RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 SASH1O94885 1247 aa17.76■□□□□ 0.43
PCM1-204ENST00000517730 NBPF11Q86T75 865 aa17.76■□□□□ 0.43
PCM1-204ENST00000517730 CLCN6P51797 869 aa17.75■□□□□ 0.43
PCM1-204ENST00000517730 Q6ZUG5 572 aa17.75■□□□□ 0.43
PCM1-204ENST00000517730 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
PCM1-204ENST00000517730 DIP2AQ14689 1571 aa17.75■□□□□ 0.43
PCM1-204ENST00000517730 SFPQP23246 707 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCM1-204ENST00000517730 CEBPZQ03701 1054 aaKnown RBP17.75■□□□□ 0.43
PCM1-204ENST00000517730 TEX35Q5T0J7 233 aa17.75■□□□□ 0.43
PCM1-204ENST00000517730 ST7Q9NRC1 585 aa17.75■□□□□ 0.43
PCM1-204ENST00000517730 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
PCM1-204ENST00000517730 PNMA6AP0CW24 399 aaPredicted RBP17.74■□□□□ 0.43
PCM1-204ENST00000517730 TPM4P67936 248 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 SYT10Q6XYQ8 523 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
PCM1-204ENST00000517730 SRRTQ9BXP5 876 aaKnown RBP17.74■□□□□ 0.43
PCM1-204ENST00000517730 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
PCM1-204ENST00000517730 BOLA2Q9H3K6 86 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 MYH15Q9Y2K3 1946 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 PHLPP2Q6ZVD8 1323 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 ATP8B1O43520 1251 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 PFKFB2O60825 505 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 FSIP1Q8NA03 581 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 MAP3K2Q9Y2U5 619 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 RFX7Q2KHR2 1363 aa17.74■□□□□ 0.43
PCM1-204ENST00000517730 TPM1P09493 284 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 ARHGAP29Q52LW3 1261 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 TMCO3Q6UWJ1 677 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 KSR2Q6VAB6 950 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 ADAMTS13Q76LX8 1427 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 NPHP1O15259 732 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 HMGB1P09429 215 aaKnown RBP17.73■□□□□ 0.43
PCM1-204ENST00000517730 SCRN1Q12765 414 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 ZRSR1Q15695 479 aaKnown RBP17.73■□□□□ 0.43
PCM1-204ENST00000517730 NGDNQ8NEJ9 315 aaKnown RBP17.73■□□□□ 0.43
PCM1-204ENST00000517730 USP28Q96RU2 1077 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.73■□□□□ 0.43
PCM1-204ENST00000517730 PIK3C2AO00443 1686 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 UTYO14607 1347 aa17.73■□□□□ 0.43
PCM1-204ENST00000517730 ZRANB2O95218 330 aaKnown RBP eCLIP17.72■□□□□ 0.43
PCM1-204ENST00000517730 CHMP4CQ96CF2 233 aa17.72■□□□□ 0.43
PCM1-204ENST00000517730 SLIT1O75093 1534 aa17.72■□□□□ 0.43
PCM1-204ENST00000517730 ME1P48163 572 aa17.72■□□□□ 0.43
PCM1-204ENST00000517730 ARMCX5Q6P1M9 558 aa17.72■□□□□ 0.43
PCM1-204ENST00000517730 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
PCM1-204ENST00000517730 MRPS27Q92552 414 aaKnown RBP17.72■□□□□ 0.43
PCM1-204ENST00000517730 UBXN4Q92575 508 aa17.72■□□□□ 0.43
PCM1-204ENST00000517730 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
PCM1-204ENST00000517730 PLA2G4AP47712 749 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 ETF1P62495 437 aaKnown RBP17.71■□□□□ 0.43
PCM1-204ENST00000517730 TMC6Q7Z403 805 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 TMEM2Q9UHN6 1383 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 A0A1W2PQ27 194 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 A0A1W2PQ64 194 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 A0A1W2PQD8 194 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 VGLL3A8MV65 326 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 GRM8O00222 908 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 SMC2O95347 1197 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 FMR1NBQ8N0W7 255 aaPredicted RBP17.71■□□□□ 0.43
PCM1-204ENST00000517730 SDF4Q9BRK5 362 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.43
PCM1-204ENST00000517730 TLR7Q9NYK1 1049 aaKnown RBP17.71■□□□□ 0.43
PCM1-204ENST00000517730 ORC3Q9UBD5 711 aaPredicted RBP17.71■□□□□ 0.43
PCM1-204ENST00000517730 DIP2BQ9P265 1576 aa17.71■□□□□ 0.43
PCM1-204ENST00000517730 MRC1P22897 1456 aa17.7■□□□□ 0.42
PCM1-204ENST00000517730 NLRP6P59044 892 aa17.7■□□□□ 0.42
PCM1-204ENST00000517730 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
PCM1-204ENST00000517730 ADALQ6DHV7 355 aa17.7■□□□□ 0.42
PCM1-204ENST00000517730 HOMER1Q86YM7 354 aa17.7■□□□□ 0.42
PCM1-204ENST00000517730 TXLNBQ8N3L3 684 aa17.7■□□□□ 0.42
PCM1-204ENST00000517730 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
PCM1-204ENST00000517730 IFNKQ9P0W0 207 aa17.7■□□□□ 0.42
PCM1-204ENST00000517730 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
PCM1-204ENST00000517730 ANXA1P04083 346 aa17.69■□□□□ 0.42
PCM1-204ENST00000517730 HNRNPH2P55795 449 aaKnown RBP17.69■□□□□ 0.42
PCM1-204ENST00000517730 SUCLG2Q96I99 432 aa17.69■□□□□ 0.42
PCM1-204ENST00000517730 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.425e-6■□□□□ 9.9
PCM1-204ENST00000517730 KIAA1468Q9P260 1216 aa17.69■□□□□ 0.42
PCM1-204ENST00000517730 MNS1Q8NEH6 495 aa17.69■□□□□ 0.42
PCM1-204ENST00000517730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
PCM1-204ENST00000517730 LRRN4CLQ8ND94 238 aa17.68■□□□□ 0.42
PCM1-204ENST00000517730 BICC1Q9H694 974 aaKnown RBP17.68■□□□□ 0.42
PCM1-204ENST00000517730 RTEL1Q9NZ71 1219 aa17.68■□□□□ 0.42
PCM1-204ENST00000517730 ABCC6O95255 1503 aa17.68■□□□□ 0.42
PCM1-204ENST00000517730 A0A087WWV3 80 aa17.68■□□□□ 0.42
PCM1-204ENST00000517730 EFCAB8A8MWE9 144 aa17.68■□□□□ 0.42
PCM1-204ENST00000517730 ATP5JP18859 108 aa17.68■□□□□ 0.42
PCM1-204ENST00000517730 TEFQ10587 303 aa17.68■□□□□ 0.42
PCM1-204ENST00000517730 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
PCM1-204ENST00000517730 BTBD11A6QL63 1104 aa17.67■□□□□ 0.42
PCM1-204ENST00000517730 CYP21A2P08686 494 aa17.67■□□□□ 0.42
PCM1-204ENST00000517730 CWF19L2Q2TBE0 894 aaKnown RBP17.67■□□□□ 0.42
PCM1-204ENST00000517730 CCDC158Q5M9N0 1113 aa17.67■□□□□ 0.42
PCM1-204ENST00000517730 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
PCM1-204ENST00000517730 KAZALD1Q96I82 304 aa17.67■□□□□ 0.42
PCM1-204ENST00000517730 PCDHA7Q9UN72 937 aa17.67■□□□□ 0.42
PCM1-204ENST00000517730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.67■□□□□ 0.42
PCM1-204ENST00000517730 CTDNEP1O95476 244 aa17.67■□□□□ 0.42
PCM1-204ENST00000517730 DPCR1Q3MIW9 517 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms