RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 SCN9AQ15858 1988 aa19.2■□□□□ 0.66
CSTF3-204ENST00000524556 HOXB7P09629 217 aa19.19■□□□□ 0.66
CSTF3-204ENST00000524556 ZNF157P51786 506 aaPredicted RBP19.19■□□□□ 0.66
CSTF3-204ENST00000524556 KIF23Q02241 960 aaPredicted RBP19.19■□□□□ 0.66
CSTF3-204ENST00000524556 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
CSTF3-204ENST00000524556 TBC1D16Q8TBP0 767 aa19.19■□□□□ 0.66
CSTF3-204ENST00000524556 DBF4Q9UBU7 674 aaPredicted RBP19.19■□□□□ 0.66
CSTF3-204ENST00000524556 VIL1P09327 827 aaKnown RBP19.18■□□□□ 0.66
CSTF3-204ENST00000524556 RPS8P62241 208 aaKnown RBP19.18■□□□□ 0.66
CSTF3-204ENST00000524556 TRIM28Q13263 835 aaKnown RBP19.18■□□□□ 0.66
CSTF3-204ENST00000524556 RALBP1Q15311 655 aa19.18■□□□□ 0.66
CSTF3-204ENST00000524556 TRIM35Q9UPQ4 493 aa19.18■□□□□ 0.66
CSTF3-204ENST00000524556 PDE4DIPQ5VU43 2346 aa19.17■□□□□ 0.66
CSTF3-204ENST00000524556 IRS4O14654 1257 aaPredicted RBP19.17■□□□□ 0.66
CSTF3-204ENST00000524556 KIF4BQ2VIQ3 1234 aa19.17■□□□□ 0.66
CSTF3-204ENST00000524556 RTL5Q5HYW3 569 aaPredicted RBP19.17■□□□□ 0.66
CSTF3-204ENST00000524556 CCDC146Q8IYE0 955 aa19.17■□□□□ 0.66
CSTF3-204ENST00000524556 ZC3H12CQ9C0D7 883 aaKnown RBP19.17■□□□□ 0.66
CSTF3-204ENST00000524556 RNF186Q9NXI6 227 aa19.17■□□□□ 0.66
CSTF3-204ENST00000524556 TRPA1O75762 1119 aa19.16■□□□□ 0.66
CSTF3-204ENST00000524556 SULF1Q8IWU6 871 aa19.16■□□□□ 0.66
CSTF3-204ENST00000524556 HYPKQ9NX55 129 aa19.16■□□□□ 0.66
CSTF3-204ENST00000524556 PODXL2Q9NZ53 605 aa19.16■□□□□ 0.66
CSTF3-204ENST00000524556 SLC10A3P09131 477 aa19.15■□□□□ 0.66
CSTF3-204ENST00000524556 CSRNP1Q96S65 589 aa19.15■□□□□ 0.66
CSTF3-204ENST00000524556 GGA3Q9NZ52 723 aa19.15■□□□□ 0.66
CSTF3-204ENST00000524556 ASTN2O75129 1339 aaPredicted RBP19.15■□□□□ 0.66
CSTF3-204ENST00000524556 CDCA5Q96FF9 252 aa19.14■□□□□ 0.65
CSTF3-204ENST00000524556 PSME4Q14997 1843 aa19.14■□□□□ 0.65
CSTF3-204ENST00000524556 G3V3G9 751 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 UFL1O94874 794 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 ZNF280AP59817 542 aaPredicted RBP19.13■□□□□ 0.65
CSTF3-204ENST00000524556 DCAF8Q5TAQ9 597 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 ZBTB38Q8NAP3 1195 aaPredicted RBP19.13■□□□□ 0.65
CSTF3-204ENST00000524556 RUNDC1Q96C34 613 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 SEC31BQ9NQW1 1179 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 ANKIB1Q9P2G1 1089 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 GGA1Q9UJY5 639 aa19.13■□□□□ 0.65
CSTF3-204ENST00000524556 HSP90B1P14625 803 aaKnown RBP19.12■□□□□ 0.65
CSTF3-204ENST00000524556 SCARF1Q14162 830 aa19.12■□□□□ 0.65
CSTF3-204ENST00000524556 REM2Q8IYK8 340 aaPredicted RBP19.12■□□□□ 0.65
CSTF3-204ENST00000524556 AGBL3Q8NEM8 1001 aa19.12■□□□□ 0.65
CSTF3-204ENST00000524556 ZNF609O15014 1411 aa19.11■□□□□ 0.65
CSTF3-204ENST00000524556 RSBN1LQ6PCB5 846 aaPredicted RBP19.11■□□□□ 0.65
CSTF3-204ENST00000524556 RIC3Q7Z5B4 369 aa19.11■□□□□ 0.65
CSTF3-204ENST00000524556 ANGEL2Q5VTE6 544 aaKnown RBP19.1■□□□□ 0.65
CSTF3-204ENST00000524556 RASAL3Q86YV0 1011 aa19.1■□□□□ 0.65
CSTF3-204ENST00000524556 PCDH10Q9P2E7 1040 aa19.1■□□□□ 0.65
CSTF3-204ENST00000524556 SOX10P56693 466 aa19.09■□□□□ 0.65
CSTF3-204ENST00000524556 FKBP1BP68106 108 aa19.09■□□□□ 0.65
CSTF3-204ENST00000524556 GOLGA2Q08379 1002 aa19.09■□□□□ 0.65
CSTF3-204ENST00000524556 CCDC152Q4G0S7 254 aa19.09■□□□□ 0.65
CSTF3-204ENST00000524556 GMLQ99445 158 aa19.09■□□□□ 0.65
CSTF3-204ENST00000524556 MBIPQ9NS73 344 aa19.09■□□□□ 0.65
CSTF3-204ENST00000524556 MYBBP1AQ9BQG0 1328 aaKnown RBP19.08■□□□□ 0.65
CSTF3-204ENST00000524556 PCCAP05165 728 aaPredicted RBP19.08■□□□□ 0.64
CSTF3-204ENST00000524556 CTU1Q7Z7A3 348 aaKnown RBP19.08■□□□□ 0.64
CSTF3-204ENST00000524556 CCDC191Q8NCU4 936 aa19.08■□□□□ 0.64
CSTF3-204ENST00000524556 MYD88Q99836 296 aa19.08■□□□□ 0.64
CSTF3-204ENST00000524556 PHAXQ9H814 394 aaKnown RBP19.08■□□□□ 0.64
CSTF3-204ENST00000524556 PAPPA2Q9BXP8 1791 aa19.08■□□□□ 0.64
CSTF3-204ENST00000524556 PITPNM2Q9BZ72 1349 aa19.07■□□□□ 0.64
CSTF3-204ENST00000524556 PDE8AO60658 829 aa19.07■□□□□ 0.64
CSTF3-204ENST00000524556 USP17L8P0C7I0 530 aa19.07■□□□□ 0.64
CSTF3-204ENST00000524556 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
CSTF3-204ENST00000524556 MYOZ2Q9NPC6 264 aa19.07■□□□□ 0.64
CSTF3-204ENST00000524556 ADAMTS8Q9UP79 889 aa19.07■□□□□ 0.64
CSTF3-204ENST00000524556 XDHP47989 1333 aa19.06■□□□□ 0.64
CSTF3-204ENST00000524556 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
CSTF3-204ENST00000524556 PODNQ7Z5L7 613 aa19.06■□□□□ 0.64
CSTF3-204ENST00000524556 USP17L3A6NCW0 530 aa19.05■□□□□ 0.64
CSTF3-204ENST00000524556 USP17L4A6NCW7 530 aa19.05■□□□□ 0.64
CSTF3-204ENST00000524556 ATP2B4P23634 1241 aa19.05■□□□□ 0.64
CSTF3-204ENST00000524556 USP17L1Q7RTZ2 530 aa19.05■□□□□ 0.64
CSTF3-204ENST00000524556 ANKRD18AQ8IVF6 992 aa19.05■□□□□ 0.64
CSTF3-204ENST00000524556 JARID2Q92833 1246 aaPredicted RBP19.05■□□□□ 0.64
CSTF3-204ENST00000524556 CCDC85AQ96PX6 553 aaPredicted RBP19.05■□□□□ 0.64
CSTF3-204ENST00000524556 CWC25Q9NXE8 425 aaPredicted RBP19.05■□□□□ 0.64
CSTF3-204ENST00000524556 MOB2Q70IA6 237 aa19.04■□□□□ 0.64
CSTF3-204ENST00000524556 UBE2Q2LH0YL09 131 aa19.03■□□□□ 0.64
CSTF3-204ENST00000524556 SCAF8Q9UPN6 1271 aaKnown RBP19.03■□□□□ 0.64
CSTF3-204ENST00000524556 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
CSTF3-204ENST00000524556 METTL22Q9BUU2 404 aaPredicted RBP19.02■□□□□ 0.64
CSTF3-204ENST00000524556 IFT57Q9NWB7 429 aa19.02■□□□□ 0.64
CSTF3-204ENST00000524556 HPS5Q9UPZ3 1129 aa19.02■□□□□ 0.64
CSTF3-204ENST00000524556 WTIPA6NIX2 430 aaPredicted RBP19.01■□□□□ 0.63
CSTF3-204ENST00000524556 PKN2Q16513 984 aaKnown RBP19.01■□□□□ 0.63
CSTF3-204ENST00000524556 NBPF9Q3BBW0 867 aa19.01■□□□□ 0.63
CSTF3-204ENST00000524556 PRAMEF18Q5VWM3 479 aa19.01■□□□□ 0.63
CSTF3-204ENST00000524556 MYH3P11055 1940 aa19.01■□□□□ 0.63
CSTF3-204ENST00000524556 ZNF646O15015 1829 aaPredicted RBP19■□□□□ 0.63
CSTF3-204ENST00000524556 SPEF2Q9C093 1822 aa19■□□□□ 0.63
CSTF3-204ENST00000524556 TBC1D8O95759 1140 aa19■□□□□ 0.63
CSTF3-204ENST00000524556 DDX58O95786 925 aaKnown RBP19■□□□□ 0.63
CSTF3-204ENST00000524556 TM4SF4P48230 202 aa19■□□□□ 0.63
CSTF3-204ENST00000524556 GNAI1P63096 354 aa19■□□□□ 0.63
CSTF3-204ENST00000524556 ZNF296Q8WUU4 475 aaPredicted RBP19■□□□□ 0.63
CSTF3-204ENST00000524556 CDC5LQ99459 802 aaKnown RBP19■□□□□ 0.63
CSTF3-204ENST00000524556 HDAC9Q9UKV0 1011 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms