RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 TRIM27P14373 513 aa24.29■■□□□ 1.48
LMNA-221ENST00000506981 KIAA2012Q0VF49 1180 aa24.29■■□□□ 1.48
LMNA-221ENST00000506981 WASHC4Q2M389 1173 aa24.29■■□□□ 1.48
LMNA-221ENST00000506981 PODXL2Q9NZ53 605 aa24.29■■□□□ 1.48
LMNA-221ENST00000506981 HDAC5Q9UQL6 1122 aa24.29■■□□□ 1.48
LMNA-221ENST00000506981 FZD9O00144 591 aa24.28■■□□□ 1.48
LMNA-221ENST00000506981 UBTFL1P0CB47 393 aaPredicted RBP24.28■■□□□ 1.48
LMNA-221ENST00000506981 C16orf71Q8IYS4 520 aaPredicted RBP24.28■■□□□ 1.48
LMNA-221ENST00000506981 BICC1Q9H694 974 aaKnown RBP24.28■■□□□ 1.48
LMNA-221ENST00000506981 ZNF541Q9H0D2 1346 aa24.28■■□□□ 1.48
LMNA-221ENST00000506981 TBC1D16Q8TBP0 767 aa24.27■■□□□ 1.48
LMNA-221ENST00000506981 RRAGCQ9HB90 399 aa24.27■■□□□ 1.48
LMNA-221ENST00000506981 POLLQ9UGP5 575 aa24.27■■□□□ 1.48
LMNA-221ENST00000506981 DDNO94850 711 aaPredicted RBP24.26■■□□□ 1.47
LMNA-221ENST00000506981 ATP2B4P23634 1241 aa24.26■■□□□ 1.47
LMNA-221ENST00000506981 INTS3Q68E01 1043 aaKnown RBP24.26■■□□□ 1.47
LMNA-221ENST00000506981 CLUAP1Q96AJ1 413 aa24.26■■□□□ 1.47
LMNA-221ENST00000506981 MINPP1Q9UNW1 487 aa24.26■■□□□ 1.47
LMNA-221ENST00000506981 G3V3G9 751 aa24.25■■□□□ 1.47
LMNA-221ENST00000506981 KIF3CO14782 793 aa24.25■■□□□ 1.47
LMNA-221ENST00000506981 VEGFAP15692 232 aaPredicted RBP24.25■■□□□ 1.47
LMNA-221ENST00000506981 DCAF8Q5TAQ9 597 aa24.25■■□□□ 1.47
LMNA-221ENST00000506981 FTSJ3Q8IY81 847 aaKnown RBP24.25■■□□□ 1.47
LMNA-221ENST00000506981 KAZALD1Q96I82 304 aa24.25■■□□□ 1.47
LMNA-221ENST00000506981 ZC3H12CQ9C0D7 883 aaKnown RBP24.25■■□□□ 1.47
LMNA-221ENST00000506981 ANKRD2Q9GZV1 360 aa24.25■■□□□ 1.47
LMNA-221ENST00000506981 ZNRF3Q9ULT6 936 aa24.25■■□□□ 1.47
LMNA-221ENST00000506981 PSME4Q14997 1843 aa24.24■■□□□ 1.47
LMNA-221ENST00000506981 RIMBP2O15034 1052 aa24.24■■□□□ 1.47
LMNA-221ENST00000506981 RABL6Q3YEC7 729 aaPredicted RBP24.24■■□□□ 1.47
LMNA-221ENST00000506981 GPC2Q8N158 579 aa24.23■■□□□ 1.47
LMNA-221ENST00000506981 YTHDC1Q96MU7 727 aaKnown RBP24.23■■□□□ 1.47
LMNA-221ENST00000506981 CNNM1Q9NRU3 951 aa24.23■■□□□ 1.47
LMNA-221ENST00000506981 GJA3Q9Y6H8 435 aa24.23■■□□□ 1.47
LMNA-221ENST00000506981 IQCA1LA6NCM1 817 aa24.22■■□□□ 1.47
LMNA-221ENST00000506981 GNAI3P08754 354 aa24.22■■□□□ 1.47
LMNA-221ENST00000506981 KCNJ4P48050 445 aa24.22■■□□□ 1.47
LMNA-221ENST00000506981 LDHAL6AQ6ZMR3 332 aa24.22■■□□□ 1.47
LMNA-221ENST00000506981 ANKRD44Q8N8A2 993 aa24.22■■□□□ 1.47
LMNA-221ENST00000506981 GPR101Q96P66 508 aaPredicted RBP24.22■■□□□ 1.47
LMNA-221ENST00000506981 TNNQ9UQP3 1299 aa24.22■■□□□ 1.47
LMNA-221ENST00000506981 CHRNDQ07001 517 aa24.21■■□□□ 1.47
LMNA-221ENST00000506981 ZNF594Q96JF6 807 aaPredicted RBP24.21■■□□□ 1.47
LMNA-221ENST00000506981 SCN9AQ15858 1988 aa24.2■■□□□ 1.46
LMNA-221ENST00000506981 DZIP1LQ8IYY4 767 aaKnown RBP24.2■■□□□ 1.46
LMNA-221ENST00000506981 L3MBTL3Q96JM7 780 aaPredicted RBP24.2■■□□□ 1.46
LMNA-221ENST00000506981 MEIS3Q99687 375 aa24.2■■□□□ 1.46
LMNA-221ENST00000506981 DBNDD1Q9H9R9 158 aa24.2■■□□□ 1.46
LMNA-221ENST00000506981 RCAN3Q9UKA8 241 aa24.2■■□□□ 1.46
LMNA-221ENST00000506981 LEMD3Q9Y2U8 911 aa24.2■■□□□ 1.46
LMNA-221ENST00000506981 MED23Q9ULK4 1368 aa24.19■■□□□ 1.46
LMNA-221ENST00000506981 TOMM70O94826 608 aa24.19■■□□□ 1.46
LMNA-221ENST00000506981 TNIP1Q15025 636 aa24.19■■□□□ 1.46
LMNA-221ENST00000506981 CIAPIN1Q6FI81 312 aa24.19■■□□□ 1.46
LMNA-221ENST00000506981 TMEM57Q8N5G2 664 aa24.19■■□□□ 1.46
LMNA-221ENST00000506981 ECE2O60344 883 aa24.18■■□□□ 1.46
LMNA-221ENST00000506981 LMOD1P29536 600 aaPredicted RBP24.18■■□□□ 1.46
LMNA-221ENST00000506981 C1QTNF8P60827 252 aa24.18■■□□□ 1.46
LMNA-221ENST00000506981 DOK7Q18PE1 504 aa24.18■■□□□ 1.46
LMNA-221ENST00000506981 LRRFIP2Q9Y608 721 aaKnown RBP24.18■■□□□ 1.46
LMNA-221ENST00000506981 ZNF804BA4D1E1 1349 aa24.17■■□□□ 1.46
LMNA-221ENST00000506981 MS4A1P11836 297 aa24.17■■□□□ 1.46
LMNA-221ENST00000506981 CXCL9Q07325 125 aa24.17■■□□□ 1.46
LMNA-221ENST00000506981 RAD17O75943 681 aa24.16■■□□□ 1.46
LMNA-221ENST00000506981 HACL1Q9UJ83 578 aa24.16■■□□□ 1.46
LMNA-221ENST00000506981 YDJCA8MPS7 323 aa24.15■■□□□ 1.46
LMNA-221ENST00000506981 PLIN1O60240 522 aa24.15■■□□□ 1.46
LMNA-221ENST00000506981 ITPRIPQ8IWB1 547 aa24.15■■□□□ 1.46
LMNA-221ENST00000506981 RBM46Q8TBY0 533 aaKnown RBP24.15■■□□□ 1.46
LMNA-221ENST00000506981 MROH5Q6ZUA9 1318 aa24.14■■□□□ 1.46
LMNA-221ENST00000506981 POTECB2RU33 542 aa24.14■■□□□ 1.45
LMNA-221ENST00000506981 TAF5LO75529 589 aa24.14■■□□□ 1.45
LMNA-221ENST00000506981 HELBQ8NG08 1087 aaPredicted RBP24.14■■□□□ 1.45
LMNA-221ENST00000506981 GNAI2P04899 355 aa24.13■■□□□ 1.45
LMNA-221ENST00000506981 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.12■■□□□ 1.45
LMNA-221ENST00000506981 PUS3Q9BZE2 481 aaKnown RBP24.12■■□□□ 1.45
LMNA-221ENST00000506981 TAF1DQ9H5J8 278 aaPredicted RBP24.12■■□□□ 1.45
LMNA-221ENST00000506981 EPHX2P34913 555 aa24.11■■□□□ 1.45
LMNA-221ENST00000506981 METTL24Q5JXM2 366 aa24.11■■□□□ 1.45
LMNA-221ENST00000506981 PODNQ7Z5L7 613 aa24.11■■□□□ 1.45
LMNA-221ENST00000506981 SMC1BQ8NDV3 1235 aa24.11■■□□□ 1.45
LMNA-221ENST00000506981 KLHDC4Q8TBB5 520 aa24.11■■□□□ 1.45
LMNA-221ENST00000506981 MYH13Q9UKX3 1938 aa24.11■■□□□ 1.45
LMNA-221ENST00000506981 WTIPA6NIX2 430 aaPredicted RBP24.1■■□□□ 1.45
LMNA-221ENST00000506981 PSMD14O00487 310 aa24.1■■□□□ 1.45
LMNA-221ENST00000506981 RLBP1P12271 317 aa24.1■■□□□ 1.45
LMNA-221ENST00000506981 GMPSP49915 693 aaPredicted RBP24.1■■□□□ 1.45
LMNA-221ENST00000506981 COA1Q9GZY4 146 aa24.1■■□□□ 1.45
LMNA-221ENST00000506981 RIPOR2Q9Y4F9 1068 aa24.1■■□□□ 1.45
LMNA-221ENST00000506981 ZNF646O15015 1829 aaPredicted RBP24.1■■□□□ 1.45
LMNA-221ENST00000506981 SCNN1DP51172 638 aa24.09■■□□□ 1.45
LMNA-221ENST00000506981 FSTL1Q12841 308 aa24.09■■□□□ 1.45
LMNA-221ENST00000506981 LRRC24Q50LG9 513 aa24.09■■□□□ 1.45
LMNA-221ENST00000506981 EAPPQ56P03 285 aaPredicted RBP24.09■■□□□ 1.45
LMNA-221ENST00000506981 PNMA8AQ86V59 439 aaPredicted RBP24.09■■□□□ 1.45
LMNA-221ENST00000506981 PANK1Q8TE04 598 aa24.09■■□□□ 1.45
LMNA-221ENST00000506981 EYA2O00167 538 aa24.08■■□□□ 1.45
LMNA-221ENST00000506981 RFX5P48382 616 aaPredicted RBP24.08■■□□□ 1.45
LMNA-221ENST00000506981 UBE4AQ14139 1066 aa24.08■■□□□ 1.45
LMNA-221ENST00000506981 ZNF804AQ7Z570 1209 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms