RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 FRAT2O75474 233 aaPredicted RBP6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 CIAO1O76071 339 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 KCNA3P22001 575 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 ATP2B4P23634 1241 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 IL15P40933 162 aaPredicted RBP6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 MTX1Q13505 466 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 ERICH6BQ5W0A0 696 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 JDP2Q8WYK2 163 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 CCDC136Q96JN2 1154 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 GGA1Q9UJY5 639 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 XDHP47989 1333 aa6.73□□□□□ -1.33
SCARNA16.4-201ENST00000516956 UFL1O94874 794 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 IFIT1P09914 478 aaKnown RBP6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 SLC5A1P13866 664 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 CHRNDQ07001 517 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 CAVIN4Q5BKX8 364 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 HELBQ8NG08 1087 aaPredicted RBP6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 KAZALD1Q96I82 304 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 NEUROD6Q96NK8 337 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 TAOK3Q9H2K8 898 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 COPRSQ9NQ92 184 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 GNL3LQ9NVN8 582 aaKnown RBP6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 MINPP1Q9UNW1 487 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 PA2G4Q9UQ80 394 aaKnown RBP6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 LEMD3Q9Y2U8 911 aa6.72□□□□□ -1.33
SCARNA16.4-201ENST00000516956 PNMA6EA0A0J9YXQ4 647 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PPIP5K2O43314 1243 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 GPSM2P81274 684 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 FKBP4Q02790 459 aaKnown RBP eCLIP6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PTPN12Q05209 780 aaKnown RBP6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 POLA2Q14181 598 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PUM3Q15397 648 aaKnown RBP6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ATP2B3Q16720 1220 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 WASHC4Q2M389 1173 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ZNF804AQ7Z570 1209 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 NIM1KQ8IY84 436 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CLASRPQ8N2M8 674 aaKnown RBP6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LARGE2Q8N3Y3 721 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 KLHDC4Q8TBB5 520 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 GCC1Q96CN9 775 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 KIF1BPQ96EK5 621 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 GPATCH3Q96I76 525 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 EXOC6BQ9Y2D4 811 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LAMB2P55268 1798 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 N4BP2Q86UW6 1770 aaPredicted RBP6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ZNF804BA4D1E1 1349 aa6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TNRC6CQ9HCJ0 1690 aaKnown RBP6.71□□□□□ -1.34
SCARNA16.4-201ENST00000516956 DDX60Q8IY21 1712 aaKnown RBP6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RIMBP2O15034 1052 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TAF5LO75529 589 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PDE8BO95263 885 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 IFIT2P09913 472 aaKnown RBP6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RFX5P48382 616 aaPredicted RBP6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 EIF6P56537 245 aaKnown RBP6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TFCP2Q12800 502 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 UBE4AQ14139 1066 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LRRC24Q50LG9 513 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CCDC158Q5M9N0 1113 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ANKRD45Q5TZF3 282 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LPIN2Q92539 896 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 FBXW7Q969H0 707 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PSMD1Q99460 953 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PUS3Q9BZE2 481 aaKnown RBP6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LRRCC1Q9C099 1032 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 VPS33BQ9H267 617 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PCDHB15Q9Y5E8 787 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ANKRD31Q8N7Z5 1873 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 MYH3P11055 1940 aa6.7□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LMNB1P20700 586 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 IARSP41252 1262 aaKnown RBP6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 HDAC1Q13547 482 aaPredicted RBP6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 B4GALNT3Q6L9W6 998 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 DPY19L2Q6NUT2 758 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 AACSQ86V21 672 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TBC1D16Q8TBP0 767 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 DCTPP1Q9H773 170 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ZNF277Q9NRM2 450 aaPredicted RBP6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PODXL2Q9NZ53 605 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RNF181Q9P0P0 153 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RIPOR2Q9Y4F9 1068 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
SCARNA16.4-201ENST00000516956 A0A1B0GUL7 405 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 YBX3P16989 372 aaKnown RBP eCLIP6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 HIBADHP31937 336 aaKnown RBP6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RASSF7Q02833 373 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TNIP1Q15025 636 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 AOC3Q16853 763 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 DOK7Q18PE1 504 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TTC39AQ5SRH9 613 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 OLFM4Q6UX06 510 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ATG9AQ7Z3C6 839 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RHPN1Q8TCX5 695 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 C7orf43Q8WVR3 580 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 COA1Q9GZY4 146 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 IL1RAPL2Q9NP60 686 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 GPR108Q9NPR9 543 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms