RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 UTRNP46939 3433 aa26.93■■□□□ 1.9
NKX6-3-202ENST00000524115 RFX7Q2KHR2 1363 aa26.93■■□□□ 1.9
NKX6-3-202ENST00000524115 TJP1Q07157 1748 aa26.93■■□□□ 1.9
NKX6-3-202ENST00000524115 PSMA5P28066 241 aa26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 TICAM2Q86XR7 235 aa26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 MYD88Q99836 296 aa26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 YY1P25490 414 aa26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 CLCN1P35523 988 aa26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 RNF20Q5VTR2 975 aa26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 TEX13AQ9BXU3 409 aaPredicted RBP26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 CYP46A1Q9Y6A2 500 aa26.92■■□□□ 1.9
NKX6-3-202ENST00000524115 MYH14Q7Z406 1995 aaKnown RBP26.91■■□□□ 1.9
NKX6-3-202ENST00000524115 CICQ96RK0 1608 aaPredicted RBP26.91■■□□□ 1.9
NKX6-3-202ENST00000524115 CCDC171Q6TFL3 1326 aa26.91■■□□□ 1.9
NKX6-3-202ENST00000524115 MYL6BP14649 208 aa26.91■■□□□ 1.9
NKX6-3-202ENST00000524115 EAF2Q96CJ1 260 aaPredicted RBP26.91■■□□□ 1.9
NKX6-3-202ENST00000524115 ZSWIM6Q9HCJ5 1215 aa26.91■■□□□ 1.9
NKX6-3-202ENST00000524115 LAMB4A4D0S4 1761 aa26.9■■□□□ 1.9
NKX6-3-202ENST00000524115 AK2P54819 239 aa26.9■■□□□ 1.9
NKX6-3-202ENST00000524115 GPT2Q8TD30 523 aa26.9■■□□□ 1.9
NKX6-3-202ENST00000524115 RABL6Q3YEC7 729 aaPredicted RBP26.89■■□□□ 1.9
NKX6-3-202ENST00000524115 LRP10Q7Z4F1 713 aa26.89■■□□□ 1.9
NKX6-3-202ENST00000524115 PLBD2Q8NHP8 589 aa26.89■■□□□ 1.9
NKX6-3-202ENST00000524115 PDRG1Q9NUG6 133 aa26.89■■□□□ 1.9
NKX6-3-202ENST00000524115 NECTIN1Q15223 517 aa26.89■■□□□ 1.89
NKX6-3-202ENST00000524115 CSPP1Q1MSJ5 1256 aa26.89■■□□□ 1.89
NKX6-3-202ENST00000524115 NOL8Q76FK4 1167 aaKnown RBP26.89■■□□□ 1.89
NKX6-3-202ENST00000524115 RASEFQ8IZ41 740 aa26.89■■□□□ 1.89
NKX6-3-202ENST00000524115 TMEM87AQ8NBN3 555 aa26.89■■□□□ 1.89
NKX6-3-202ENST00000524115 RRAGDQ9NQL2 400 aaPredicted RBP26.89■■□□□ 1.89
NKX6-3-202ENST00000524115 ZPR1O75312 459 aa26.88■■□□□ 1.89
NKX6-3-202ENST00000524115 CASTP20810 708 aaKnown RBP26.88■■□□□ 1.89
NKX6-3-202ENST00000524115 LRSAM1Q6UWE0 723 aa26.88■■□□□ 1.89
NKX6-3-202ENST00000524115 MAP4K1Q92918 833 aa26.88■■□□□ 1.89
NKX6-3-202ENST00000524115 SMC3Q9UQE7 1217 aa26.88■■□□□ 1.89
NKX6-3-202ENST00000524115 ANKRD1Q15327 319 aa26.87■■□□□ 1.89
NKX6-3-202ENST00000524115 ALDH8A1Q9H2A2 487 aaPredicted RBP26.87■■□□□ 1.89
NKX6-3-202ENST00000524115 HMG20BQ9P0W2 317 aa26.87■■□□□ 1.89
NKX6-3-202ENST00000524115 USPL1Q5W0Q7 1092 aa26.86■■□□□ 1.89
NKX6-3-202ENST00000524115 PARP3Q9Y6F1 533 aa26.86■■□□□ 1.89
NKX6-3-202ENST00000524115 ATP5JP18859 108 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 HS1BP3Q53T59 392 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 RUFY3Q7L099 469 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 USP16Q9Y5T5 823 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 ESPNB1AK53 854 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 ZSCAN22P10073 491 aaPredicted RBP26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 YBX3P16989 372 aaKnown RBP eCLIP26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 KCNJ4P48050 445 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 EIF5P55010 431 aaKnown RBP26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 PRPF40BQ6NWY9 871 aaKnown RBP26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 JAKMIP1Q96N16 626 aaKnown RBP26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 FSD1Q9BTV5 496 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 CCDC8Q9H0W5 538 aaPredicted RBP26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 NARFQ9UHQ1 456 aa26.85■■□□□ 1.89
NKX6-3-202ENST00000524115 PTH1RQ03431 593 aa26.84■■□□□ 1.89
NKX6-3-202ENST00000524115 GOLGB1Q14789 3259 aaKnown RBP26.84■■□□□ 1.89
NKX6-3-202ENST00000524115 UBR2Q8IWV8 1755 aa26.84■■□□□ 1.89
NKX6-3-202ENST00000524115 NMIQ13287 307 aaPredicted RBP26.83■■□□□ 1.89
NKX6-3-202ENST00000524115 RBM8AQ9Y5S9 174 aaKnown RBP26.83■■□□□ 1.89
NKX6-3-202ENST00000524115 LETM1O95202 739 aaPredicted RBP26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 A1BGP04217 495 aa26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 RFX5P48382 616 aaPredicted RBP26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 CREB3L3Q68CJ9 461 aa26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 STX6O43752 255 aa26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 TM4SF1P30408 202 aa26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 KRT32Q14532 448 aa26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 TSGA10IPQ3SY00 556 aa26.82■■□□□ 1.88
NKX6-3-202ENST00000524115 RPAP1Q9BWH6 1393 aaPredicted RBP26.81■■□□□ 1.88
NKX6-3-202ENST00000524115 MED23Q9ULK4 1368 aa26.81■■□□□ 1.88
NKX6-3-202ENST00000524115 DDR1Q08345 913 aa26.81■■□□□ 1.88
NKX6-3-202ENST00000524115 ARFGEF2Q9Y6D5 1785 aa26.81■■□□□ 1.88
NKX6-3-202ENST00000524115 A0A087WZG4 1122 aa26.8■■□□□ 1.88
NKX6-3-202ENST00000524115 GRIN3BO60391 1043 aa26.8■■□□□ 1.88
NKX6-3-202ENST00000524115 TNNI3KQ59H18 835 aa26.8■■□□□ 1.88
NKX6-3-202ENST00000524115 SIL1Q9H173 461 aa26.8■■□□□ 1.88
NKX6-3-202ENST00000524115 TMEM63CQ9P1W3 806 aa26.8■■□□□ 1.88
NKX6-3-202ENST00000524115 FPGT-TNNI3KV9GXZ4 949 aa26.8■■□□□ 1.88
NKX6-3-202ENST00000524115 IL6STP40189 918 aaPredicted RBP26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 PTPN12Q05209 780 aaKnown RBP26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 FOXD4L5Q5VV16 416 aaPredicted RBP26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 FOXD4L4Q8WXT5 416 aaPredicted RBP26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 BOLA2Q9H3K6 86 aa26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 BCL2L12Q9HB09 334 aa26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 GPR108Q9NPR9 543 aa26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 AFDNP55196 1824 aaKnown RBP26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 EPHA10Q5JZY3 1008 aa26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 ZNF330Q9Y3S2 320 aaPredicted RBP26.79■■□□□ 1.88
NKX6-3-202ENST00000524115 TGFB2P61812 414 aa26.78■■□□□ 1.88
NKX6-3-202ENST00000524115 WWC3Q9ULE0 1092 aa26.78■■□□□ 1.88
NKX6-3-202ENST00000524115 C4AP0C0L4 1744 aa26.78■■□□□ 1.88
NKX6-3-202ENST00000524115 H7C1W4 665 aa26.77■■□□□ 1.88
NKX6-3-202ENST00000524115 POLRMTO00411 1230 aaKnown RBP26.77■■□□□ 1.88
NKX6-3-202ENST00000524115 SLC27A2O14975 620 aa26.77■■□□□ 1.88
NKX6-3-202ENST00000524115 PDCP20941 246 aa26.77■■□□□ 1.88
NKX6-3-202ENST00000524115 SYT1P21579 422 aa26.77■■□□□ 1.88
NKX6-3-202ENST00000524115 UBE3BQ7Z3V4 1068 aa26.77■■□□□ 1.88
NKX6-3-202ENST00000524115 F13A1P00488 732 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 CASP7P55210 303 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 NFIXQ14938 502 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 BLOC1S2Q6QNY1 142 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms