RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
PVT1-206ENST00000517838 LTBP1Q14766 1721 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 ERVV-1B6SEH8 477 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 HIRAP54198 1017 aaPredicted RBP9.61□□□□□ -0.87
PVT1-206ENST00000517838 CXCL9Q07325 125 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 AOC3Q16853 763 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 NIM1KQ8IY84 436 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 NGEFQ8N5V2 710 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 RPGRQ92834 1020 aaKnown RBP9.61□□□□□ -0.87
PVT1-206ENST00000517838 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
PVT1-206ENST00000517838 THSD7BQ9C0I4 1608 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 PPEF1O14829 653 aaPredicted RBP9.6□□□□□ -0.87
PVT1-206ENST00000517838 TNRC18O15417 2968 aaPredicted RBP9.6□□□□□ -0.87
PVT1-206ENST00000517838 PPIP5K2O43314 1243 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 GPTP24298 496 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 GMPSP49915 693 aaPredicted RBP9.6□□□□□ -0.87
PVT1-206ENST00000517838 DSG2Q14126 1118 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 SUSD4Q5VX71 490 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 DLK2Q6UY11 383 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 TTLL7Q6ZT98 887 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 RTF1Q92541 710 aaKnown RBP9.6□□□□□ -0.87
PVT1-206ENST00000517838 RBM17Q96I25 401 aaKnown RBP9.6□□□□□ -0.87
PVT1-206ENST00000517838 ZNRF3Q9ULT6 936 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 ARFGEF2Q9Y6D5 1785 aa9.6□□□□□ -0.87
PVT1-206ENST00000517838 UBN2Q6ZU65 1347 aa9.59□□□□□ -0.87
PVT1-206ENST00000517838 TAF7Q15545 349 aaPredicted RBP9.59□□□□□ -0.87
PVT1-206ENST00000517838 ZNF34Q8IZ26 560 aa9.59□□□□□ -0.87
PVT1-206ENST00000517838 ZC3H15Q8WU90 426 aaKnown RBP9.59□□□□□ -0.87
PVT1-206ENST00000517838 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
PVT1-206ENST00000517838 ZNF408Q9H9D4 720 aa9.59□□□□□ -0.87
PVT1-206ENST00000517838 ATP6V0A2Q9Y487 856 aa9.59□□□□□ -0.87
PVT1-206ENST00000517838 MAP3K15Q6ZN16 1313 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 BCORQ6W2J9 1755 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 CACNA1SQ13698 1873 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 PDE4AP27815 886 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 NOGQ13253 232 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 CDC37L1Q7L3B6 337 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 USP48Q86UV5 1035 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 TRPM4Q8TD43 1214 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 RTFDC1Q9BY42 306 aaPredicted RBP9.58□□□□□ -0.88
PVT1-206ENST00000517838 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
PVT1-206ENST00000517838 RRP7AQ9Y3A4 280 aaKnown RBP9.58□□□□□ -0.88
PVT1-206ENST00000517838 RIC1Q4ADV7 1423 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 SHTN1A0MZ66 631 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 POTEMA6NI47 508 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 RIMBP2O15034 1052 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 HTATSF1O43719 755 aaKnown RBP9.57□□□□□ -0.88
PVT1-206ENST00000517838 RAD17O75943 681 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 NTSR2O95665 410 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 HUNKP57058 714 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 MFSD10Q14728 455 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 ERICH6BQ5W0A0 696 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 PLPP6Q8IY26 295 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 ZBTB3Q9H5J0 574 aa9.57□□□□□ -0.88
PVT1-206ENST00000517838 SIPA1L3O60292 1781 aaPredicted RBP9.57□□□□□ -0.88
PVT1-206ENST00000517838 IBTKQ9P2D0 1353 aaPredicted RBP9.56□□□□□ -0.88
PVT1-206ENST00000517838 FAM155AB1AL88 458 aaPredicted RBP9.56□□□□□ -0.88
PVT1-206ENST00000517838 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
PVT1-206ENST00000517838 MYL6BP14649 208 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
PVT1-206ENST00000517838 SOX10P56693 466 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
PVT1-206ENST00000517838 KIAA2012Q0VF49 1180 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 SLC10A5Q5PT55 438 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 GPR153Q6NV75 609 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 KIF6Q6ZMV9 814 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 ZNF710Q8N1W2 664 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 CFAP53Q96M91 514 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 NLRP3Q96P20 1036 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 BCL2L13Q9BXK5 485 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 CNOT7Q9UIV1 285 aaKnown RBP9.56□□□□□ -0.88
PVT1-206ENST00000517838 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
PVT1-206ENST00000517838 YDJCA8MPS7 323 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 BBOX1O75936 387 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
PVT1-206ENST00000517838 KIF23Q02241 960 aaPredicted RBP9.55□□□□□ -0.88
PVT1-206ENST00000517838 TNIP1Q15025 636 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 RGMBQ6NW40 437 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 DPP8Q6V1X1 898 aaPredicted RBP9.55□□□□□ -0.88
PVT1-206ENST00000517838 GIGYF2Q6Y7W6 1299 aaKnown RBP9.55□□□□□ -0.88
PVT1-206ENST00000517838 SP8Q8IXZ3 490 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 SUPT20HQ8NEM7 779 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 TMX4Q9H1E5 349 aaPredicted RBP9.55□□□□□ -0.88
PVT1-206ENST00000517838 RNF186Q9NXI6 227 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 ABCC4O15439 1325 aa9.55□□□□□ -0.88
PVT1-206ENST00000517838 H7C1D1 291 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 TRPA1O75762 1119 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 EGFRP00533 1210 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 PPP1R15BQ5SWA1 713 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 SAMD7Q7Z3H4 446 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 LRP10Q7Z4F1 713 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 PPP1R42Q7Z4L9 355 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 MPNDQ8N594 471 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
PVT1-206ENST00000517838 UTP14AQ9BVJ6 771 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms