RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ZC3H12CQ9C0D7 883 aaKnown RBP6.75□□□□□ -1.33
HMGB1P40-201ENST00000525121 USP44Q9H0E7 712 aa6.75□□□□□ -1.33
HMGB1P40-201ENST00000525121 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
HMGB1P40-201ENST00000525121 SNED1Q8TER0 1413 aa6.75□□□□□ -1.33
HMGB1P40-201ENST00000525121 TIAM2Q8IVF5 1701 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 IQCA1LA6NCM1 817 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 GLTPD2A6NH11 291 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 GNAI2P04899 355 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 LMOD1P29536 600 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 TNIP1Q15025 636 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 RABL6Q3YEC7 729 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 EPHA10Q5JZY3 1008 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 TMEM57Q8N5G2 664 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 TBC1D16Q8TBP0 767 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 MEIS3Q99687 375 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 ZNRF3Q9ULT6 936 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 MINPP1Q9UNW1 487 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 LEMD3Q9Y2U8 911 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 LRRFIP2Q9Y608 721 aaKnown RBP6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 FER1L6Q2WGJ9 1857 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 MROH5Q6ZUA9 1318 aa6.74□□□□□ -1.33
HMGB1P40-201ENST00000525121 LRRC37AA6NMS7 1700 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 RIMBP2O15034 1052 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 PLIN1O60240 522 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 PRELPP51888 382 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 CHRNDQ07001 517 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 METTL24Q5JXM2 366 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 GPC2Q8N158 579 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 ANKRD44Q8N8A2 993 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 ZNF804BA4D1E1 1349 aa6.73□□□□□ -1.33
HMGB1P40-201ENST00000525121 MYH3P11055 1940 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 MED23Q9ULK4 1368 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 FZD9O00144 591 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 SRGAP3O43295 1099 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 ECE2O60344 883 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 CIAPIN1Q6FI81 312 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 ZNF804AQ7Z570 1209 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 SLC51AQ86UW1 340 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 KAZALD1Q96I82 304 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 ZNF594Q96JF6 807 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 DBNDD1Q9H9R9 158 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 RRAGCQ9HB90 399 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 NMRK2Q9NPI5 230 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 POLLQ9UGP5 575 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 FBXO3Q9UK99 471 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 DDX19BQ9UMR2 479 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 TNNQ9UQP3 1299 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 DUOX1Q9NRD9 1551 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 ZNF541Q9H0D2 1346 aa6.72□□□□□ -1.33
HMGB1P40-201ENST00000525121 EYA2O00167 538 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 RAD17O75943 681 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 CIAO1O76071 339 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 DDNO94850 711 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 OS9Q13438 667 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 PDE3AQ14432 1141 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 MVPQ14764 893 aaKnown RBP6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 DOK7Q18PE1 504 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 PODNQ7Z5L7 613 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 VPS37DQ86XT2 251 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 HELBQ8NG08 1087 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 PANK1Q8TE04 598 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 FBXW7Q969H0 707 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 L3MBTL3Q96JM7 780 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 GPR101Q96P66 508 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 COA1Q9GZY4 146 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 SIL1Q9H173 461 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 HACL1Q9UJ83 578 aa6.71□□□□□ -1.34
HMGB1P40-201ENST00000525121 H7C1D1 291 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 HMMRO75330 724 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 FRAT2O75474 233 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 TAF5LO75529 589 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 TOMM70O94826 608 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 IFIT1P09914 478 aaKnown RBP6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 RLBP1P12271 317 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 SLC5A1P13866 664 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 RPS12P25398 132 aaKnown RBP6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 IL15P40933 162 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 CXCL9Q07325 125 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 MTX1Q13505 466 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 UBE4AQ14139 1066 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 PUM3Q15397 648 aaKnown RBP6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 CAVIN4Q5BKX8 364 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 PNMA8AQ86V59 439 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 CEP126Q9P2H0 1117 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 COG6Q9Y2V7 657 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 COL4A1P02462 1669 aa6.7□□□□□ -1.34
HMGB1P40-201ENST00000525121 SBF1O95248 1867 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 USP17L3A6NCW0 530 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 USP17L4A6NCW7 530 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 KIF3CO14782 793 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 ZBTB7BO15156 539 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 PDE8BO95263 885 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 EPHX2P34913 555 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 GMPSP49915 693 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 RRP1P56182 461 aaKnown RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 G3BP1Q13283 466 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 LRRC24Q50LG9 513 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms