RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PIGBQ92521 554 aa20.9■□□□□ 0.94
USH1C-205ENST00000527020 HELLSQ9NRZ9 838 aa20.9■□□□□ 0.94
USH1C-205ENST00000527020 PDIA4P13667 645 aaKnown RBP20.89■□□□□ 0.94
USH1C-205ENST00000527020 ZMYM1Q5SVZ6 1142 aa20.89■□□□□ 0.94
USH1C-205ENST00000527020 DNAJC10Q8IXB1 793 aa20.89■□□□□ 0.94
USH1C-205ENST00000527020 GTF3C6Q969F1 213 aa20.89■□□□□ 0.94
USH1C-205ENST00000527020 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.89■□□□□ 0.94
USH1C-205ENST00000527020 PDCP20941 246 aa20.89■□□□□ 0.93
USH1C-205ENST00000527020 TRIM28Q13263 835 aaKnown RBP20.89■□□□□ 0.93
USH1C-205ENST00000527020 CSPP1Q1MSJ5 1256 aa20.89■□□□□ 0.93
USH1C-205ENST00000527020 Q6ZUG5 572 aa20.89■□□□□ 0.93
USH1C-205ENST00000527020 FERMT3Q86UX7 667 aa20.88■□□□□ 0.93
USH1C-205ENST00000527020 TICAM2Q86XR7 235 aa20.88■□□□□ 0.93
USH1C-205ENST00000527020 FAM173BQ6P4H8 233 aa20.87■□□□□ 0.93
USH1C-205ENST00000527020 TTC6Q86TZ1 520 aa20.87■□□□□ 0.93
USH1C-205ENST00000527020 JAK2O60674 1132 aa20.87■□□□□ 0.93
USH1C-205ENST00000527020 IFIT1P09914 478 aaKnown RBP20.87■□□□□ 0.93
USH1C-205ENST00000527020 VSIG10Q8N0Z9 540 aa20.87■□□□□ 0.93
USH1C-205ENST00000527020 DSCC1Q9BVC3 393 aa20.87■□□□□ 0.93
USH1C-205ENST00000527020 LETM1O95202 739 aaPredicted RBP20.86■□□□□ 0.93
USH1C-205ENST00000527020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.86■□□□□ 0.93
USH1C-205ENST00000527020 FUCA2Q9BTY2 467 aa20.86■□□□□ 0.93
USH1C-205ENST00000527020 NOL7Q9UMY1 257 aaKnown RBP20.86■□□□□ 0.93
USH1C-205ENST00000527020 ZNF330Q9Y3S2 320 aaPredicted RBP20.86■□□□□ 0.93
USH1C-205ENST00000527020 MAST3O60307 1309 aa20.86■□□□□ 0.93
USH1C-205ENST00000527020 A0A0G2JLW4 131 aa20.86■□□□□ 0.93
USH1C-205ENST00000527020 PCCAP05165 728 aaPredicted RBP20.86■□□□□ 0.93
USH1C-205ENST00000527020 PLA2G12BQ9BX93 195 aa20.86■□□□□ 0.93
USH1C-205ENST00000527020 ANKRD36CQ5JPF3 1778 aa20.86■□□□□ 0.93
USH1C-205ENST00000527020 CCDC57Q2TAC2 916 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 FAM89AQ96GI7 184 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 LRRC2Q9BYS8 371 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 CEP126Q9P2H0 1117 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 NWD2Q9ULI1 1742 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 RNF113AO15541 343 aaKnown RBP20.85■□□□□ 0.93
USH1C-205ENST00000527020 CSF1RP07333 972 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 HSPD1P10809 573 aaKnown RBP20.85■□□□□ 0.93
USH1C-205ENST00000527020 ADORA1P30542 326 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 KRT85P78386 507 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 FAM184AQ8NB25 1140 aa20.85■□□□□ 0.93
USH1C-205ENST00000527020 DISP2A7MBM2 1401 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 ELP1O95163 1332 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 MYH3P11055 1940 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 MYH7P12883 1935 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 BRF1Q92994 677 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
USH1C-205ENST00000527020 FBXO3Q9UK99 471 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 MYH15Q9Y2K3 1946 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 LRP6O75581 1613 aa20.84■□□□□ 0.93
USH1C-205ENST00000527020 M0R2C6 588 aa20.83■□□□□ 0.93
USH1C-205ENST00000527020 KIF6Q6ZMV9 814 aa20.83■□□□□ 0.93
USH1C-205ENST00000527020 BTG4Q9NY30 223 aa20.83■□□□□ 0.93
USH1C-205ENST00000527020 MSNP26038 577 aaKnown RBP20.83■□□□□ 0.92
USH1C-205ENST00000527020 EXOSC10Q01780 885 aaKnown RBP20.83■□□□□ 0.92
USH1C-205ENST00000527020 SCRN1Q12765 414 aa20.83■□□□□ 0.92
USH1C-205ENST00000527020 UVSSAQ2YD98 709 aa20.83■□□□□ 0.92
USH1C-205ENST00000527020 GIMAP6Q6P9H5 292 aa20.83■□□□□ 0.92
USH1C-205ENST00000527020 DHX32Q7L7V1 743 aaKnown RBP20.83■□□□□ 0.92
USH1C-205ENST00000527020 ZBTB38Q8NAP3 1195 aaPredicted RBP20.83■□□□□ 0.92
USH1C-205ENST00000527020 NAP1L5Q96NT1 182 aaPredicted RBP20.83■□□□□ 0.92
USH1C-205ENST00000527020 CCDC85AQ96PX6 553 aaPredicted RBP20.83■□□□□ 0.92
USH1C-205ENST00000527020 MAP3K15Q6ZN16 1313 aa20.83■□□□□ 0.92
USH1C-205ENST00000527020 RIC1Q4ADV7 1423 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 HCLS1P14317 486 aaPredicted RBP20.82■□□□□ 0.92
USH1C-205ENST00000527020 SYNE4Q8N205 404 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 XAGE2Q96GT9 111 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 SLC4A9Q96Q91 983 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 AGXT2Q9BYV1 514 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 NUP98P52948 1817 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 AKAP11Q9UKA4 1901 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 HMGB1P09429 215 aaKnown RBP20.82■□□□□ 0.92
USH1C-205ENST00000527020 HLFQ16534 295 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 GIGYF2Q6Y7W6 1299 aaKnown RBP20.82■□□□□ 0.92
USH1C-205ENST00000527020 KLHL34Q8N239 644 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 OSBP2Q969R2 916 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 KAT6BQ8WYB5 2073 aa20.82■□□□□ 0.92
USH1C-205ENST00000527020 KDM4FA0A1W2PPD8 638 aa20.81■□□□□ 0.92
USH1C-205ENST00000527020 PFKFB2O60825 505 aa20.81■□□□□ 0.92
USH1C-205ENST00000527020 HSP90B1P14625 803 aaKnown RBP20.81■□□□□ 0.92
USH1C-205ENST00000527020 SMARCC2Q8TAQ2 1214 aa20.81■□□□□ 0.92
USH1C-205ENST00000527020 ZKSCAN5Q9Y2L8 839 aa20.81■□□□□ 0.92
USH1C-205ENST00000527020 BCL9O00512 1426 aa20.81■□□□□ 0.92
USH1C-205ENST00000527020 COL14A1Q05707 1796 aaKnown RBP20.81■□□□□ 0.92
USH1C-205ENST00000527020 E7EWF7 191 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 STARD3NLO95772 234 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 SCARF1Q14162 830 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 PLCH1Q4KWH8 1693 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 FOXP2O15409 715 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
USH1C-205ENST00000527020 RESTQ13127 1097 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 CCDC39Q9UFE4 941 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 AKAP2Q9Y2D5 859 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 CDHR2Q9BYE9 1310 aa20.8■□□□□ 0.92
USH1C-205ENST00000527020 ZNF500O60304 480 aaPredicted RBP20.79■□□□□ 0.92
USH1C-205ENST00000527020 TFIP11Q9UBB9 837 aaKnown RBP20.79■□□□□ 0.92
USH1C-205ENST00000527020 WNK3Q9BYP7 1800 aa20.79■□□□□ 0.92
USH1C-205ENST00000527020 CTDNEP1O95476 244 aa20.79■□□□□ 0.92
USH1C-205ENST00000527020 LIG1P18858 919 aa20.79■□□□□ 0.92
USH1C-205ENST00000527020 CCDC158Q5M9N0 1113 aa20.79■□□□□ 0.92
USH1C-205ENST00000527020 TTC39AQ5SRH9 613 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms