RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 GIMAP7Q8NHV1 300 aa13.96□□□□□ -0.18
SPIDR-217ENST00000522117 JPH2Q9BR39 696 aaPredicted RBP13.96□□□□□ -0.18
SPIDR-217ENST00000522117 CCDC151A5D8V7 595 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 LARGE1O95461 756 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 GPTP24298 496 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 CHMLP26374 656 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 SCRN1Q12765 414 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 RABGGTAQ92696 567 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 SLC24A3Q9HC58 644 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 TRAK1Q9UPV9 953 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
SPIDR-217ENST00000522117 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 TUBGCP6Q96RT7 1819 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 NEBLO76041 1014 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 KRT85P78386 507 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 DHX40Q8IX18 779 aaKnown RBP13.95□□□□□ -0.18
SPIDR-217ENST00000522117 FAM107BQ9H098 131 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 PPLO60437 1756 aa13.95□□□□□ -0.18
SPIDR-217ENST00000522117 HSPA4P34932 840 aa13.94□□□□□ -0.18
SPIDR-217ENST00000522117 GNL2Q13823 731 aaKnown RBP13.94□□□□□ -0.18
SPIDR-217ENST00000522117 BRD3Q15059 726 aa13.94□□□□□ -0.18
SPIDR-217ENST00000522117 BEND6Q5SZJ8 279 aaPredicted RBP13.94□□□□□ -0.18
SPIDR-217ENST00000522117 CEP85Q6P2H3 762 aa13.94□□□□□ -0.18
SPIDR-217ENST00000522117 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
SPIDR-217ENST00000522117 CAMSAP1Q5T5Y3 1602 aa13.94□□□□□ -0.18
SPIDR-217ENST00000522117 IRX1P78414 480 aaPredicted RBP13.94□□□□□ -0.18
SPIDR-217ENST00000522117 MCM6Q14566 821 aa13.94□□□□□ -0.18
SPIDR-217ENST00000522117 FAM173BQ6P4H8 233 aa13.94□□□□□ -0.18
SPIDR-217ENST00000522117 ADGRF5Q8IZF2 1346 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 VPS37CA5D8V6 355 aaPredicted RBP13.93□□□□□ -0.18
SPIDR-217ENST00000522117 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
SPIDR-217ENST00000522117 MAP3K9P80192 1104 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 TSPYL6Q8N831 410 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 NEDD9Q14511 834 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 HNRNPLLQ8WVV9 542 aaKnown RBP13.93□□□□□ -0.18
SPIDR-217ENST00000522117 ITFG2Q969R8 447 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
SPIDR-217ENST00000522117 TXLNAP40222 546 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 TBC1D8BQ0IIM8 1120 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 HDXQ7Z353 690 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 IL25Q9H293 177 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 MYO3AQ8NEV4 1616 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 ERCC3P19447 782 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 DDR1Q08345 913 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 TSHZ3Q63HK5 1081 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 RPAP2Q8IXW5 612 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-217ENST00000522117 TEX11Q8IYF3 940 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 TATDN2Q93075 761 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 GCFC2P16383 781 aaKnown RBP13.92□□□□□ -0.18
SPIDR-217ENST00000522117 ISM2Q6H9L7 571 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 PRPF38AQ8NAV1 312 aaKnown RBP13.92□□□□□ -0.18
SPIDR-217ENST00000522117 VEZTQ9HBM0 779 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 MRFAP1Q9Y605 127 aa13.92□□□□□ -0.18
SPIDR-217ENST00000522117 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 N4BP2L2Q92802 583 aaPredicted RBP13.91□□□□□ -0.18
SPIDR-217ENST00000522117 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 NRXN1Q9ULB1 1477 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 PIK3C2BO00750 1634 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 ST3GAL1Q11201 340 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 MTA1Q13330 715 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 ZC3H12AQ5D1E8 599 aaKnown RBP13.91□□□□□ -0.18
SPIDR-217ENST00000522117 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
SPIDR-217ENST00000522117 API5Q9BZZ5 524 aaKnown RBP13.91□□□□□ -0.18
SPIDR-217ENST00000522117 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 L1RE1Q9UN81 338 aa13.91□□□□□ -0.18
SPIDR-217ENST00000522117 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
SPIDR-217ENST00000522117 SFPQP23246 707 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPIDR-217ENST00000522117 USP5P45974 858 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 STX1AQ16623 288 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 LEO1Q8WVC0 666 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-217ENST00000522117 GOLGA1Q92805 767 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 FAM169AQ9Y6X4 670 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 BECN2A8MW95 431 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 CCP110O43303 1012 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 PSME1Q06323 249 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 GRIK3Q13003 919 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 FERMT3Q86UX7 667 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 ZKSCAN4Q969J2 545 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-217ENST00000522117 SLC12A5Q9H2X9 1139 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 FAM204AQ9H8W3 233 aa13.9□□□□□ -0.18
SPIDR-217ENST00000522117 ABCC3O15438 1527 aa13.89□□□□□ -0.19
SPIDR-217ENST00000522117 GOLGA6L4A6NEF3 574 aa13.89□□□□□ -0.19
SPIDR-217ENST00000522117 IDI1Q13907 227 aa13.89□□□□□ -0.19
SPIDR-217ENST00000522117 PREPLQ4J6C6 727 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-217ENST00000522117 CDC37L1Q7L3B6 337 aa13.89□□□□□ -0.19
SPIDR-217ENST00000522117 TMC6Q7Z403 805 aa13.89□□□□□ -0.19
SPIDR-217ENST00000522117 EXOC8Q8IYI6 725 aa13.89□□□□□ -0.19
SPIDR-217ENST00000522117 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
SPIDR-217ENST00000522117 COL3A1P02461 1466 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms