RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-204	ENST00000527906	ZBTB40	Q9NUA8	1239 aa		13.67	□□□□□ -0.22
PSMC3-204	ENST00000527906	LAMB2	P55268	1798 aa		13.67	□□□□□ -0.22
PSMC3-204	ENST00000527906	CASP8AP2	Q9UKL3	1982 aa		13.67	□□□□□ -0.22
PSMC3-204	ENST00000527906	CDHR2	Q9BYE9	1310 aa		13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	RIC1	Q4ADV7	1423 aa		13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	ATP5J2-PTCD1	G3V325	749 aa		13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906		H7C1W4	665 aa		13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	FZD9	O00144	591 aa		13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	CST9	Q5W186	159 aa		13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	NYX	Q9GZU5	481 aa		13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMC3-204	ENST00000527906	UBTFL1	P0CB47	393 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMC3-204	ENST00000527906	GPT	P24298	496 aa		13.65	□□□□□ -0.22
PSMC3-204	ENST00000527906	GPC2	Q8N158	579 aa		13.65	□□□□□ -0.22
PSMC3-204	ENST00000527906	CNBD1	Q8NA66	436 aa		13.65	□□□□□ -0.22
PSMC3-204	ENST00000527906	MEIS3	Q99687	375 aa		13.65	□□□□□ -0.22
PSMC3-204	ENST00000527906	TRAF5	O00463	557 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	NPHP1	O15259	732 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	NTSR2	O95665	410 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	CASP7	P55210	303 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	ST5	P78524	1137 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	EXOC6	Q8TAG9	804 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	UTP14A	Q9BVJ6	771 aa	Known RBP	13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	PLA2G12B	Q9BX93	195 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	SH3TC1	Q8TE82	1336 aa		13.64	□□□□□ -0.23
PSMC3-204	ENST00000527906	GNAI2	P04899	355 aa		13.63	□□□□□ -0.23
PSMC3-204	ENST00000527906	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMC3-204	ENST00000527906	SUSD4	Q5VX71	490 aa		13.63	□□□□□ -0.23
PSMC3-204	ENST00000527906	TPTE2	Q6XPS3	522 aa		13.63	□□□□□ -0.23
PSMC3-204	ENST00000527906	UBE3B	Q7Z3V4	1068 aa		13.63	□□□□□ -0.23
PSMC3-204	ENST00000527906	TRMT112	Q9UI30	125 aa	Known RBP	13.63	□□□□□ -0.23
PSMC3-204	ENST00000527906	CACNA1S	Q13698	1873 aa		13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	LMOD1	P29536	600 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	IARS	P41252	1262 aa	Known RBP	13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	IRX6	P78412	446 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	MTX1	Q13505	466 aa		13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	SLC10A5	Q5PT55	438 aa		13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	OLFM4	Q6UX06	510 aa		13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	SAPCD2	Q86UD0	394 aa		13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	RTKN2	Q8IZC4	609 aa		13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	MYH3	P11055	1940 aa		13.62	□□□□□ -0.23
PSMC3-204	ENST00000527906	DDX60	Q8IY21	1712 aa	Known RBP	13.61	□□□□□ -0.23
PSMC3-204	ENST00000527906	RABL6	Q3YEC7	729 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC3-204	ENST00000527906	CIAPIN1	Q6FI81	312 aa		13.61	□□□□□ -0.23
PSMC3-204	ENST00000527906	GJA3	Q9Y6H8	435 aa		13.61	□□□□□ -0.23
PSMC3-204	ENST00000527906	NPR1	P16066	1061 aa		13.6	□□□□□ -0.23
PSMC3-204	ENST00000527906	EPS15	P42566	896 aa		13.6	□□□□□ -0.23
PSMC3-204	ENST00000527906	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC3-204	ENST00000527906	SYNE4	Q8N205	404 aa		13.6	□□□□□ -0.23
PSMC3-204	ENST00000527906	FAM89A	Q96GI7	184 aa		13.6	□□□□□ -0.23
PSMC3-204	ENST00000527906	LRRFIP2	Q9Y608	721 aa	Known RBP	13.6	□□□□□ -0.23
PSMC3-204	ENST00000527906	RTL9	Q8NET4	1388 aa		13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	IRS4	O14654	1257 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	PDE8A	O60658	829 aa		13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	CELF2	O95319	508 aa	Known RBP	13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	SCNN1D	P51172	638 aa		13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	EIF6	P56537	245 aa	Known RBP	13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	USP50	Q70EL3	339 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	JDP2	Q8WYK2	163 aa		13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	KAZALD1	Q96I82	304 aa		13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	HHIPL1	Q96JK4	782 aa		13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	TRPM7	Q96QT4	1865 aa		13.59	□□□□□ -0.23
PSMC3-204	ENST00000527906	ANKRD44	Q8N8A2	993 aa		13.58	□□□□□ -0.24
PSMC3-204	ENST00000527906	SUCLG2	Q96I99	432 aa		13.58	□□□□□ -0.24
PSMC3-204	ENST00000527906	ABCC12	Q96J65	1359 aa		13.58	□□□□□ -0.24
PSMC3-204	ENST00000527906	HMMR	O75330	724 aa		13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	CSF1R	P07333	972 aa		13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	GTF2E1	P29083	439 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	CTSW	P56202	376 aa		13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	FOXO4	P98177	505 aa		13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	HDAC1	Q13547	482 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	CEP85	Q6P2H3	762 aa		13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	ZIC5	Q96T25	663 aa		13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	BICC1	Q9H694	974 aa	Known RBP	13.57	□□□□□ -0.24
PSMC3-204	ENST00000527906	KLRG2	A4D1S0	409 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	ATP8B2	P98198	1209 aa		13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	NOG	Q13253	232 aa		13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	SF3B3	Q15393	1217 aa	Known RBP	13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	NUTM1	Q86Y26	1132 aa		13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	SSH3	Q8TE77	659 aa		13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	PSMD1	Q99460	953 aa		13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	PPP4R2	Q9NY27	417 aa		13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	PCDHB15	Q9Y5E8	787 aa		13.56	□□□□□ -0.24
PSMC3-204	ENST00000527906	POLA2	Q14181	598 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	CRY2	Q49AN0	593 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	CCDC152	Q4G0S7	254 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	EPHA10	Q5JZY3	1008 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	TTLL11	Q8NHH1	800 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	GCC1	Q96CN9	775 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	C1orf115	Q9H7X2	142 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	COL4A5	P29400	1685 aa		13.55	□□□□□ -0.24
PSMC3-204	ENST00000527906	FAM177B	A6PVY3	158 aa		13.54	□□□□□ -0.24
PSMC3-204	ENST00000527906	HCLS1	P14317	486 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-204	ENST00000527906	RTL5	Q5HYW3	569 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-204	ENST00000527906	LMBR1L	Q6UX01	489 aa		13.54	□□□□□ -0.24
PSMC3-204	ENST00000527906	JARID2	Q92833	1246 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-204	ENST00000527906	NLRP3	Q96P20	1036 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms