RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 GMPSP49915 693 aaPredicted RBP29.3■■■□□ 2.28
CLDND1-230ENST00000514537 DBNDD1Q9H9R9 158 aa29.3■■■□□ 2.28
CLDND1-230ENST00000514537 LTBP1Q14766 1721 aa29.3■■■□□ 2.28
CLDND1-230ENST00000514537 UFL1O94874 794 aa29.29■■■□□ 2.28
CLDND1-230ENST00000514537 USP50Q70EL3 339 aaPredicted RBP29.29■■■□□ 2.28
CLDND1-230ENST00000514537 CDCA7LQ96GN5 454 aa29.29■■■□□ 2.28
CLDND1-230ENST00000514537 ZC3H12CQ9C0D7 883 aaKnown RBP29.29■■■□□ 2.28
CLDND1-230ENST00000514537 XDHP47989 1333 aa29.28■■■□□ 2.28
CLDND1-230ENST00000514537 CNTROBQ8N137 903 aa29.28■■■□□ 2.28
CLDND1-230ENST00000514537 MRPL50Q8N5N7 158 aaKnown RBP29.28■■■□□ 2.28
CLDND1-230ENST00000514537 ADAMTSL1Q8N6G6 1762 aa29.28■■■□□ 2.28
CLDND1-230ENST00000514537 DOK7Q18PE1 504 aa29.27■■■□□ 2.28
CLDND1-230ENST00000514537 MAP1SQ66K74 1059 aaPredicted RBP29.27■■■□□ 2.28
CLDND1-230ENST00000514537 TRMT2AQ8IZ69 625 aaKnown RBP29.27■■■□□ 2.28
CLDND1-230ENST00000514537 BCL2L13Q9BXK5 485 aa29.27■■■□□ 2.28
CLDND1-230ENST00000514537 ADARB2Q9NS39 739 aaKnown RBP29.27■■■□□ 2.28
CLDND1-230ENST00000514537 MINPP1Q9UNW1 487 aa29.27■■■□□ 2.28
CLDND1-230ENST00000514537 ECE2O60344 883 aa29.26■■■□□ 2.27
CLDND1-230ENST00000514537 ITGA6P23229 1130 aa29.26■■■□□ 2.27
CLDND1-230ENST00000514537 ATP2B4P23634 1241 aa29.26■■■□□ 2.27
CLDND1-230ENST00000514537 CREBZFQ9NS37 354 aa29.26■■■□□ 2.27
CLDND1-230ENST00000514537 FAM161AQ3B820 660 aa29.25■■■□□ 2.27
CLDND1-230ENST00000514537 PSMD14O00487 310 aa29.24■■■□□ 2.27
CLDND1-230ENST00000514537 ALDH1L1O75891 902 aa29.24■■■□□ 2.27
CLDND1-230ENST00000514537 IGHMBP2P38935 993 aaKnown RBP29.24■■■□□ 2.27
CLDND1-230ENST00000514537 FOXO4P98177 505 aa29.24■■■□□ 2.27
CLDND1-230ENST00000514537 SLC4A10Q6U841 1118 aa29.24■■■□□ 2.27
CLDND1-230ENST00000514537 JMYQ8N9B5 988 aa29.24■■■□□ 2.27
CLDND1-230ENST00000514537 KCNQ5Q9NR82 932 aa29.24■■■□□ 2.27
CLDND1-230ENST00000514537 GRM8O00222 908 aa29.23■■■□□ 2.27
CLDND1-230ENST00000514537 SSH1Q8WYL5 1049 aa29.23■■■□□ 2.27
CLDND1-230ENST00000514537 SRCIN1Q9C0H9 1055 aa29.23■■■□□ 2.27
CLDND1-230ENST00000514537 DPF2Q92785 391 aa29.22■■■□□ 2.27
CLDND1-230ENST00000514537 CNOT7Q9UIV1 285 aaKnown RBP29.22■■■□□ 2.27
CLDND1-230ENST00000514537 ZBTB12Q9Y330 459 aaPredicted RBP29.22■■■□□ 2.27
CLDND1-230ENST00000514537 MYH3P11055 1940 aa29.21■■■□□ 2.27
CLDND1-230ENST00000514537 WTIPA6NIX2 430 aaPredicted RBP29.2■■■□□ 2.26
CLDND1-230ENST00000514537 G3V3G9 751 aa29.2■■■□□ 2.26
CLDND1-230ENST00000514537 DCAF8Q5TAQ9 597 aa29.2■■■□□ 2.26
CLDND1-230ENST00000514537 C9orf78Q9NZ63 289 aaPredicted RBP29.2■■■□□ 2.26
CLDND1-230ENST00000514537 PTPRCP08575 1304 aa29.2■■■□□ 2.26
CLDND1-230ENST00000514537 ANKRD18BA2A2Z9 1011 aa29.19■■■□□ 2.26
CLDND1-230ENST00000514537 TMEM88BA6NKF7 163 aa29.19■■■□□ 2.26
CLDND1-230ENST00000514537 H7C1D1 291 aa29.19■■■□□ 2.26
CLDND1-230ENST00000514537 CCT4P50991 539 aaKnown RBP29.19■■■□□ 2.26
CLDND1-230ENST00000514537 EPHA10Q5JZY3 1008 aa29.19■■■□□ 2.26
CLDND1-230ENST00000514537 MPHOSPH8Q99549 860 aa29.19■■■□□ 2.26
CLDND1-230ENST00000514537 SHTN1A0MZ66 631 aa29.18■■■□□ 2.26
CLDND1-230ENST00000514537 VIL1P09327 827 aaKnown RBP29.18■■■□□ 2.26
CLDND1-230ENST00000514537 RPS12P25398 132 aaKnown RBP29.18■■■□□ 2.26
CLDND1-230ENST00000514537 ALDH1L2Q3SY69 923 aa29.18■■■□□ 2.26
CLDND1-230ENST00000514537 MICALL2Q8IY33 904 aa29.18■■■□□ 2.26
CLDND1-230ENST00000514537 PGAP2Q9UHJ9 254 aa29.18■■■□□ 2.26
CLDND1-230ENST00000514537 HIRAP54198 1017 aaPredicted RBP29.17■■■□□ 2.26
CLDND1-230ENST00000514537 IFIT5Q13325 482 aaKnown RBP29.17■■■□□ 2.26
CLDND1-230ENST00000514537 LMBR1LQ6UX01 489 aa29.17■■■□□ 2.26
CLDND1-230ENST00000514537 ANKRD2Q9GZV1 360 aa29.17■■■□□ 2.26
CLDND1-230ENST00000514537 LEMD3Q9Y2U8 911 aa29.17■■■□□ 2.26
CLDND1-230ENST00000514537 DIEXFQ68CQ4 756 aaKnown RBP29.16■■■□□ 2.26
CLDND1-230ENST00000514537 PODNQ7Z5L7 613 aa29.16■■■□□ 2.26
CLDND1-230ENST00000514537 TRPM4Q8TD43 1214 aa29.16■■■□□ 2.26
CLDND1-230ENST00000514537 ZC3H15Q8WU90 426 aaKnown RBP29.16■■■□□ 2.26
CLDND1-230ENST00000514537 PCNTO95613 3336 aa29.16■■■□□ 2.26
CLDND1-230ENST00000514537 MED23Q9ULK4 1368 aa29.15■■■□□ 2.26
CLDND1-230ENST00000514537 CT47B1P0C2W7 299 aaPredicted RBP29.15■■■□□ 2.26
CLDND1-230ENST00000514537 MIER1Q8N108 512 aa29.15■■■□□ 2.26
CLDND1-230ENST00000514537 CHMP3Q9Y3E7 222 aa29.14■■■□□ 2.26
CLDND1-230ENST00000514537 UTYO14607 1347 aa29.14■■■□□ 2.25
CLDND1-230ENST00000514537 NBPF7P0C2Y1 421 aaPredicted RBP29.13■■■□□ 2.25
CLDND1-230ENST00000514537 CHRNDQ07001 517 aa29.13■■■□□ 2.25
CLDND1-230ENST00000514537 MKRN1Q9UHC7 482 aaKnown RBP29.13■■■□□ 2.25
CLDND1-230ENST00000514537 SAMD7Q7Z3H4 446 aa29.12■■■□□ 2.25
CLDND1-230ENST00000514537 KAZALD1Q96I82 304 aa29.12■■■□□ 2.25
CLDND1-230ENST00000514537 ZNF804BA4D1E1 1349 aa29.12■■■□□ 2.25
CLDND1-230ENST00000514537 FMR1Q06787 632 aaKnown RBP eCLIP29.11■■■□□ 2.25
CLDND1-230ENST00000514537 CCDC57Q2TAC2 916 aa29.11■■■□□ 2.25
CLDND1-230ENST00000514537 RSBN1LQ6PCB5 846 aaPredicted RBP29.11■■■□□ 2.25
CLDND1-230ENST00000514537 SUCLG2Q96I99 432 aa29.11■■■□□ 2.25
CLDND1-230ENST00000514537 SMC4Q9NTJ3 1288 aa29.11■■■□□ 2.25
CLDND1-230ENST00000514537 CNTNAP1P78357 1384 aa29.11■■■□□ 2.25
CLDND1-230ENST00000514537 SCN9AQ15858 1988 aa29.1■■■□□ 2.25
CLDND1-230ENST00000514537 TRAF5O00463 557 aa29.1■■■□□ 2.25
CLDND1-230ENST00000514537 TXNRD3Q86VQ6 643 aa29.1■■■□□ 2.25
CLDND1-230ENST00000514537 AGBL3Q8NEM8 1001 aa29.1■■■□□ 2.25
CLDND1-230ENST00000514537 USP17L3A6NCW0 530 aa29.09■■■□□ 2.25
CLDND1-230ENST00000514537 USP17L4A6NCW7 530 aa29.09■■■□□ 2.25
CLDND1-230ENST00000514537 EGFRP00533 1210 aa29.09■■■□□ 2.25
CLDND1-230ENST00000514537 USP17L1Q7RTZ2 530 aa29.09■■■□□ 2.25
CLDND1-230ENST00000514537 COA1Q9GZY4 146 aa29.09■■■□□ 2.25
CLDND1-230ENST00000514537 TBC1D10BQ4KMP7 808 aaPredicted RBP29.08■■■□□ 2.25
CLDND1-230ENST00000514537 ZNF594Q96JF6 807 aaPredicted RBP29.08■■■□□ 2.25
CLDND1-230ENST00000514537 GMLQ99445 158 aa29.08■■■□□ 2.25
CLDND1-230ENST00000514537 GLIS2Q9BZE0 524 aaPredicted RBP29.08■■■□□ 2.25
CLDND1-230ENST00000514537 ZNF609O15014 1411 aa29.08■■■□□ 2.25
CLDND1-230ENST00000514537 BRPF1P55201 1214 aaPredicted RBP29.07■■■□□ 2.24
CLDND1-230ENST00000514537 CST9Q5W186 159 aa29.07■■■□□ 2.24
CLDND1-230ENST00000514537 SPEF2Q9C093 1822 aa29.07■■■□□ 2.24
CLDND1-230ENST00000514537 TAF5LO75529 589 aa29.06■■■□□ 2.24
CLDND1-230ENST00000514537 KLRK1P26718 216 aa29.06■■■□□ 2.24
CLDND1-230ENST00000514537 KCNJ4P48050 445 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms