RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 PMEPA1Q969W9 287 aa9.47□□□□□ -0.89
SQLE-203ENST00000518931 KANSL3Q9P2N6 904 aa9.47□□□□□ -0.89
SQLE-203ENST00000518931 NAGPAQ9UK23 515 aa9.47□□□□□ -0.89
SQLE-203ENST00000518931 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
SQLE-203ENST00000518931 GPR182O15218 404 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
SQLE-203ENST00000518931 PERM1Q5SV97 790 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 PSAPL1Q6NUJ1 521 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 SNX29Q8TEQ0 813 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 DMRTB1Q96MA1 342 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 STK17AQ9UEE5 414 aa9.46□□□□□ -0.9
SQLE-203ENST00000518931 M0R082 166 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 GHRHP01286 108 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 IGHA2P01877 340 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 ALBP02768 609 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 NEFLP07196 543 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 HOXB4P17483 251 aaPredicted RBP9.45□□□□□ -0.9
SQLE-203ENST00000518931 EIF2AK2P19525 551 aaKnown RBP9.45□□□□□ -0.9
SQLE-203ENST00000518931 SNRPNP63162 240 aaKnown RBP9.45□□□□□ -0.9
SQLE-203ENST00000518931 ELMSAN1Q6PJG2 1045 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 NCAPG2Q86XI2 1143 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 ZSCAN29Q8IWY8 852 aaPredicted RBP9.45□□□□□ -0.9
SQLE-203ENST00000518931 ZNF417Q8TAU3 575 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 SPACA7Q96KW9 195 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 ZNF587Q96SQ5 575 aaPredicted RBP9.45□□□□□ -0.9
SQLE-203ENST00000518931 ZFYVE28Q9HCC9 887 aa9.45□□□□□ -0.9
SQLE-203ENST00000518931 EREGO14944 169 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 EIF5BO60841 1220 aaKnown RBP9.44□□□□□ -0.9
SQLE-203ENST00000518931 RGS9O75916 674 aaPredicted RBP9.44□□□□□ -0.9
SQLE-203ENST00000518931 PLCB3Q01970 1234 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 ORC1Q13415 861 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 C20orf204Q6ZNR8 217 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 RBSNQ9H1K0 784 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 SALL4Q9UJQ4 1053 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 CNTNAP5Q8WYK1 1306 aa9.44□□□□□ -0.9
SQLE-203ENST00000518931 ASB16Q96NS5 453 aa9.43□□□□□ -0.9
SQLE-203ENST00000518931 LPIN3Q9BQK8 851 aa9.43□□□□□ -0.9
SQLE-203ENST00000518931 SMG9Q9H0W8 520 aaKnown RBP9.43□□□□□ -0.9
SQLE-203ENST00000518931 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
SQLE-203ENST00000518931 KIF4AO95239 1232 aa9.42□□□□□ -0.9
SQLE-203ENST00000518931 POLR3DP05423 398 aaPredicted RBP9.42□□□□□ -0.9
SQLE-203ENST00000518931 DGKGP49619 791 aa9.42□□□□□ -0.9
SQLE-203ENST00000518931 BEND7Q8N7W2 519 aaPredicted RBP9.42□□□□□ -0.9
SQLE-203ENST00000518931 CEP120Q8N960 986 aa9.42□□□□□ -0.9
SQLE-203ENST00000518931 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
SQLE-203ENST00000518931 LILRB5O75023 590 aa9.41□□□□□ -0.9
SQLE-203ENST00000518931 CCDC27Q2M243 656 aa9.41□□□□□ -0.9
SQLE-203ENST00000518931 USPL1Q5W0Q7 1092 aa9.41□□□□□ -0.9
SQLE-203ENST00000518931 LINC00114Q6XXX2 140 aa9.41□□□□□ -0.9
SQLE-203ENST00000518931 ALKBH8Q96BT7 664 aaKnown RBP9.41□□□□□ -0.9
SQLE-203ENST00000518931 FRRS1LQ9P0K9 344 aa9.41□□□□□ -0.9
SQLE-203ENST00000518931 MKL2Q9ULH7 1088 aa9.41□□□□□ -0.9
SQLE-203ENST00000518931 AMOTL2Q9Y2J4 779 aa9.41□□□□□ -0.9
SQLE-203ENST00000518931 TREHO43280 583 aa9.4□□□□□ -0.9
SQLE-203ENST00000518931 CPNE3O75131 537 aaKnown RBP9.4□□□□□ -0.9
SQLE-203ENST00000518931 DSC3Q14574 896 aa9.4□□□□□ -0.9
SQLE-203ENST00000518931 PODNQ7Z5L7 613 aa9.4□□□□□ -0.9
SQLE-203ENST00000518931 SCARF2Q96GP6 870 aaPredicted RBP9.4□□□□□ -0.9
SQLE-203ENST00000518931 EIF1AYO14602 144 aaKnown RBP9.39□□□□□ -0.91
SQLE-203ENST00000518931 AFF1P51825 1210 aaKnown RBP9.39□□□□□ -0.91
SQLE-203ENST00000518931 ATP11AP98196 1134 aa9.39□□□□□ -0.91
SQLE-203ENST00000518931 TTC9Q92623 222 aa9.39□□□□□ -0.91
SQLE-203ENST00000518931 CSRNP1Q96S65 589 aa9.39□□□□□ -0.91
SQLE-203ENST00000518931 RASSF4Q9H2L5 321 aa9.39□□□□□ -0.91
SQLE-203ENST00000518931 PRDM6Q9NQX0 595 aa9.39□□□□□ -0.91
SQLE-203ENST00000518931 TRPA1O75762 1119 aa9.38□□□□□ -0.91
SQLE-203ENST00000518931 EDN3P14138 238 aa9.38□□□□□ -0.91
SQLE-203ENST00000518931 ACPPP15309 386 aa9.38□□□□□ -0.91
SQLE-203ENST00000518931 CEP135Q66GS9 1140 aa9.38□□□□□ -0.91
SQLE-203ENST00000518931 PBX4Q9BYU1 374 aa9.38□□□□□ -0.91
SQLE-203ENST00000518931 DNAJC25Q9H1X3 360 aa9.38□□□□□ -0.91
SQLE-203ENST00000518931 ANKRD33BA6NCL7 494 aa9.37□□□□□ -0.91
SQLE-203ENST00000518931 COL9A3Q14050 684 aaPredicted RBP9.37□□□□□ -0.91
SQLE-203ENST00000518931 GRIK5Q16478 980 aa9.37□□□□□ -0.91
SQLE-203ENST00000518931 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
SQLE-203ENST00000518931 GALNT12Q8IXK2 581 aa9.37□□□□□ -0.91
SQLE-203ENST00000518931 LATS2Q9NRM7 1088 aa9.37□□□□□ -0.91
SQLE-203ENST00000518931 GNB5O14775 395 aa9.36□□□□□ -0.91
SQLE-203ENST00000518931 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
SQLE-203ENST00000518931 MAPK8P45983 427 aa9.36□□□□□ -0.91
SQLE-203ENST00000518931 TMCO4Q5TGY1 634 aa9.36□□□□□ -0.91
SQLE-203ENST00000518931 CCDC74AQ96AQ1 378 aa9.36□□□□□ -0.91
SQLE-203ENST00000518931 OSMRQ99650 979 aa9.36□□□□□ -0.91
SQLE-203ENST00000518931 DZANK1Q9NVP4 752 aa9.36□□□□□ -0.91
SQLE-203ENST00000518931 TRIM33Q9UPN9 1127 aa9.36□□□□□ -0.91
SQLE-203ENST00000518931 PIK3R2O00459 728 aa9.35□□□□□ -0.91
SQLE-203ENST00000518931 NID1P14543 1247 aa9.35□□□□□ -0.91
SQLE-203ENST00000518931 PEAR1Q5VY43 1037 aaPredicted RBP9.35□□□□□ -0.91
SQLE-203ENST00000518931 DNAJC14Q6Y2X3 702 aaPredicted RBP9.35□□□□□ -0.91
SQLE-203ENST00000518931 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
SQLE-203ENST00000518931 POP1Q99575 1024 aaKnown RBP9.35□□□□□ -0.91
SQLE-203ENST00000518931 PLVAPQ9BX97 442 aa9.35□□□□□ -0.91
SQLE-203ENST00000518931 PNMA6FA0A0J9YX94 578 aa9.34□□□□□ -0.91
SQLE-203ENST00000518931 NFKBIEO00221 500 aa9.34□□□□□ -0.91
SQLE-203ENST00000518931 FMR1Q06787 632 aaKnown RBP eCLIP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms