RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 SMPD1P17405 629 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 MMP16P51512 607 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 NR1H3Q13133 447 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 KRT28Q7Z3Y7 464 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 AEBP1Q8IUX7 1158 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 FTSJ3Q8IY81 847 aaKnown RBP7.45□□□□□ -1.22
CD47-205ENST00000517766 DZIP1LQ8IYY4 767 aaKnown RBP7.45□□□□□ -1.22
CD47-205ENST00000517766 RTF1Q92541 710 aaKnown RBP7.45□□□□□ -1.22
CD47-205ENST00000517766 CHMP4BQ9H444 224 aaKnown RBP7.45□□□□□ -1.22
CD47-205ENST00000517766 LAS1LQ9Y4W2 734 aaKnown RBP7.45□□□□□ -1.22
CD47-205ENST00000517766 DNMT3AQ9Y6K1 912 aaPredicted RBP7.45□□□□□ -1.22
CD47-205ENST00000517766 KDM2BQ8NHM5 1336 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 LRRC37A3O60309 1634 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 MSH6P52701 1360 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 TMEM94Q12767 1356 aa7.45□□□□□ -1.22
CD47-205ENST00000517766 FAM208AQ9UK61 1670 aaKnown RBP7.44□□□□□ -1.22
CD47-205ENST00000517766 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 LMTK3Q96Q04 1460 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 RGPD5Q99666 1765 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 ZBBXA8MT70 800 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 VAMP4O75379 141 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 PDIA4P13667 645 aaKnown RBP7.44□□□□□ -1.22
CD47-205ENST00000517766 LMOD1P29536 600 aaPredicted RBP7.44□□□□□ -1.22
CD47-205ENST00000517766 MVPQ14764 893 aaKnown RBP7.44□□□□□ -1.22
CD47-205ENST00000517766 NUTM2GQ5VZR2 741 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 ATF7IPQ6VMQ6 1270 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 Q8N3U1 123 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 SSH1Q8WYL5 1049 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 ARHGAP45Q92619 1136 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 UCN2Q96RP3 112 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 ORAI2Q96SN7 254 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 PPP1R12CQ9BZL4 782 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 SLC6A16Q9GZN6 736 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 MBIPQ9NS73 344 aa7.44□□□□□ -1.22
CD47-205ENST00000517766 TFIP11Q9UBB9 837 aaKnown RBP7.44□□□□□ -1.22
CD47-205ENST00000517766 ABCC6O95255 1503 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 PALM3A6NDB9 673 aaPredicted RBP7.43□□□□□ -1.22
CD47-205ENST00000517766 FOXO3O43524 673 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 TWISTNBQ3B726 338 aaPredicted RBP7.43□□□□□ -1.22
CD47-205ENST00000517766 PANK1Q8TE04 598 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 BCL2L13Q9BXK5 485 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 BABAM1Q9NWV8 329 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 DDX19BQ9UMR2 479 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 LMO7Q8WWI1 1683 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 USP19O94966 1318 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 NPHP3Q7Z494 1330 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 KIAA0232Q92628 1395 aa7.43□□□□□ -1.22
CD47-205ENST00000517766 CRYBG1Q9Y4K1 1723 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 FAM83GA6ND36 823 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 PIK3CDO00329 1044 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 CHL1O00533 1208 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 GCP02774 474 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 HSPA2P54652 639 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 MTHFSDQ2M296 383 aaKnown RBP7.42□□□□□ -1.22
CD47-205ENST00000517766 TBC1D9Q6ZT07 1266 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 RETREG2Q8NC44 543 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 THUMPD2Q9BTF0 503 aaKnown RBP7.42□□□□□ -1.22
CD47-205ENST00000517766 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 UNC93B1Q9H1C4 597 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 NOB1Q9ULX3 412 aaKnown RBP7.42□□□□□ -1.22
CD47-205ENST00000517766 SOS1Q07889 1333 aaPredicted RBP7.42□□□□□ -1.22
CD47-205ENST00000517766 CRB1P82279 1406 aa7.42□□□□□ -1.22
CD47-205ENST00000517766 GNAT3A8MTJ3 354 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 RLBP1P12271 317 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 TRIM27P14373 513 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 ARHGEF25Q86VW2 580 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 LTV1Q96GA3 475 aaPredicted RBP7.41□□□□□ -1.22
CD47-205ENST00000517766 OCSTAMPQ9BR26 566 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 API5Q9BZZ5 524 aaKnown RBP7.41□□□□□ -1.22
CD47-205ENST00000517766 RWDD1Q9H446 243 aaPredicted RBP7.41□□□□□ -1.22
CD47-205ENST00000517766 MAP3K5Q99683 1374 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 NCAPD2Q15021 1401 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 COL18A1P39060 1754 aa7.41□□□□□ -1.22
CD47-205ENST00000517766 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
CD47-205ENST00000517766 SOX11P35716 441 aa7.4□□□□□ -1.22
CD47-205ENST00000517766 DCTN1Q14203 1278 aa7.4□□□□□ -1.22
CD47-205ENST00000517766 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
CD47-205ENST00000517766 MCM10Q7L590 875 aa7.4□□□□□ -1.22
CD47-205ENST00000517766 FCF1Q9Y324 198 aaKnown RBP7.4□□□□□ -1.22
CD47-205ENST00000517766 PCDHB9Q9Y5E1 797 aa7.4□□□□□ -1.22
CD47-205ENST00000517766 TNS3Q68CZ2 1445 aa7.4□□□□□ -1.22
CD47-205ENST00000517766 MED1Q15648 1581 aaPredicted RBP7.4□□□□□ -1.22
CD47-205ENST00000517766 KDM3BQ7LBC6 1761 aa7.4□□□□□ -1.23
CD47-205ENST00000517766 PXDNQ92626 1479 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 PLEKHG2Q9H7P9 1386 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 MAGEB6P1A0A0J9YX57 407 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 TTC24A2A3L6 582 aaPredicted RBP7.39□□□□□ -1.23
CD47-205ENST00000517766 RNF225M0QZC1 329 aaPredicted RBP7.39□□□□□ -1.23
CD47-205ENST00000517766 XPCQ01831 940 aaPredicted RBP7.39□□□□□ -1.23
CD47-205ENST00000517766 PTK2Q05397 1052 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 AMOTQ4VCS5 1084 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 PLEKHO1Q53GL0 409 aaPredicted RBP7.39□□□□□ -1.23
CD47-205ENST00000517766 ITPRIPQ8IWB1 547 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 TSPYL6Q8N831 410 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 C8orf58Q8NAV2 365 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 BAP1Q92560 729 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 CHMP4AQ9BY43 222 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 TSPYL4Q9UJ04 414 aa7.39□□□□□ -1.23
CD47-205ENST00000517766 N4BP2Q86UW6 1770 aaPredicted RBP7.38□□□□□ -1.23
CD47-205ENST00000517766 OVOS2A0A0G2JMS6 1433 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms