RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 KIF24Q5T7B8 1368 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 KIAA1210Q9ULL0 1709 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 MARCKSP29966 332 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-208ENST00000504387 EVCP57679 992 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 EAF2Q96CJ1 260 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-208ENST00000504387 IRX2Q9BZI1 471 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-208ENST00000504387 GPHNQ9NQX3 736 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-208ENST00000504387 A0A0G2JS52 829 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 BTBD11A6QL63 1104 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 SASH3O75995 380 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 SERPINC1P01008 464 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 CFAP100Q494V2 611 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 DESI2Q9BSY9 194 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-208ENST00000504387 PUF60Q9UHX1 559 aaKnown RBP8.88□□□□□ -0.99
NEDD9-208ENST00000504387 RPS6KB1P23443 525 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 PSMA5P28066 241 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 ZSCAN26Q16670 478 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 DDX46Q7L014 1031 aaKnown RBP8.88□□□□□ -0.99
NEDD9-208ENST00000504387 NBPF11Q86T75 865 aa8.88□□□□□ -0.99
NEDD9-208ENST00000504387 LMTK2Q8IWU2 1503 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 GNG11P61952 73 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 PPARDQ03181 441 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-208ENST00000504387 TTC21AQ8NDW8 1320 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 CPLX3Q8WVH0 158 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 DPF2Q92785 391 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 SUGCTQ9HAC7 445 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 ZC3H13Q5T200 1668 aaKnown RBP8.87□□□□□ -0.99
NEDD9-208ENST00000504387 CPS1P31327 1500 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 ROBO2Q9HCK4 1378 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 NDUFA8P51970 172 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 SCRN1Q12765 414 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 G3BP1Q13283 466 aaKnown RBP eCLIP8.87□□□□□ -0.991e-7■■□□□ 12.7
NEDD9-208ENST00000504387 SMC1AQ14683 1233 aaKnown RBP8.87□□□□□ -0.99
NEDD9-208ENST00000504387 RNF20Q5VTR2 975 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 GPATCH11Q8N954 259 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 GPATCH3Q96I76 525 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 ANO10Q9NW15 660 aa8.87□□□□□ -0.99
NEDD9-208ENST00000504387 ARGLU1Q9NWB6 273 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-208ENST00000504387 TMEM232C9JQI7 657 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 SLC39A6Q13433 755 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 SYCP1Q15431 976 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 PROSER3Q2NL68 480 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 C1orf141Q5JVX7 400 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 SPECC1Q5M775 1068 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 DNAAF4Q8WXU2 420 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 VPS18Q9P253 973 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 CFAP45Q9UL16 551 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 PPLO60437 1756 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 IBSPP21815 317 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-208ENST00000504387 HAND2P61296 217 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 RESTQ13127 1097 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 STK38Q15208 465 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 HSP90AB3PQ58FF7 597 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 RIC3Q7Z5B4 369 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 GDAP1L1Q96MZ0 367 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 MAP3K2Q9Y2U5 619 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 SIGLEC1Q9BZZ2 1709 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 SETD1BQ9UPS6 1966 aaKnown RBP8.86□□□□□ -0.99
NEDD9-208ENST00000504387 MYO3AQ8NEV4 1616 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 ALKQ9UM73 1620 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 FANCGO15287 622 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 ADKP55263 362 aaKnown RBP8.86□□□□□ -0.99
NEDD9-208ENST00000504387 ZC3H6P61129 1189 aaKnown RBP8.86□□□□□ -0.99
NEDD9-208ENST00000504387 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 EVI5LQ96CN4 794 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 MRFAP1L1Q96HT8 127 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 NEK1Q96PY6 1258 aa8.86□□□□□ -0.99
NEDD9-208ENST00000504387 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
NEDD9-208ENST00000504387 ORC3Q9UBD5 711 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-208ENST00000504387 PTPDC1A2A3K4 754 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 H2AFXP16104 143 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-208ENST00000504387 IRX3P78415 501 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-208ENST00000504387 MAP4K1Q92918 833 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 WDR24Q96S15 920 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 LZTFL1Q9NQ48 299 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 CLIC4Q9Y696 253 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 PIK3C2BO00750 1634 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 ARHGEF28Q8N1W1 1705 aaKnown RBP8.85□□□□□ -0.99
NEDD9-208ENST00000504387 MYO1CO00159 1063 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 N4BP1O75113 896 aaKnown RBP8.85□□□□□ -0.99
NEDD9-208ENST00000504387 ATP2B1P20020 1258 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 SART3Q15020 963 aaKnown RBP8.85□□□□□ -0.99
NEDD9-208ENST00000504387 E2F4Q16254 413 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 DRC1Q96MC2 740 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 NEUROD6Q96NK8 337 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 CCDC85AQ96PX6 553 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-208ENST00000504387 RASSF4Q9H2L5 321 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 PCDHA7Q9UN72 937 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 ELP1O95163 1332 aa8.85□□□□□ -0.99
NEDD9-208ENST00000504387 NRDCO43847 1150 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 RHOXF2BP0C7M4 288 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 RXRAP19793 462 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 UBASH3AP57075 661 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms