RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ITPK1Q13572 414 aa21.16■□□□□ 0.98
SFXN1-208ENST00000507823 L1TD1Q5T7N2 865 aaKnown RBP21.16■□□□□ 0.98
SFXN1-208ENST00000507823 TRMT112Q9UI30 125 aaKnown RBP21.16■□□□□ 0.98
SFXN1-208ENST00000507823 TBC1D2BQ9UPU7 963 aa21.16■□□□□ 0.98
SFXN1-208ENST00000507823 BCORQ6W2J9 1755 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 ITGA6P23229 1130 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 ATP6V1AP38606 617 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 GREM2Q9H772 168 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 GOLIM4O00461 696 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 CPA1P15085 419 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 PIP4K2BP78356 416 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 KRT32Q14532 448 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 VGLL2Q8N8G2 317 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 XAGE2Q96GT9 111 aa21.15■□□□□ 0.98
SFXN1-208ENST00000507823 ZNF512BQ96KM6 892 aaPredicted RBP21.15■□□□□ 0.98
SFXN1-208ENST00000507823 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.15■□□□□ 0.98
SFXN1-208ENST00000507823 ANKRD18BA2A2Z9 1011 aa21.14■□□□□ 0.98
SFXN1-208ENST00000507823 CAMTA2O94983 1202 aa21.14■□□□□ 0.98
SFXN1-208ENST00000507823 ACSBG1Q96GR2 724 aa21.14■□□□□ 0.98
SFXN1-208ENST00000507823 ARXQ96QS3 562 aa21.14■□□□□ 0.97
SFXN1-208ENST00000507823 ARAP2Q8WZ64 1704 aa21.13■□□□□ 0.97
SFXN1-208ENST00000507823 RPS6KB1P23443 525 aa21.13■□□□□ 0.97
SFXN1-208ENST00000507823 TAF7LQ5H9L4 462 aa21.13■□□□□ 0.97
SFXN1-208ENST00000507823 CCDC158Q5M9N0 1113 aa21.13■□□□□ 0.97
SFXN1-208ENST00000507823 MCTP1Q6DN14 999 aa21.13■□□□□ 0.97
SFXN1-208ENST00000507823 DSCC1Q9BVC3 393 aa21.13■□□□□ 0.97
SFXN1-208ENST00000507823 DDX60Q8IY21 1712 aaKnown RBP21.13■□□□□ 0.97
SFXN1-208ENST00000507823 WDR33Q9C0J8 1336 aaKnown RBP21.13■□□□□ 0.97
SFXN1-208ENST00000507823 PARP10Q53GL7 1025 aa21.12■□□□□ 0.97
SFXN1-208ENST00000507823 FNBP4Q8N3X1 1017 aaPredicted RBP21.12■□□□□ 0.97
SFXN1-208ENST00000507823 SEC62Q99442 399 aaKnown RBP21.12■□□□□ 0.97
SFXN1-208ENST00000507823 AKAP11Q9UKA4 1901 aa21.12■□□□□ 0.97
SFXN1-208ENST00000507823 LARGE1O95461 756 aa21.12■□□□□ 0.97
SFXN1-208ENST00000507823 CHGBP05060 677 aa21.12■□□□□ 0.97
SFXN1-208ENST00000507823 ADORA1P30542 326 aa21.12■□□□□ 0.97
SFXN1-208ENST00000507823 ANKRD1Q15327 319 aa21.12■□□□□ 0.97
SFXN1-208ENST00000507823 TAF6LQ9Y6J9 622 aa21.12■□□□□ 0.97
SFXN1-208ENST00000507823 RTL9Q8NET4 1388 aa21.11■□□□□ 0.97
SFXN1-208ENST00000507823 RGL2O15211 777 aa21.11■□□□□ 0.97
SFXN1-208ENST00000507823 RNF113AO15541 343 aaKnown RBP21.11■□□□□ 0.97
SFXN1-208ENST00000507823 BLOC1S2Q6QNY1 142 aa21.11■□□□□ 0.97
SFXN1-208ENST00000507823 GZF1Q9H116 711 aaPredicted RBP21.11■□□□□ 0.97
SFXN1-208ENST00000507823 ST3GAL1Q11201 340 aa21.11■□□□□ 0.97
SFXN1-208ENST00000507823 LDHAL6AQ6ZMR3 332 aa21.11■□□□□ 0.97
SFXN1-208ENST00000507823 THSD7AQ9UPZ6 1657 aa21.11■□□□□ 0.97
SFXN1-208ENST00000507823 GOLGA6L3A6NEY3 463 aa21.1■□□□□ 0.97
SFXN1-208ENST00000507823 CCDC129Q6ZRS4 1044 aa21.1■□□□□ 0.97
SFXN1-208ENST00000507823 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
SFXN1-208ENST00000507823 MYH7P12883 1935 aa21.1■□□□□ 0.97
SFXN1-208ENST00000507823 ATP2B3Q16720 1220 aa21.1■□□□□ 0.97
SFXN1-208ENST00000507823 LRRFIP1Q32MZ4 808 aaKnown RBP21.1■□□□□ 0.97
SFXN1-208ENST00000507823 TTC39AQ5SRH9 613 aa21.1■□□□□ 0.97
SFXN1-208ENST00000507823 SUSD4Q5VX71 490 aa21.1■□□□□ 0.97
SFXN1-208ENST00000507823 CCDC85AQ96PX6 553 aaPredicted RBP21.1■□□□□ 0.97
SFXN1-208ENST00000507823 ZFYP08048 801 aaPredicted RBP21.09■□□□□ 0.97
SFXN1-208ENST00000507823 ME3Q16798 604 aa21.09■□□□□ 0.97
SFXN1-208ENST00000507823 METTL24Q5JXM2 366 aa21.09■□□□□ 0.97
SFXN1-208ENST00000507823 COL9A3Q14050 684 aaPredicted RBP21.09■□□□□ 0.97
SFXN1-208ENST00000507823 TPCN1Q9ULQ1 816 aa21.08■□□□□ 0.97
SFXN1-208ENST00000507823 DDX49Q9Y6V7 483 aaKnown RBP21.08■□□□□ 0.97
SFXN1-208ENST00000507823 MAST3O60307 1309 aa21.08■□□□□ 0.97
SFXN1-208ENST00000507823 CYP21A2P08686 494 aa21.08■□□□□ 0.97
SFXN1-208ENST00000507823 TOB2Q14106 344 aaPredicted RBP21.08■□□□□ 0.97
SFXN1-208ENST00000507823 UTP14AQ9BVJ6 771 aaKnown RBP21.08■□□□□ 0.97
SFXN1-208ENST00000507823 UBAP1LF5GYI3 381 aa21.08■□□□□ 0.96
SFXN1-208ENST00000507823 KCNQ2O43526 872 aa21.08■□□□□ 0.96
SFXN1-208ENST00000507823 PDE8BO95263 885 aa21.08■□□□□ 0.96
SFXN1-208ENST00000507823 SMC3Q9UQE7 1217 aa21.08■□□□□ 0.96
SFXN1-208ENST00000507823 LAMA4Q16363 1823 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 PDIA4P13667 645 aaKnown RBP21.07■□□□□ 0.96
SFXN1-208ENST00000507823 FAM98CQ17RN3 349 aaKnown RBP21.07■□□□□ 0.96
SFXN1-208ENST00000507823 NTSR2O95665 410 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 FGFR2P21802 821 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 SCARF1Q14162 830 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 GORABQ5T7V8 394 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 NEK1Q96PY6 1258 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 CNNM1Q9NRU3 951 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 MROH5Q6ZUA9 1318 aa21.07■□□□□ 0.96
SFXN1-208ENST00000507823 HSP90B1P14625 803 aaKnown RBP21.06■□□□□ 0.96
SFXN1-208ENST00000507823 CLEC4GQ6UXB4 293 aa21.06■□□□□ 0.96
SFXN1-208ENST00000507823 LARP6Q9BRS8 491 aaKnown RBP21.06■□□□□ 0.96
SFXN1-208ENST00000507823 SYT1P21579 422 aa21.06■□□□□ 0.96
SFXN1-208ENST00000507823 SPATA31A6Q5VVP1 1343 aa21.06■□□□□ 0.96
SFXN1-208ENST00000507823 CCDC83Q8IWF9 413 aa21.06■□□□□ 0.96
SFXN1-208ENST00000507823 CNTNAP4Q9C0A0 1308 aa21.06■□□□□ 0.96
SFXN1-208ENST00000507823 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
SFXN1-208ENST00000507823 ZSCAN22P10073 491 aaPredicted RBP21.05■□□□□ 0.96
SFXN1-208ENST00000507823 HSPD1P10809 573 aaKnown RBP21.05■□□□□ 0.96
SFXN1-208ENST00000507823 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
SFXN1-208ENST00000507823 STX6O43752 255 aa21.05■□□□□ 0.96
SFXN1-208ENST00000507823 MRE11P49959 708 aa21.05■□□□□ 0.96
SFXN1-208ENST00000507823 TMEM87AQ8NBN3 555 aa21.05■□□□□ 0.96
SFXN1-208ENST00000507823 NGLY1Q96IV0 654 aa21.05■□□□□ 0.96
SFXN1-208ENST00000507823 PRPF40AO75400 957 aaKnown RBP21.04■□□□□ 0.96
SFXN1-208ENST00000507823 HMGB1P09429 215 aaKnown RBP21.04■□□□□ 0.96
SFXN1-208ENST00000507823 ARID4AP29374 1257 aaPredicted RBP21.04■□□□□ 0.96
SFXN1-208ENST00000507823 OSBP2Q969R2 916 aa21.04■□□□□ 0.96
SFXN1-208ENST00000507823 ATRNO75882 1429 aa21.04■□□□□ 0.96
SFXN1-208ENST00000507823 XRCC6P12956 609 aaKnown RBP eCLIP21.04■□□□□ 0.96
SFXN1-208ENST00000507823 ZAP70P43403 619 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms