RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 HELBQ8NG08 1087 aaPredicted RBP11.62□□□□□ -0.55
USP35-201ENST00000526425 ASAP1Q9ULH1 1129 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 LIMCH1Q9UPQ0 1083 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 SASH1O94885 1247 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 OSBPL3Q9H4L5 887 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 OVOS2A0A0G2JMS6 1433 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 AK9Q5TCS8 1911 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 FAM98CQ17RN3 349 aaKnown RBP11.61□□□□□ -0.55
USP35-201ENST00000526425 PI4K2BQ8TCG2 481 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 ZNF592Q92610 1267 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 SYAP1Q96A49 352 aaPredicted RBP11.61□□□□□ -0.55
USP35-201ENST00000526425 KDM6AO15550 1401 aaPredicted RBP11.61□□□□□ -0.55
USP35-201ENST00000526425 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 ADCK5Q3MIX3 580 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 METTL24Q5JXM2 366 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 MYRIPQ8NFW9 859 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 TFIP11Q9UBB9 837 aaKnown RBP11.61□□□□□ -0.55
USP35-201ENST00000526425 TRMT112Q9UI30 125 aaKnown RBP11.61□□□□□ -0.55
USP35-201ENST00000526425 CAMTA1Q9Y6Y1 1673 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 WDR33Q9C0J8 1336 aaKnown RBP11.61□□□□□ -0.55
USP35-201ENST00000526425 PSMA5P28066 241 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 GJB2P29033 226 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 GYS2P54840 703 aa11.61□□□□□ -0.55
USP35-201ENST00000526425 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
USP35-201ENST00000526425 HIP1O00291 1037 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
USP35-201ENST00000526425 GUCY1B3Q02153 619 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 POLA2Q14181 598 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 CCT2P78371 535 aaKnown RBP11.6□□□□□ -0.55
USP35-201ENST00000526425 SART3Q15020 963 aaKnown RBP11.6□□□□□ -0.55
USP35-201ENST00000526425 AXDND1Q5T1B0 1012 aaPredicted RBP11.6□□□□□ -0.55
USP35-201ENST00000526425 CCDC39Q9UFE4 941 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 STAP2Q9UGK3 403 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 CNPY2Q9Y2B0 182 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
USP35-201ENST00000526425 CCDC158Q5M9N0 1113 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 PLBD2Q8NHP8 589 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 PIGBQ92521 554 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 TRPM3Q9HCF6 1732 aaPredicted RBP11.59□□□□□ -0.55
USP35-201ENST00000526425 IFIT5Q13325 482 aaKnown RBP11.59□□□□□ -0.55
USP35-201ENST00000526425 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 TTC41PQ6P2S7 1318 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 LRRC24Q50LG9 513 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 BICD2Q8TD16 824 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 PLCD4Q9BRC7 762 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
USP35-201ENST00000526425 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
USP35-201ENST00000526425 E2F4Q16254 413 aa11.58□□□□□ -0.55
USP35-201ENST00000526425 SYNE4Q8N205 404 aa11.58□□□□□ -0.55
USP35-201ENST00000526425 PUS3Q9BZE2 481 aaKnown RBP11.58□□□□□ -0.55
USP35-201ENST00000526425 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.55
USP35-201ENST00000526425 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.55
USP35-201ENST00000526425 IQSEC3Q9UPP2 1182 aaPredicted RBP11.58□□□□□ -0.55
USP35-201ENST00000526425 RAD50Q92878 1312 aa11.58□□□□□ -0.56
USP35-201ENST00000526425 GOLGA6L6A8MZA4 724 aa11.58□□□□□ -0.56
USP35-201ENST00000526425 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
USP35-201ENST00000526425 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
USP35-201ENST00000526425 HSPA4P34932 840 aa11.58□□□□□ -0.56
USP35-201ENST00000526425 SKIDA1Q1XH10 827 aa11.58□□□□□ -0.56
USP35-201ENST00000526425 ZSCAN23Q3MJ62 389 aa11.58□□□□□ -0.56
USP35-201ENST00000526425 ATP6V1DQ9Y5K8 247 aa11.58□□□□□ -0.56
USP35-201ENST00000526425 STX6O43752 255 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 ATP6V1AP38606 617 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 PSEN1P49768 467 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 DBNLQ9UJU6 430 aaKnown RBP11.57□□□□□ -0.56
USP35-201ENST00000526425 TDO2P48775 406 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 KCNQ4P56696 695 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 ANAPC15P60006 121 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 CAMK4Q16566 473 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 KLHL40Q2TBA0 621 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
USP35-201ENST00000526425 RRP12Q5JTH9 1297 aaKnown RBP11.57□□□□□ -0.56
USP35-201ENST00000526425 DRC7Q8IY82 874 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 RBSNQ9H1K0 784 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.57□□□□□ -0.56
USP35-201ENST00000526425 USP21Q9UK80 565 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 V9GYY5 206 aaPredicted RBP11.57□□□□□ -0.56
USP35-201ENST00000526425 ALS2Q96Q42 1657 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 BRF1Q92994 677 aa11.57□□□□□ -0.56
USP35-201ENST00000526425 NKX1-1Q15270 411 aaPredicted RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 ZNF589Q86UQ0 364 aaPredicted RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 USP48Q86UV5 1035 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 MYCBPQ99417 103 aaPredicted RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 LSG1Q9H089 658 aaKnown RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 ZNF500O60304 480 aaPredicted RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 GADD45BO75293 160 aaPredicted RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 LARGE1O95461 756 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 PDIA6Q15084 440 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 PPP1R9BQ96SB3 815 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 NBPF26B4DH59 902 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 CPLX1O14810 134 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 NBPF14Q5TI25 921 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 NBPF10Q6P3W6 841 aaKnown RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 RALYLQ86SE5 291 aaKnown RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 NBPF15Q8N660 670 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms