RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 NTSR2O95665 410 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 ANXA1P04083 346 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 PARP10Q53GL7 1025 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 MAMSTRQ6ZN01 415 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 SYNE4Q8N205 404 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 JMYQ8N9B5 988 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 REPIN1Q9BWE0 567 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-221ENST00000520339 ANKRD31Q8N7Z5 1873 aa12.12□□□□□ -0.47
CTNNA1-221ENST00000520339 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
CTNNA1-221ENST00000520339 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
CTNNA1-221ENST00000520339 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CTNNA1-221ENST00000520339 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
CTNNA1-221ENST00000520339 ADAM33Q9BZ11 813 aa12.12□□□□□ -0.47
CTNNA1-221ENST00000520339 DLEC1Q9Y238 1755 aa12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 CRAMP1Q96RY5 1269 aa12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 PHOX2BQ99453 314 aa12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 PSMD1Q99460 953 aa12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 UTP14AQ9BVJ6 771 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-221ENST00000520339 SBF1O95248 1867 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 FZD9O00144 591 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 MS4A1P11836 297 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 CLCN1P35523 988 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 RPGRQ92834 1020 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 RBM17Q96I25 401 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 COL11A2P13942 1736 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 RIC1Q4ADV7 1423 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 SNED1Q8TER0 1413 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 ZNF541Q9H0D2 1346 aa12.1□□□□□ -0.47
CTNNA1-221ENST00000520339 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
CTNNA1-221ENST00000520339 AIMP1Q12904 312 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-221ENST00000520339 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
CTNNA1-221ENST00000520339 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
CTNNA1-221ENST00000520339 NLRP3Q96P20 1036 aa12.09□□□□□ -0.47
CTNNA1-221ENST00000520339 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
CTNNA1-221ENST00000520339 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-221ENST00000520339 OATP04181 439 aa12.08□□□□□ -0.48
CTNNA1-221ENST00000520339 TCIRG1Q13488 830 aa12.08□□□□□ -0.48
CTNNA1-221ENST00000520339 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
CTNNA1-221ENST00000520339 SLC51AQ86UW1 340 aa12.08□□□□□ -0.48
CTNNA1-221ENST00000520339 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
CTNNA1-221ENST00000520339 HOXB7P09629 217 aa12.07□□□□□ -0.48
CTNNA1-221ENST00000520339 ZNF853P0CG23 659 aa12.07□□□□□ -0.48
CTNNA1-221ENST00000520339 LDHDQ86WU2 507 aa12.07□□□□□ -0.48
CTNNA1-221ENST00000520339 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
CTNNA1-221ENST00000520339 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
CTNNA1-221ENST00000520339 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
CTNNA1-221ENST00000520339 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
CTNNA1-221ENST00000520339 WDR90Q96KV7 1748 aa12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 TCERG1O14776 1098 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 PPEF1O14829 653 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 HCLS1P14317 486 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 HDGFL1Q5TGJ6 251 aa12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 METTL3Q86U44 580 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 HACL1Q9UJ83 578 aa12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 ADGRG1Q9Y653 693 aa12.06□□□□□ -0.48
CTNNA1-221ENST00000520339 APAF1O14727 1248 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 BBOX1O75936 387 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 ITGBL1O95965 494 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 EPHX2P34913 555 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 PRSS12P56730 875 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 DUSP27Q5VZP5 1158 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 GPC2Q8N158 579 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 LARGE2Q8N3Y3 721 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 PLBD2Q8NHP8 589 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 MBIPQ9NS73 344 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 TNRC6CQ9HCJ0 1690 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 FER1L6Q2WGJ9 1857 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 ABCC4O15439 1325 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 PASKQ96RG2 1323 aa12.05□□□□□ -0.48
CTNNA1-221ENST00000520339 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 EIF6P56537 245 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 EAPPQ56P03 285 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 ANKRD13DQ6ZTN6 518 aa12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 SP8Q8IXZ3 490 aa12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 RTFDC1Q9BY42 306 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-221ENST00000520339 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms