RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 NUTM2GQ5VZR2 741 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 BPIFA3Q9BQP9 254 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 STK3Q13188 491 aa17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 COL9A3Q14050 684 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 ARID5BQ14865 1188 aa17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 ENGASEQ8NFI3 743 aa17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 TCEANC2Q96MN5 208 aa17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 ERBB3P21860 1342 aa17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-214ENST00000510003 NLRP6P59044 892 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 TIGD1Q96MW7 591 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 ANKARQ7Z5J8 1434 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 NRDCO43847 1150 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 PFKFB2O60825 505 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
SNCAIP-214ENST00000510003 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
SNCAIP-214ENST00000510003 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
SNCAIP-214ENST00000510003 STRCP1A6NGW2 1772 aa17.05■□□□□ 0.32
SNCAIP-214ENST00000510003 GRM8O00222 908 aa17.05■□□□□ 0.32
SNCAIP-214ENST00000510003 CCP110O43303 1012 aa17.05■□□□□ 0.32
SNCAIP-214ENST00000510003 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
SNCAIP-214ENST00000510003 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
SNCAIP-214ENST00000510003 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-214ENST00000510003 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
SNCAIP-214ENST00000510003 FGD1P98174 961 aa17.04■□□□□ 0.32
SNCAIP-214ENST00000510003 Q6ZUG5 572 aa17.04■□□□□ 0.32
SNCAIP-214ENST00000510003 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-214ENST00000510003 GOLPH3LQ9H4A5 285 aa17.04■□□□□ 0.32
SNCAIP-214ENST00000510003 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 ZNF446Q9NWS9 450 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 TRMT1Q9NXH9 659 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 ATP5JP18859 108 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 SCRN1Q12765 414 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 NBPF11Q86T75 865 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 AOPEPQ8N6M6 819 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 SUCLG2Q96I99 432 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 PPP1R13BQ96KQ4 1090 aa17.03■□□□□ 0.32
SNCAIP-214ENST00000510003 A0A1W2PQ27 194 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 A0A1W2PQ64 194 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 A0A1W2PQD8 194 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 TPM4P67936 248 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 SLC20A2Q08357 652 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 TEFQ10587 303 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 E4F1Q66K89 784 aaPredicted RBP17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 NSUN7Q8NE18 718 aaKnown RBP17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 NOL10Q9BSC4 688 aaKnown RBP17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 TMEM51Q9NW97 253 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
SNCAIP-214ENST00000510003 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 KAZALD1Q96I82 304 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 SRRTQ9BXP5 876 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 ARGLU1Q9NWB6 273 aaPredicted RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 V9GYY5 206 aaPredicted RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 ABCC6O95255 1503 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 PHLPP2Q6ZVD8 1323 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 ATP8B1O43520 1251 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 CYP2C19P33261 490 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 MRPS27Q92552 414 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 USP28Q96RU2 1077 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 LGR6Q9HBX8 967 aa17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNCAIP-214ENST00000510003 TPM1P09493 284 aa17■□□□□ 0.31
SNCAIP-214ENST00000510003 SFPQP23246 707 aaKnown RBP eCLIP17■□□□□ 0.31
SNCAIP-214ENST00000510003 AGXT2Q9BYV1 514 aa17■□□□□ 0.31
SNCAIP-214ENST00000510003 ANXA1P04083 346 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 ADALQ6DHV7 355 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 FHOD1Q9Y613 1164 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 SALL1Q9NSC2 1324 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 PTPDC1A2A3K4 754 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 KCNQ3O43525 872 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 GTF2E1P29083 439 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 BBXQ8WY36 941 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 IP6K1Q92551 441 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 TSPYL1Q9H0U9 437 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-214ENST00000510003 COL15A1P39059 1388 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms