RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 AP5Z1O43299 807 aa12.95□□□□□ -0.34
LIN54-207ENST00000508171 MCM5P33992 734 aa12.95□□□□□ -0.34
LIN54-207ENST00000508171 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
LIN54-207ENST00000508171 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
LIN54-207ENST00000508171 CCDC191Q8NCU4 936 aa12.95□□□□□ -0.34
LIN54-207ENST00000508171 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
LIN54-207ENST00000508171 TJP1Q07157 1748 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 A0A1B0GUL7 405 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 EYA2O00167 538 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 KDM4AO75164 1064 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 IL15P40933 162 aaPredicted RBP12.94□□□□□ -0.34
LIN54-207ENST00000508171 SCRN1Q12765 414 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 SPATA32Q96LK8 384 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
LIN54-207ENST00000508171 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 SH3TC1Q8TE82 1336 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 PARP4Q9UKK3 1724 aaKnown RBP12.94□□□□□ -0.34
LIN54-207ENST00000508171 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
LIN54-207ENST00000508171 FGD1P98174 961 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 KCPQ6ZWJ8 1503 aa12.94□□□□□ -0.34
LIN54-207ENST00000508171 ELP1O95163 1332 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 PPFIA3O75145 1194 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 IL2RBP14784 551 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 LEO1Q8WVC0 666 aaPredicted RBP12.93□□□□□ -0.34
LIN54-207ENST00000508171 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 XIRP1Q702N8 1843 aaKnown RBP12.93□□□□□ -0.34
LIN54-207ENST00000508171 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
LIN54-207ENST00000508171 HSPD1P10809 573 aaKnown RBP12.93□□□□□ -0.34
LIN54-207ENST00000508171 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
LIN54-207ENST00000508171 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 CHST3Q7LGC8 479 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 SCAND2PQ9GZW5 306 aaPredicted RBP12.93□□□□□ -0.34
LIN54-207ENST00000508171 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
LIN54-207ENST00000508171 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 HELLSQ9NRZ9 838 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 DACT1Q9NYF0 836 aa12.93□□□□□ -0.34
LIN54-207ENST00000508171 TPM2P07951 284 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 FOSBP53539 338 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 APOBRQ0VD83 1088 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 DHX32Q7L7V1 743 aaKnown RBP12.92□□□□□ -0.34
LIN54-207ENST00000508171 CKAP2LQ8IYA6 745 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 PGBD1Q96JS3 809 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
LIN54-207ENST00000508171 TTLL5Q6EMB2 1281 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
LIN54-207ENST00000508171 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
LIN54-207ENST00000508171 GOLGA6L4A6NEF3 574 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 CCDC192P0DO97 292 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
LIN54-207ENST00000508171 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 MAST3O60307 1309 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 E7EWF7 191 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 H3BQV1 296 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 M0R2C6 588 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 CTDNEP1O95476 244 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 ADORA1P30542 326 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 EXOSC10Q01780 885 aaKnown RBP12.91□□□□□ -0.34
LIN54-207ENST00000508171 CEBPZQ03701 1054 aaKnown RBP12.91□□□□□ -0.34
LIN54-207ENST00000508171 RESTQ13127 1097 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 MAP3K11Q16584 847 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 IFFO2Q5TF58 517 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 DSCC1Q9BVC3 393 aa12.91□□□□□ -0.34
LIN54-207ENST00000508171 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
LIN54-207ENST00000508171 RNF113AO15541 343 aaKnown RBP12.9□□□□□ -0.34
LIN54-207ENST00000508171 PFKFB2O60825 505 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 NR1I2O75469 434 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 TCIRG1Q13488 830 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 OSBP2Q969R2 916 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 CIAO1O76071 339 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 EVA1CP58658 441 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 KIAA2012Q0VF49 1180 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 C17orf53Q8N3J3 647 aaPredicted RBP12.9□□□□□ -0.34
LIN54-207ENST00000508171 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 NAP1L2Q9ULW6 460 aaPredicted RBP12.9□□□□□ -0.34
LIN54-207ENST00000508171 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
LIN54-207ENST00000508171 SHANK3Q9BYB0 1731 aa12.89□□□□□ -0.35
LIN54-207ENST00000508171 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
LIN54-207ENST00000508171 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
LIN54-207ENST00000508171 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
LIN54-207ENST00000508171 TYRO3Q06418 890 aa12.89□□□□□ -0.35
LIN54-207ENST00000508171 SCARF1Q14162 830 aa12.89□□□□□ -0.35
LIN54-207ENST00000508171 LUZP1Q86V48 1076 aa12.89□□□□□ -0.35
LIN54-207ENST00000508171 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
LIN54-207ENST00000508171 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
LIN54-207ENST00000508171 FTOQ9C0B1 505 aaKnown RBP eCLIP12.89□□□□□ -0.35
LIN54-207ENST00000508171 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
LIN54-207ENST00000508171 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
LIN54-207ENST00000508171 HSP90AA2PQ14568 343 aaPredicted RBP12.88□□□□□ -0.35
LIN54-207ENST00000508171 GORABQ5T7V8 394 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms