RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 CCDC113Q9H0I3 377 aa7.37□□□□□ -1.23
GYPA-203ENST00000503627 CHRDQ9H2X0 955 aa7.37□□□□□ -1.23
GYPA-203ENST00000503627 GABBR1Q9UBS5 961 aa7.37□□□□□ -1.23
GYPA-203ENST00000503627 ADH1AP07327 375 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 GARTP22102 1010 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 CCDC85BQ15834 202 aaPredicted RBP7.36□□□□□ -1.23
GYPA-203ENST00000503627 PCNX4Q63HM2 1172 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 FBXL19Q6PCT2 694 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 TMED8Q6PL24 325 aaPredicted RBP7.36□□□□□ -1.23
GYPA-203ENST00000503627 CELF2-AS1Q8N7Q2 184 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 GLIS3Q8NEA6 775 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 KLRG1Q96E93 195 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 SHDQ96IW2 340 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 TMEM260Q9NX78 707 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 TMEM63CQ9P1W3 806 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 USP20Q9Y2K6 914 aa7.36□□□□□ -1.23
GYPA-203ENST00000503627 PPEF1O14829 653 aaPredicted RBP7.35□□□□□ -1.23
GYPA-203ENST00000503627 SMAD7O15105 426 aaKnown RBP7.35□□□□□ -1.23
GYPA-203ENST00000503627 ADH1CP00326 375 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 NR3C2P08235 984 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 IDH3AP50213 366 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 SQSTM1Q13501 440 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 IER5Q5VY09 327 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 MORC4Q8TE76 937 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 CPLX3Q8WVH0 158 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 JDP2Q8WYK2 163 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 EMID1Q96A84 441 aaPredicted RBP7.35□□□□□ -1.23
GYPA-203ENST00000503627 SRRTQ9BXP5 876 aaKnown RBP7.35□□□□□ -1.23
GYPA-203ENST00000503627 NIFKQ9BYG3 293 aaKnown RBP7.35□□□□□ -1.23
GYPA-203ENST00000503627 ELP3Q9H9T3 547 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 PRR12Q9ULL5 1215 aa7.35□□□□□ -1.23
GYPA-203ENST00000503627 R3HCC1Q9Y3T6 440 aaKnown RBP7.35□□□□□ -1.23
GYPA-203ENST00000503627 EREGO14944 169 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 GREM1O60565 184 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 MASP1P48740 699 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 NR5A1Q13285 461 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 CTC1Q2NKJ3 1217 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 FMNL3Q8IVF7 1028 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 ANKRD24Q8TF21 1146 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 IER2Q9BTL4 223 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 UBP1Q9NZI7 540 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 CNTN3Q9P232 1028 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 FNDC3AQ9Y2H6 1198 aaKnown RBP7.34□□□□□ -1.23
GYPA-203ENST00000503627 KCNMB2Q9Y691 235 aa7.34□□□□□ -1.23
GYPA-203ENST00000503627 UBAP1LF5GYI3 381 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 VIL1P09327 827 aaKnown RBP7.33□□□□□ -1.24
GYPA-203ENST00000503627 INPP5BP32019 993 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 TBX4P57082 545 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 HIF1AQ16665 826 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 DDR2Q16832 855 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 TKFCQ3LXA3 575 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 C16orf86Q6ZW13 317 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 CCDC146Q8IYE0 955 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 FAM169BQ8N8A8 192 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 PHC3Q8NDX5 983 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 RHPN1Q8TCX5 695 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 SUSD3Q96L08 255 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 FEZ1Q99689 392 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 PRDM16Q9HAZ2 1276 aa7.33□□□□□ -1.24
GYPA-203ENST00000503627 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.33□□□□□ -1.24
GYPA-203ENST00000503627 SUPT16HQ9Y5B9 1047 aaKnown RBP7.33□□□□□ -1.24
GYPA-203ENST00000503627 SIAH2O43255 324 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 CRKP46108 304 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 VEGFBP49765 207 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 ARSDP51689 593 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 FAM160A1Q05DH4 1040 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 IFRD2Q12894 506 aaPredicted RBP7.32□□□□□ -1.24
GYPA-203ENST00000503627 RASGRF1Q13972 1273 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 TNNI3KQ59H18 835 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 ODR4Q5SWX8 454 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 RC3H1Q5TC82 1133 aaKnown RBP7.32□□□□□ -1.24
GYPA-203ENST00000503627 CCDC81Q6ZN84 652 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 ZNF280CQ8ND82 737 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 RHBDD1Q8TEB9 315 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 PMM1Q92871 262 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 HSH2DQ96JZ2 352 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 ZSCAN10Q96SZ4 725 aaPredicted RBP7.32□□□□□ -1.24
GYPA-203ENST00000503627 PPM1HQ9ULR3 514 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 LEMD3Q9Y2U8 911 aa7.32□□□□□ -1.24
GYPA-203ENST00000503627 RTCBQ9Y3I0 505 aaKnown RBP7.32□□□□□ -1.24
GYPA-203ENST00000503627 PF4P02776 101 aa7.31□□□□□ -1.24
GYPA-203ENST00000503627 HCLS1P14317 486 aaPredicted RBP7.31□□□□□ -1.24
GYPA-203ENST00000503627 APOBRQ0VD83 1088 aa7.31□□□□□ -1.24
GYPA-203ENST00000503627 MAP3K11Q16584 847 aa7.31□□□□□ -1.24
GYPA-203ENST00000503627 KIAA0319Q5VV43 1072 aa7.31□□□□□ -1.24
GYPA-203ENST00000503627 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
GYPA-203ENST00000503627 PDZRN3Q9UPQ7 1066 aa7.31□□□□□ -1.24
GYPA-203ENST00000503627 MEN1O00255 615 aa7.3□□□□□ -1.24
GYPA-203ENST00000503627 PDPK1O15530 556 aa7.3□□□□□ -1.24
GYPA-203ENST00000503627 RLBP1P12271 317 aa7.3□□□□□ -1.24
GYPA-203ENST00000503627 PTGIRP43119 386 aa7.3□□□□□ -1.24
GYPA-203ENST00000503627 PLA2G4AP47712 749 aa7.3□□□□□ -1.24
GYPA-203ENST00000503627 GRIN2CQ14957 1233 aa7.3□□□□□ -1.24
GYPA-203ENST00000503627 C2orf27AQ580R0 203 aa7.3□□□□□ -1.24
GYPA-203ENST00000503627 PRPF40BQ6NWY9 871 aaKnown RBP7.3□□□□□ -1.24
GYPA-203ENST00000503627 NBPF10Q6P3W6 841 aaKnown RBP7.3□□□□□ -1.24
GYPA-203ENST00000503627 SV2BQ7L1I2 683 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms