RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 BRCA1P38398 1863 aaKnown RBP8.12□□□□□ -1.11
LINC00534-204ENST00000524361 AFDNP55196 1824 aaKnown RBP8.12□□□□□ -1.11
LINC00534-204ENST00000524361 UBR2Q8IWV8 1755 aa8.12□□□□□ -1.11
LINC00534-204ENST00000524361 NRXN2Q9P2S2 1712 aa8.12□□□□□ -1.11
LINC00534-204ENST00000524361 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
LINC00534-204ENST00000524361 HSPA1AP0DMV8 641 aaKnown RBP8.11□□□□□ -1.11
LINC00534-204ENST00000524361 HSPA1BP0DMV9 641 aaKnown RBP8.11□□□□□ -1.11
LINC00534-204ENST00000524361 IARSP41252 1262 aaKnown RBP8.11□□□□□ -1.11
LINC00534-204ENST00000524361 FOSBP53539 338 aa8.11□□□□□ -1.11
LINC00534-204ENST00000524361 CRY2Q49AN0 593 aa8.11□□□□□ -1.11
LINC00534-204ENST00000524361 MAP1SQ66K74 1059 aaPredicted RBP8.11□□□□□ -1.11
LINC00534-204ENST00000524361 GIGYF2Q6Y7W6 1299 aaKnown RBP8.11□□□□□ -1.11
LINC00534-204ENST00000524361 COPS6Q7L5N1 327 aa8.11□□□□□ -1.11
LINC00534-204ENST00000524361 ZNF454Q8N9F8 522 aa8.11□□□□□ -1.11
LINC00534-204ENST00000524361 RBM17Q96I25 401 aaKnown RBP8.11□□□□□ -1.11
LINC00534-204ENST00000524361 ARFGEF1Q9Y6D6 1849 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 IQCA1LA6NCM1 817 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 FZD9O00144 591 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 NTSR2O95665 410 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 HCLS1P14317 486 aaPredicted RBP8.1□□□□□ -1.11
LINC00534-204ENST00000524361 EPHX2P34913 555 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 FMR1Q06787 632 aaKnown RBP eCLIP8.1□□□□□ -1.111e-11■■■■■ 36.3
LINC00534-204ENST00000524361 RALBP1Q15311 655 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 SMYD5Q6GMV2 418 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 LRP10Q7Z4F1 713 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 XAGE3Q8WTP9 111 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 JDP2Q8WYK2 163 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 DDX27Q96GQ7 796 aaKnown RBP8.1□□□□□ -1.11
LINC00534-204ENST00000524361 NLRP3Q96P20 1036 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 UTP14AQ9BVJ6 771 aaKnown RBP8.1□□□□□ -1.11
LINC00534-204ENST00000524361 HACL1Q9UJ83 578 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 ADAMTS8Q9UP79 889 aa8.1□□□□□ -1.11
LINC00534-204ENST00000524361 PPEF1O14829 653 aaPredicted RBP8.09□□□□□ -1.11
LINC00534-204ENST00000524361 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
LINC00534-204ENST00000524361 HOXA10P31260 410 aaPredicted RBP8.09□□□□□ -1.11
LINC00534-204ENST00000524361 EPS15P42566 896 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 PPP1R42Q7Z4L9 355 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 TNS4Q8IZW8 715 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 CRAMP1Q96RY5 1269 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 EMILIN3Q9NT22 766 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
LINC00534-204ENST00000524361 SLX4Q8IY92 1834 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 ATP5J2-PTCD1G3V325 749 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 CHL1O00533 1208 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 SEMA3EO15041 775 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 EVI5O60447 810 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
LINC00534-204ENST00000524361 AOC3Q16853 763 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
LINC00534-204ENST00000524361 NLRP10Q86W26 655 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 GPC2Q8N158 579 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 PSMD1Q99460 953 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 CHPF2Q9P2E5 772 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
LINC00534-204ENST00000524361 ANKRD31Q8N7Z5 1873 aa8.08□□□□□ -1.12
LINC00534-204ENST00000524361 SIPA1L3O60292 1781 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-204ENST00000524361 PASKQ96RG2 1323 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 SBF1O95248 1867 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 COL11A2P13942 1736 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-204ENST00000524361 TMEM88BA6NKF7 163 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 ELL2O00472 640 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-204ENST00000524361 PPIP5K2O43314 1243 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 VEGFBP49765 207 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 FLIIQ13045 1269 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 TCIRG1Q13488 830 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.124e-7■■■□□ 17.9
LINC00534-204ENST00000524361 PARP10Q53GL7 1025 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 SLC10A5Q5PT55 438 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 CC2D2BQ6DHV5 1058 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 RUNDC1Q96C34 613 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 TMX4Q9H1E5 349 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-204ENST00000524361 HCSTQ9UBK5 93 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 SCN7AQ01118 1682 aa8.07□□□□□ -1.12
LINC00534-204ENST00000524361 ABCC4O15439 1325 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 ERBB4Q15303 1308 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 MYBBP1AQ9BQG0 1328 aaKnown RBP8.06□□□□□ -1.12
LINC00534-204ENST00000524361 PCNTO95613 3336 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 TRAF5O00463 557 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 SCNN1DP51172 638 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 LMOD3Q0VAK6 560 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 GRM1Q13255 1194 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 E2F4Q16254 413 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 PNMA8AQ86V59 439 aaPredicted RBP8.06□□□□□ -1.12
LINC00534-204ENST00000524361 NIM1KQ8IY84 436 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 JARID2Q92833 1246 aaPredicted RBP8.06□□□□□ -1.12
LINC00534-204ENST00000524361 FAM89AQ96GI7 184 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 KDM4CQ9H3R0 1056 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 DDX21Q9NR30 783 aaKnown RBP eCLIP8.06□□□□□ -1.12
LINC00534-204ENST00000524361 ATP6V0A2Q9Y487 856 aa8.06□□□□□ -1.12
LINC00534-204ENST00000524361 APAF1O14727 1248 aa8.05□□□□□ -1.12
LINC00534-204ENST00000524361 FOXN1O15353 648 aa8.05□□□□□ -1.12
LINC00534-204ENST00000524361 BBOX1O75936 387 aa8.05□□□□□ -1.12
LINC00534-204ENST00000524361 RAD17O75943 681 aa8.05□□□□□ -1.12
LINC00534-204ENST00000524361 LMOD1P29536 600 aaPredicted RBP8.05□□□□□ -1.12
LINC00534-204ENST00000524361 CXCL9Q07325 125 aa8.05□□□□□ -1.12
LINC00534-204ENST00000524361 DEFB115Q30KQ5 88 aa8.05□□□□□ -1.12
LINC00534-204ENST00000524361 HDGFL1Q5TGJ6 251 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms