00000531432	DSC3	Q14574	896 aa		11.09	□□□□□ -0.63
PPP6R3-223	ENST00000531432	CCDC27	Q2M243	656 aa		11.09	□□□□□ -0.63
PPP6R3-223	ENST00000531432	USPL1	Q5W0Q7	1092 aa		11.09	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ZNF417	Q8TAU3	575 aa		11.09	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.09	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ACPP	P15309	386 aa		11.08	□□□□□ -0.64
PPP6R3-223	ENST00000531432	PMEPA1	Q969W9	287 aa		11.08	□□□□□ -0.64
PPP6R3-223	ENST00000531432	AMOTL2	Q9Y2J4	779 aa		11.08	□□□□□ -0.64
PPP6R3-223	ENST00000531432	GHRH	P01286	108 aa		11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	POLR3D	P05423	398 aa	Predicted RBP	11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	ELMSAN1	Q6PJG2	1045 aa		11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	NCAPG2	Q86XI2	1143 aa		11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	SMG9	Q9H0W8	520 aa	Known RBP	11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	FRRS1L	Q9P0K9	344 aa		11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	STK17A	Q9UEE5	414 aa		11.07	□□□□□ -0.64
PPP6R3-223	ENST00000531432	EIF1AY	O14602	144 aa	Known RBP	11.06	□□□□□ -0.64
PPP6R3-223	ENST00000531432	NEFL	P07196	543 aa		11.06	□□□□□ -0.64
PPP6R3-223	ENST00000531432	ATP11A	P98196	1134 aa		11.06	□□□□□ -0.64
PPP6R3-223	ENST00000531432	CEP120	Q8N960	986 aa		11.06	□□□□□ -0.64
PPP6R3-223	ENST00000531432	PLD4	Q96BZ4	506 aa		11.06	□□□□□ -0.64
PPP6R3-223	ENST00000531432	CSRNP1	Q96S65	589 aa		11.06	□□□□□ -0.64
PPP6R3-223	ENST00000531432	JPH1	Q9HDC5	661 aa	Predicted RBP	11.06	□□□□□ -0.64
PPP6R3-223	ENST00000531432	CPNE3	O75131	537 aa	Known RBP	11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	RGS9	O75916	674 aa	Predicted RBP	11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	PLCB3	Q01970	1234 aa		11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	COL9A3	Q14050	684 aa	Predicted RBP	11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	TMCO4	Q5TGY1	634 aa		11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	LINC00114	Q6XXX2	140 aa		11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	RASSF4	Q9H2L5	321 aa		11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	CNTNAP5	Q8WYK1	1306 aa		11.05	□□□□□ -0.64
PPP6R3-223	ENST00000531432	ANKRD33B	A6NCL7	494 aa		11.04	□□□□□ -0.64
PPP6R3-223	ENST00000531432	FAM181B	A6NEQ2	426 aa		11.04	□□□□□ -0.64
PPP6R3-223	ENST00000531432	FMR1	Q06787	632 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
PPP6R3-223	ENST00000531432	GRIK5	Q16478	980 aa		11.04	□□□□□ -0.64
PPP6R3-223	ENST00000531432	SPACA7	Q96KW9	195 aa		11.04	□□□□□ -0.64
PPP6R3-223	ENST00000531432	LATS2	Q9NRM7	1088 aa		11.04	□□□□□ -0.64
PPP6R3-223	ENST00000531432	LILRB5	O75023	590 aa		11.03	□□□□□ -0.64
PPP6R3-223	ENST00000531432	TRPA1	O75762	1119 aa		11.03	□□□□□ -0.64
PPP6R3-223	ENST00000531432	AFF1	P51825	1210 aa	Known RBP	11.03	□□□□□ -0.64
PPP6R3-223	ENST00000531432	GALNT12	Q8IXK2	581 aa		11.03	□□□□□ -0.64
PPP6R3-223	ENST00000531432	RBSN	Q9H1K0	784 aa		11.03	□□□□□ -0.64
PPP6R3-223	ENST00000531432	DNAJC25	Q9H1X3	360 aa		11.03	□□□□□ -0.64
PPP6R3-223	ENST00000531432	PRDM6	Q9NQX0	595 aa		11.03	□□□□□ -0.64
PPP6R3-223	ENST00000531432	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.02	□□□□□ -0.65
PPP6R3-223	ENST00000531432	TTC9	Q92623	222 aa		11.02	□□□□□ -0.65
PPP6R3-223	ENST00000531432	MKL2	Q9ULH7	1088 aa		11.02	□□□□□ -0.65
PPP6R3-223	ENST00000531432	PNMA6F	A0A0J9YX94	578 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	NFKBIE	O00221	500 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	P4HB	P07237	508 aa	Known RBP	11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	EDN3	P14138	238 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	NID1	P14543	1247 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	MAPK8	P45983	427 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	ENOX2	Q16206	610 aa	Known RBP	11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	ADAMTSL4	Q6UY14	1074 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	TRIM11	Q96F44	468 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	HHIP	Q96QV1	700 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	PBX4	Q9BYU1	374 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	DZANK1	Q9NVP4	752 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	TRIM33	Q9UPN9	1127 aa		11.01	□□□□□ -0.65
PPP6R3-223	ENST00000531432	CEP135	Q66GS9	1140 aa		11	□□□□□ -0.65
PPP6R3-223	ENST00000531432	NPAS4	Q8IUM7	802 aa		11	□□□□□ -0.65
PPP6R3-223	ENST00000531432	CCDC74A	Q96AQ1	378 aa		11	□□□□□ -0.65
PPP6R3-223	ENST00000531432	SETDB2	Q96T68	719 aa		11	□□□□□ -0.65
PPP6R3-223	ENST00000531432	ZKSCAN3	Q9BRR0	538 aa		11	□□□□□ -0.65
PPP6R3-223	ENST00000531432	NPHS2	Q9NP85	383 aa		11	□□□□□ -0.65
PPP6R3-223	ENST00000531432	PODN	Q7Z5L7	613 aa		10.99	□□□□□ -0.65
PPP6R3-223	ENST00000531432	OSMR	Q99650	979 aa		10.99	□□□□□ -0.65
PPP6R3-223	ENST00000531432		A0A1W2PP55	124 aa		10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	IRS1	P35568	1242 aa		10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	MFAP1	P55081	439 aa	Known RBP	10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	GDF6	Q6KF10	455 aa	Predicted RBP	10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	BEND7	Q8N7W2	519 aa	Predicted RBP	10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms