RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
SPIDR-214ENST00000521550 FPGT-TNNI3KV9GXZ4 949 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 RFX7Q2KHR2 1363 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 FSD2A1L4K1 749 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 GYS1P13807 737 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 RFX5P48382 616 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-214ENST00000521550 INTS5Q6P9B9 1019 aaKnown RBP16.86■□□□□ 0.29
SPIDR-214ENST00000521550 LMBR1LQ6UX01 489 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 ZSCAN31Q96LW9 406 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-214ENST00000521550 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
SPIDR-214ENST00000521550 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
SPIDR-214ENST00000521550 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.29
SPIDR-214ENST00000521550 CASP7P55210 303 aa16.85■□□□□ 0.29
SPIDR-214ENST00000521550 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
SPIDR-214ENST00000521550 SNRKQ9NRH2 765 aa16.85■□□□□ 0.29
SPIDR-214ENST00000521550 CCDC87Q9NVE4 849 aa16.85■□□□□ 0.29
SPIDR-214ENST00000521550 CYP46A1Q9Y6A2 500 aa16.85■□□□□ 0.29
SPIDR-214ENST00000521550 A1BGP04217 495 aa16.84■□□□□ 0.29
SPIDR-214ENST00000521550 CYP19A1P11511 503 aaPredicted RBP16.84■□□□□ 0.29
SPIDR-214ENST00000521550 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
SPIDR-214ENST00000521550 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
SPIDR-214ENST00000521550 PDIA4P13667 645 aaKnown RBP16.84■□□□□ 0.29
SPIDR-214ENST00000521550 TFCP2Q12800 502 aa16.84■□□□□ 0.29
SPIDR-214ENST00000521550 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
SPIDR-214ENST00000521550 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
SPIDR-214ENST00000521550 KCNB2Q92953 911 aa16.84■□□□□ 0.29
SPIDR-214ENST00000521550 IL25Q9H293 177 aa16.84■□□□□ 0.29
SPIDR-214ENST00000521550 KIF13BQ9NQT8 1826 aa16.83■□□□□ 0.29
SPIDR-214ENST00000521550 NMIQ13287 307 aaPredicted RBP16.83■□□□□ 0.28
SPIDR-214ENST00000521550 TTLL7Q6ZT98 887 aa16.83■□□□□ 0.28
SPIDR-214ENST00000521550 SH2B1Q9NRF2 756 aaPredicted RBP16.83■□□□□ 0.28
SPIDR-214ENST00000521550 HMG20BQ9P0W2 317 aa16.83■□□□□ 0.28
SPIDR-214ENST00000521550 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 FOXO4P98177 505 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 ANKRD1Q15327 319 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 PRPF40BQ6NWY9 871 aaKnown RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 NOL8Q76FK4 1167 aaKnown RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 ZBTB3Q9H5J0 574 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 SRP68Q9UHB9 627 aaKnown RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 FBXO3Q9UK99 471 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 CIAO1O76071 339 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 BRD1O95696 1058 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 TRIM28Q13263 835 aaKnown RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 TCIRG1Q13488 830 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 ZNF784Q8NCA9 323 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 JARID2Q92833 1246 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 JAKMIP1Q96N16 626 aaKnown RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 TTC14Q96N46 770 aa16.82■□□□□ 0.28
SPIDR-214ENST00000521550 TLR7Q9NYK1 1049 aaKnown RBP16.82■□□□□ 0.28
SPIDR-214ENST00000521550 ZPR1O75312 459 aa16.81■□□□□ 0.28
SPIDR-214ENST00000521550 KRT32Q14532 448 aa16.81■□□□□ 0.28
SPIDR-214ENST00000521550 NECTIN1Q15223 517 aa16.81■□□□□ 0.28
SPIDR-214ENST00000521550 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
SPIDR-214ENST00000521550 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
SPIDR-214ENST00000521550 DBNLQ9UJU6 430 aaKnown RBP16.81■□□□□ 0.28
SPIDR-214ENST00000521550 ZBTB1Q9Y2K1 713 aa16.81■□□□□ 0.28
SPIDR-214ENST00000521550 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
SPIDR-214ENST00000521550 MBD3O95983 291 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
SPIDR-214ENST00000521550 AK2P54819 239 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 HAUS7Q99871 368 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 PTH1RQ03431 593 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 CREB3L3Q68CJ9 461 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 RUFY3Q7L099 469 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 ISCA1Q9BUE6 129 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 GRPEL1Q9HAV7 217 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 BRPF3Q9ULD4 1205 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
SPIDR-214ENST00000521550 EYA2O00167 538 aa16.79■□□□□ 0.28
SPIDR-214ENST00000521550 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
SPIDR-214ENST00000521550 LMBRD1Q9NUN5 540 aa16.79■□□□□ 0.28
SPIDR-214ENST00000521550 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
SPIDR-214ENST00000521550 C10orf71Q711Q0 1435 aa16.78■□□□□ 0.28
SPIDR-214ENST00000521550 TGFB2P61812 414 aa16.78■□□□□ 0.28
SPIDR-214ENST00000521550 PKP1Q13835 747 aa16.78■□□□□ 0.28
SPIDR-214ENST00000521550 USPL1Q5W0Q7 1092 aa16.78■□□□□ 0.28
SPIDR-214ENST00000521550 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
SPIDR-214ENST00000521550 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
SPIDR-214ENST00000521550 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.28
SPIDR-214ENST00000521550 PCCAP05165 728 aaPredicted RBP16.77■□□□□ 0.28
SPIDR-214ENST00000521550 NEUROD6Q96NK8 337 aa16.77■□□□□ 0.28
SPIDR-214ENST00000521550 CEP126Q9P2H0 1117 aa16.77■□□□□ 0.28
SPIDR-214ENST00000521550 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
SPIDR-214ENST00000521550 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
SPIDR-214ENST00000521550 MED23Q9ULK4 1368 aa16.77■□□□□ 0.28
SPIDR-214ENST00000521550 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
SPIDR-214ENST00000521550 XRCC6P12956 609 aaKnown RBP eCLIP16.77■□□□□ 0.27
SPIDR-214ENST00000521550 TAF7LQ5H9L4 462 aa16.77■□□□□ 0.27
SPIDR-214ENST00000521550 BLOC1S2Q6QNY1 142 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms