RNA–Protein interactions for RNA: ENST00000528847.1

RPS3-211, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-211ENST00000528847 KIF4BQ2VIQ3 1234 aa13.35□□□□□ -0.27
RPS3-211ENST00000528847 MOB2Q70IA6 237 aa13.35□□□□□ -0.27
RPS3-211ENST00000528847 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
RPS3-211ENST00000528847 SULF1Q8IWU6 871 aa13.35□□□□□ -0.27
RPS3-211ENST00000528847 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
RPS3-211ENST00000528847 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
RPS3-211ENST00000528847 CENPFP49454 3210 aa13.34□□□□□ -0.27
RPS3-211ENST00000528847 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
RPS3-211ENST00000528847 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
RPS3-211ENST00000528847 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
RPS3-211ENST00000528847 SCAF8Q9UPN6 1271 aaKnown RBP13.34□□□□□ -0.27
RPS3-211ENST00000528847 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
RPS3-211ENST00000528847 SCARF1Q14162 830 aa13.33□□□□□ -0.28
RPS3-211ENST00000528847 PKN2Q16513 984 aaKnown RBP13.33□□□□□ -0.28
RPS3-211ENST00000528847 ANGEL2Q5VTE6 544 aaKnown RBP13.33□□□□□ -0.28
RPS3-211ENST00000528847 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
RPS3-211ENST00000528847 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.28
RPS3-211ENST00000528847 HTTP42858 3142 aa13.33□□□□□ -0.28
RPS3-211ENST00000528847 SH3TC1Q8TE82 1336 aa13.33□□□□□ -0.28
RPS3-211ENST00000528847 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
RPS3-211ENST00000528847 HSP90AB3PQ58FF7 597 aa13.32□□□□□ -0.28
RPS3-211ENST00000528847 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
RPS3-211ENST00000528847 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
RPS3-211ENST00000528847 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
RPS3-211ENST00000528847 UBE2Q2LH0YL09 131 aa13.31□□□□□ -0.28
RPS3-211ENST00000528847 HABP4Q5JVS0 413 aaKnown RBP13.31□□□□□ -0.28
RPS3-211ENST00000528847 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
RPS3-211ENST00000528847 FAM89AQ96GI7 184 aa13.31□□□□□ -0.28
RPS3-211ENST00000528847 R3HDMLQ9H3Y0 253 aa13.31□□□□□ -0.28
RPS3-211ENST00000528847 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
RPS3-211ENST00000528847 GPR25O00155 361 aa13.3□□□□□ -0.28
RPS3-211ENST00000528847 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
RPS3-211ENST00000528847 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
RPS3-211ENST00000528847 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
RPS3-211ENST00000528847 PSME4Q14997 1843 aa13.29□□□□□ -0.28
RPS3-211ENST00000528847 NEFMP07197 916 aa13.29□□□□□ -0.28
RPS3-211ENST00000528847 TM4SF4P48230 202 aa13.29□□□□□ -0.28
RPS3-211ENST00000528847 FKBP1BP68106 108 aa13.29□□□□□ -0.28
RPS3-211ENST00000528847 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
RPS3-211ENST00000528847 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
RPS3-211ENST00000528847 FBXO46Q6PJ61 603 aaPredicted RBP13.29□□□□□ -0.28
RPS3-211ENST00000528847 EYA3Q99504 573 aa13.29□□□□□ -0.28
RPS3-211ENST00000528847 ZC3H12CQ9C0D7 883 aaKnown RBP13.29□□□□□ -0.28
RPS3-211ENST00000528847 BRCA2P51587 3418 aa13.28□□□□□ -0.28
RPS3-211ENST00000528847 ATP5J2-PTCD1G3V325 749 aa13.28□□□□□ -0.28
RPS3-211ENST00000528847 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
RPS3-211ENST00000528847 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
RPS3-211ENST00000528847 GCC1Q96CN9 775 aa13.28□□□□□ -0.28
RPS3-211ENST00000528847 GMLQ99445 158 aa13.28□□□□□ -0.28
RPS3-211ENST00000528847 KRT24Q2M2I5 525 aa13.27□□□□□ -0.29
RPS3-211ENST00000528847 ISCA1Q9BUE6 129 aa13.27□□□□□ -0.29
RPS3-211ENST00000528847 MYOZ2Q9NPC6 264 aa13.27□□□□□ -0.29
RPS3-211ENST00000528847 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
RPS3-211ENST00000528847 KIAA0100Q14667 2235 aaKnown RBP13.27□□□□□ -0.29
RPS3-211ENST00000528847 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
RPS3-211ENST00000528847 G3V3G9 751 aa13.26□□□□□ -0.29
RPS3-211ENST00000528847 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
RPS3-211ENST00000528847 NOM1Q5C9Z4 860 aaKnown RBP13.26□□□□□ -0.29
RPS3-211ENST00000528847 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
RPS3-211ENST00000528847 AGBL3Q8NEM8 1001 aa13.26□□□□□ -0.29
RPS3-211ENST00000528847 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
RPS3-211ENST00000528847 PITPNM2Q9BZ72 1349 aa13.25□□□□□ -0.29
RPS3-211ENST00000528847 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
RPS3-211ENST00000528847 FKTNO75072 461 aa13.25□□□□□ -0.29
RPS3-211ENST00000528847 UFL1O94874 794 aa13.25□□□□□ -0.29
RPS3-211ENST00000528847 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
RPS3-211ENST00000528847 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
RPS3-211ENST00000528847 PLBD2Q8NHP8 589 aa13.25□□□□□ -0.29
RPS3-211ENST00000528847 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
RPS3-211ENST00000528847 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
RPS3-211ENST00000528847 RIPK4P57078 832 aa13.24□□□□□ -0.29
RPS3-211ENST00000528847 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
RPS3-211ENST00000528847 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
RPS3-211ENST00000528847 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
RPS3-211ENST00000528847 SZT2Q5T011 3432 aa13.23□□□□□ -0.29
RPS3-211ENST00000528847 ZNF609O15014 1411 aa13.23□□□□□ -0.29
RPS3-211ENST00000528847 ZNF646O15015 1829 aaPredicted RBP13.23□□□□□ -0.29
RPS3-211ENST00000528847 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
RPS3-211ENST00000528847 MXD3Q9BW11 206 aa13.23□□□□□ -0.29
RPS3-211ENST00000528847 CFHR5Q9BXR6 569 aa13.23□□□□□ -0.29
RPS3-211ENST00000528847 GGA1Q9UJY5 639 aa13.23□□□□□ -0.29
RPS3-211ENST00000528847 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
RPS3-211ENST00000528847 FXR1P51114 621 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPS3-211ENST00000528847 PRKG1Q13976 671 aa13.22□□□□□ -0.29
RPS3-211ENST00000528847 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
RPS3-211ENST00000528847 FZD1Q9UP38 647 aa13.22□□□□□ -0.29
RPS3-211ENST00000528847 USP17L3A6NCW0 530 aa13.21□□□□□ -0.29
RPS3-211ENST00000528847 USP17L4A6NCW7 530 aa13.21□□□□□ -0.29
RPS3-211ENST00000528847 SREBF2Q12772 1141 aa13.21□□□□□ -0.29
RPS3-211ENST00000528847 USP17L1Q7RTZ2 530 aa13.21□□□□□ -0.29
RPS3-211ENST00000528847 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
RPS3-211ENST00000528847 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
RPS3-211ENST00000528847 CEP290O15078 2479 aa13.2□□□□□ -0.3
RPS3-211ENST00000528847 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
RPS3-211ENST00000528847 WNT10BO00744 389 aa13.2□□□□□ -0.3
RPS3-211ENST00000528847 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
RPS3-211ENST00000528847 SPRYD7Q5W111 196 aa13.2□□□□□ -0.3
RPS3-211ENST00000528847 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
RPS3-211ENST00000528847 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
RPS3-211ENST00000528847 CHL1O00533 1208 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms